Csa7G420710 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G420710
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 16130195 .. 16130533 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCATAATCCGCAAAGAACAAAGCAAAGGGCTAGGCGATTTGATACACACGTAGCCACATTTCGTATACTCCTCCCGCCTCGGGCTCGCACTGTGAATTGGGAAACTCGTTTCTCACTGATCTGATGGTGTGGCGATGCCGAAAACAAACTTTAATTTAATCTTCATCTCCTCATTGACCGTACAAACTTCAAAATTTGTGAAACTGAAACAGCAATAGACAAAGCTAATCCCAATTCCAAGAGACAAATTCCACAGATCCTTTGCTCAAATTTGCAGCAAAATCACCGCGACCTGATTGCTATGTCGAGTCGGCCAATCATTACTTTCTCTTAG

mRNA sequence

ATGGAGCATAATCCGCAAAGAACAAAGCAAAGGGCTAGGCGATTTGATACACACGTAGCCACATTTCGTATACTCCTCCCGCCTCGGGCTCGCACTGTGAATTGGGAAACTCCAATAGACAAAGCTAATCCCAATTCCAAGAGACAAATTCCACAGATCCTTTGCTCAAATTTGCAGCAAAATCACCGCGACCTGATTGCTATGTCGAGTCGGCCAATCATTACTTTCTCTTAG

Coding sequence (CDS)

ATGGAGCATAATCCGCAAAGAACAAAGCAAAGGGCTAGGCGATTTGATACACACGTAGCCACATTTCGTATACTCCTCCCGCCTCGGGCTCGCACTGTGAATTGGGAAACTCCAATAGACAAAGCTAATCCCAATTCCAAGAGACAAATTCCACAGATCCTTTGCTCAAATTTGCAGCAAAATCACCGCGACCTGATTGCTATGTCGAGTCGGCCAATCATTACTTTCTCTTAG

Protein sequence

MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQNHRDLIAMSSRPIITFS*
Homology
[Close]
BLAST of Csa7G420710 vs. TrEMBL
Match: A0A0A0K6G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420710 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 5.9e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

Query: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60
          MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ
Sbjct: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60

Query: 61 NHRDLIAMSSRPIITFS 78
          NHRDLIAMSSRPIITFS
Sbjct: 61 NHRDLIAMSSRPIITFS 77

[Close]
BLAST of Csa7G420710 vs. NCBI nr
Match: gi|700189845|gb|KGN45078.1| (hypothetical protein Csa_7G420710 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 8.4e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

Query: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60
          MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ
Sbjct: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60

Query: 61 NHRDLIAMSSRPIITFS 78
          NHRDLIAMSSRPIITFS
Sbjct: 61 NHRDLIAMSSRPIITFS 77

The following BLAST results are available for this feature:
BLAST of Csa7G420710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6G9_CUCSA5.9e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420710 PE=4 SV=1[more]
BLAST of Csa7G420710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189845|gb|KGN45078.1|8.4e-37100.00hypothetical protein Csa_7G420710 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G420710.1Csa7G420710.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G420710Cucumber (Gy14) v1cgycuB177
Csa7G420710Cucurbita maxima (Rimu)cmacuB272
Csa7G420710Cucurbita maxima (Rimu)cmacuB388
Csa7G420710Cucurbita maxima (Rimu)cmacuB496
Csa7G420710Cucurbita maxima (Rimu)cmacuB914
Csa7G420710Cucurbita moschata (Rifu)cmocuB260
Csa7G420710Cucurbita moschata (Rifu)cmocuB378
Csa7G420710Cucurbita moschata (Rifu)cmocuB485
Csa7G420710Cucurbita moschata (Rifu)cmocuB900
Csa7G420710Melon (DHL92) v3.5.1cumeB521
Csa7G420710Melon (DHL92) v3.5.1cumeB551
Csa7G420710Watermelon (Charleston Gray)cuwcgB526
Csa7G420710Watermelon (Charleston Gray)cuwcgB531
Csa7G420710Watermelon (97103) v1cuwmB568
Csa7G420710Watermelon (97103) v1cuwmB574
Csa7G420710Cucurbita pepo (Zucchini)cpecuB161
Csa7G420710Cucurbita pepo (Zucchini)cpecuB343
Csa7G420710Cucurbita pepo (Zucchini)cpecuB589
Csa7G420710Cucurbita pepo (Zucchini)cpecuB633
Csa7G420710Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G420710Bottle gourd (USVL1VR-Ls)culsiB516
Csa7G420710Cucumber (Gy14) v2cgybcuB150
Csa7G420710Cucumber (Gy14) v2cgybcuB323
Csa7G420710Melon (DHL92) v3.6.1cumedB501
Csa7G420710Melon (DHL92) v3.6.1cumedB528
Csa7G420710Silver-seed gourdcarcuB0119
Csa7G420710Silver-seed gourdcarcuB0484
Csa7G420710Silver-seed gourdcarcuB0783
Csa7G420710Silver-seed gourdcarcuB0833
Csa7G420710Watermelon (97103) v2cuwmbB517
Csa7G420710Watermelon (97103) v2cuwmbB572
Csa7G420710Wax gourdcuwgoB650
Csa7G420710Wax gourdcuwgoB704
Csa7G420710Cucumber (Chinese Long) v2cucuB127