Csa7G394050 (gene) Cucumber (Chinese Long) v2

NameCsa7G394050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 15000213 .. 15000554 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCAATAATCAAATATTTAGTTTCCATAGCACTTGTAGCTACCCTTCTGTTGCTCTCCAAACCTGTATCGACTTTTGTCGTTGATCACGAGGAGATTTCTAATTCTAATAACATAATGCTTCTACGAAAGTCCCTCCAAGTGACAGATGGTCATCAAATTGCGAATGGATATCAAAACTCTCTTAAAGACGAAGATACCAAAAAAGATGAGCATAAAGAACCACCAAAGAAAGCTCATTGTCCAAATAAAAAATCGCTAGCCAATCGAGGTGGAACGATGCTATTTGGGGTTGGATCTTTACTTTGTTTTAGTATTGTTTATGGTCTATTTATTTGA

mRNA sequence

ATGGGGGCAATAATCAAATATTTAGTTTCCATAGCACTTGTAGCTACCCTTCTGTTGCTCTCCAAACCTGTATCGACTTTTGTCGTTGATCACGAGGAGATTTCTAATTCTAATAACATAATGCTTCTACGAAAGTCCCTCCAAGTGACAGATGGTCATCAAATTGCGAATGGATATCAAAACTCTCTTAAAGACGAAGATACCAAAAAAGATGAGCATAAAGAACCACCAAAGAAAGCTCATTGTCCAAATAAAAAATCGCTAGCCAATCGAGGTGGAACGATGCTATTTGGGGTTGGATCTTTACTTTGTTTTAGTATTGTTTATGGTCTATTTATTTGA

Coding sequence (CDS)

ATGGGGGCAATAATCAAATATTTAGTTTCCATAGCACTTGTAGCTACCCTTCTGTTGCTCTCCAAACCTGTATCGACTTTTGTCGTTGATCACGAGGAGATTTCTAATTCTAATAACATAATGCTTCTACGAAAGTCCCTCCAAGTGACAGATGGTCATCAAATTGCGAATGGATATCAAAACTCTCTTAAAGACGAAGATACCAAAAAAGATGAGCATAAAGAACCACCAAAGAAAGCTCATTGTCCAAATAAAAAATCGCTAGCCAATCGAGGTGGAACGATGCTATTTGGGGTTGGATCTTTACTTTGTTTTAGTATTGTTTATGGTCTATTTATTTGA

Protein sequence

MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQNSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI*
BLAST of Csa7G394050 vs. TrEMBL
Match: A0A0A0K580_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394050 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1

Query: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ 60
           MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ
Sbjct: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ 60

Query: 61  NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI 114
           NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI
Sbjct: 61  NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI 113

BLAST of Csa7G394050 vs. TrEMBL
Match: A0A0A0K5W7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394030 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.7e-30
Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 1

Query: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ 60
           MGAIIK  V +A+V  LLLLSKP+ST  VDH+EISNSNN +L R  +Q T+ H++ NGYQ
Sbjct: 1   MGAIIKLFVYVAIVVALLLLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQ 60

Query: 61  NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLL 104
            S+KDEDT +D HK+  KKAHC NKKSLANR GTMLFGVG L+
Sbjct: 61  YSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVGPLV 103

BLAST of Csa7G394050 vs. NCBI nr
Match: gi|700189652|gb|KGN44885.1| (hypothetical protein Csa_7G394050 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1

Query: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ 60
           MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ
Sbjct: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ 60

Query: 61  NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI 114
           NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI
Sbjct: 61  NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLFI 113

BLAST of Csa7G394050 vs. NCBI nr
Match: gi|700189650|gb|KGN44883.1| (hypothetical protein Csa_7G394030 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 3.8e-30
Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 1

Query: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIANGYQ 60
           MGAIIK  V +A+V  LLLLSKP+ST  VDH+EISNSNN +L R  +Q T+ H++ NGYQ
Sbjct: 1   MGAIIKLFVYVAIVVALLLLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVGNGYQ 60

Query: 61  NSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLL 104
            S+KDEDT +D HK+  KKAHC NKKSLANR GTMLFGVG L+
Sbjct: 61  YSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVGPLV 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K580_CUCSA1.7e-56100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394050 PE=4 SV=1[more]
A0A0A0K5W7_CUCSA2.7e-3066.02Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394030 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700189652|gb|KGN44885.1|2.4e-56100.00hypothetical protein Csa_7G394050 [Cucumis sativus][more]
gi|700189650|gb|KGN44883.1|3.8e-3066.02hypothetical protein Csa_7G394030 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU085616cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G394050.1Csa7G394050.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU085616CU085616transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None