Csa7G420150 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G420150
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 16075015 .. 16075466 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACGTAATGCTCTGTCTCAATGCGTATTACAAACGGAAGACGAAGGTCGCCGGCGAAAATTGATCGGAAGTAGGAGACGACTGGCGAAGTTCAACGAGGTCAAGTCAAAGAAAGCTCGACGACTTCGTTCTACCAAGCAGTCGCCTGCTTCGAGGTTTCGCTTTTGTATGTATATATATTTTATTATAGCCTCCGTTCTGAACGCGAGCGACCTGTCATTACTCTGACTGAAGCATTGAGGACTTGTTTCTGTGGAATTTCATATCTGATCAACGGTATGAATCGGTTTCTTCTCATTTTTACTAGCTACCTGTTGAATTGCTGATGCTTTCTCTCTTTAAATGTTAAAGAACATGCATGATTTTGATGTGCAGTGTATTGCTTTACTAGGTCCGCTAAATTAAGCTCAATTTGCTGTCAGTGCGGATTTCGGAGTTTTAGCTTTTGA

mRNA sequence

ATGAAACGTAATGCTCTGTCTCAATGCGTATTACAAACGGAAGACGAAGGTCGCCGGCGAAAATTGATCGGAAGTAGGAGACGACTGGCGAAGTTCAACGAGGTCAAGTCAAAGAAAGCTCGACGACTTCGTTCTACCAAGCAGTCGCCTGCTTCGAGCCTCCGTTCTGAACGCGAGCGACCTGTCATTACTCTGACTGAAGCATTGAGGACTTGTTTCTGTGGAATTTCATATCTGATCAACGTGTATTGCTTTACTAGGTCCGCTAAATTAAGCTCAATTTGCTGTCAGTGCGGATTTCGGAGTTTTAGCTTTTGA

Coding sequence (CDS)

ATGAAACGTAATGCTCTGTCTCAATGCGTATTACAAACGGAAGACGAAGGTCGCCGGCGAAAATTGATCGGAAGTAGGAGACGACTGGCGAAGTTCAACGAGGTCAAGTCAAAGAAAGCTCGACGACTTCGTTCTACCAAGCAGTCGCCTGCTTCGAGCCTCCGTTCTGAACGCGAGCGACCTGTCATTACTCTGACTGAAGCATTGAGGACTTGTTTCTGTGGAATTTCATATCTGATCAACGTGTATTGCTTTACTAGGTCCGCTAAATTAAGCTCAATTTGCTGTCAGTGCGGATTTCGGAGTTTTAGCTTTTGA

Protein sequence

MKRNALSQCVLQTEDEGRRRKLIGSRRRLAKFNEVKSKKARRLRSTKQSPASSLRSERERPVITLTEALRTCFCGISYLINVYCFTRSAKLSSICCQCGFRSFSF*
Homology
[Close]
BLAST of Csa7G420150 vs. TrEMBL
Match: A0A0A0K5X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420150 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.7e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MKRNALSQCVLQTEDEGRRRKLIGSRRRLAKFNEVKSKKARRLRSTKQSPASSLRSERER 60
           MKRNALSQCVLQTEDEGRRRKLIGSRRRLAKFNEVKSKKARRLRSTKQSPASSLRSERER
Sbjct: 1   MKRNALSQCVLQTEDEGRRRKLIGSRRRLAKFNEVKSKKARRLRSTKQSPASSLRSERER 60

Query: 61  PVITLTEALRTCFCGISYLINVYCFTRSAKLSSICCQCGFRSFSF 106
           PVITLTEALRTCFCGISYLINVYCFTRSAKLSSICCQCGFRSFSF
Sbjct: 61  PVITLTEALRTCFCGISYLINVYCFTRSAKLSSICCQCGFRSFSF 105

[Close]
BLAST of Csa7G420150 vs. NCBI nr
Match: gi|700189837|gb|KGN45070.1| (hypothetical protein Csa_7G420150 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 9.6e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MKRNALSQCVLQTEDEGRRRKLIGSRRRLAKFNEVKSKKARRLRSTKQSPASSLRSERER 60
           MKRNALSQCVLQTEDEGRRRKLIGSRRRLAKFNEVKSKKARRLRSTKQSPASSLRSERER
Sbjct: 1   MKRNALSQCVLQTEDEGRRRKLIGSRRRLAKFNEVKSKKARRLRSTKQSPASSLRSERER 60

Query: 61  PVITLTEALRTCFCGISYLINVYCFTRSAKLSSICCQCGFRSFSF 106
           PVITLTEALRTCFCGISYLINVYCFTRSAKLSSICCQCGFRSFSF
Sbjct: 61  PVITLTEALRTCFCGISYLINVYCFTRSAKLSSICCQCGFRSFSF 105

The following BLAST results are available for this feature:
BLAST of Csa7G420150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5X5_CUCSA6.7e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420150 PE=4 SV=1[more]
BLAST of Csa7G420150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189837|gb|KGN45070.1|9.6e-52100.00hypothetical protein Csa_7G420150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006556 S-adenosylmethionine biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004478 methionine adenosyltransferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU107288cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G420150.1Csa7G420150.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU107288CU107288transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G420150CSPI07G18680Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G420150Watermelon (97103) v2cuwmbB517
Csa7G420150Watermelon (97103) v2cuwmbB572
Csa7G420150Wax gourdcuwgoB650
Csa7G420150Wax gourdcuwgoB704
Csa7G420150Cucumber (Gy14) v1cgycuB177
Csa7G420150Cucurbita maxima (Rimu)cmacuB272
Csa7G420150Cucurbita maxima (Rimu)cmacuB388
Csa7G420150Cucurbita maxima (Rimu)cmacuB496
Csa7G420150Cucurbita maxima (Rimu)cmacuB914
Csa7G420150Cucurbita moschata (Rifu)cmocuB260
Csa7G420150Cucurbita moschata (Rifu)cmocuB378
Csa7G420150Cucurbita moschata (Rifu)cmocuB485
Csa7G420150Cucurbita moschata (Rifu)cmocuB900
Csa7G420150Melon (DHL92) v3.5.1cumeB521
Csa7G420150Watermelon (Charleston Gray)cuwcgB526
Csa7G420150Watermelon (Charleston Gray)cuwcgB531
Csa7G420150Watermelon (97103) v1cuwmB568
Csa7G420150Watermelon (97103) v1cuwmB574
Csa7G420150Cucurbita pepo (Zucchini)cpecuB161
Csa7G420150Cucurbita pepo (Zucchini)cpecuB343
Csa7G420150Cucurbita pepo (Zucchini)cpecuB589
Csa7G420150Cucurbita pepo (Zucchini)cpecuB633
Csa7G420150Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G420150Bottle gourd (USVL1VR-Ls)culsiB516
Csa7G420150Cucumber (Gy14) v2cgybcuB323
Csa7G420150Melon (DHL92) v3.6.1cumedB501
Csa7G420150Silver-seed gourdcarcuB0119
Csa7G420150Silver-seed gourdcarcuB0484
Csa7G420150Silver-seed gourdcarcuB0783
Csa7G420150Silver-seed gourdcarcuB0833