Csa7G388320 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G388320
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 14365411 .. 14365641 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCCGCGAATGAGCTATAAGACCGTTGGCCTAACTTTCAACTCTTTTTCCTTGGCTCCTTTGCTTCTCGATTGGACTTCTTTCGATCGAGAAATCAGCCAATTCGTGCCTTGGAGAATGAATGAGGATCCGATATCTTCGCTCGATGACCCAACTTCCTCCAAGAAAAATGGGGATGAAACTCCTATGTCATGCCACTACTTTCAATTATTATCTGAATTACATTGA

mRNA sequence

ATGGTTCCGCGAATGAGCTATAAGACCGTTGGCCTAACTTTCAACTCTTTTTCCTTGGCTCCTTTGCTTCTCGATTGGACTTCTTTCGATCGAGAAATCAGCCAATTCGTGCCTTGGAGAATGAATGAGGATCCGATATCTTCGCTCGATGACCCAACTTCCTCCAAGAAAAATGGGGATGAAACTCCTATGTCATGCCACTACTTTCAATTATTATCTGAATTACATTGA

Coding sequence (CDS)

ATGGTTCCGCGAATGAGCTATAAGACCGTTGGCCTAACTTTCAACTCTTTTTCCTTGGCTCCTTTGCTTCTCGATTGGACTTCTTTCGATCGAGAAATCAGCCAATTCGTGCCTTGGAGAATGAATGAGGATCCGATATCTTCGCTCGATGACCCAACTTCCTCCAAGAAAAATGGGGATGAAACTCCTATGTCATGCCACTACTTTCAATTATTATCTGAATTACATTGA

Protein sequence

MVPRMSYKTVGLTFNSFSLAPLLLDWTSFDREISQFVPWRMNEDPISSLDDPTSSKKNGDETPMSCHYFQLLSELH*
Homology
[Close]
BLAST of Csa7G388320 vs. TrEMBL
Match: A0A0A0K7B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388320 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.4e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MVPRMSYKTVGLTFNSFSLAPLLLDWTSFDREISQFVPWRMNEDPISSLDDPTSSKKNGD 60
          MVPRMSYKTVGLTFNSFSLAPLLLDWTSFDREISQFVPWRMNEDPISSLDDPTSSKKNGD
Sbjct: 1  MVPRMSYKTVGLTFNSFSLAPLLLDWTSFDREISQFVPWRMNEDPISSLDDPTSSKKNGD 60

Query: 61 ETPMSCHYFQLLSELH 77
          ETPMSCHYFQLLSELH
Sbjct: 61 ETPMSCHYFQLLSELH 76

[Close]
BLAST of Csa7G388320 vs. NCBI nr
Match: gi|700189566|gb|KGN44799.1| (hypothetical protein Csa_7G388320 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 4.9e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MVPRMSYKTVGLTFNSFSLAPLLLDWTSFDREISQFVPWRMNEDPISSLDDPTSSKKNGD 60
          MVPRMSYKTVGLTFNSFSLAPLLLDWTSFDREISQFVPWRMNEDPISSLDDPTSSKKNGD
Sbjct: 1  MVPRMSYKTVGLTFNSFSLAPLLLDWTSFDREISQFVPWRMNEDPISSLDDPTSSKKNGD 60

Query: 61 ETPMSCHYFQLLSELH 77
          ETPMSCHYFQLLSELH
Sbjct: 61 ETPMSCHYFQLLSELH 76

The following BLAST results are available for this feature:
BLAST of Csa7G388320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7B7_CUCSA3.4e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388320 PE=4 SV=1[more]
BLAST of Csa7G388320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189566|gb|KGN44799.1|4.9e-37100.00hypothetical protein Csa_7G388320 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU135566cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G388320.1Csa7G388320.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU135566CU135566transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G388320Cucurbita pepo (Zucchini)cpecuB161
Csa7G388320Cucurbita pepo (Zucchini)cpecuB344
Csa7G388320Cucurbita pepo (Zucchini)cpecuB348
Csa7G388320Bottle gourd (USVL1VR-Ls)culsiB487
Csa7G388320Bottle gourd (USVL1VR-Ls)culsiB498
Csa7G388320Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G388320Cucumber (Gy14) v2cgybcuB090
Csa7G388320Cucumber (Gy14) v2cgybcuB323
Csa7G388320Cucumber (Gy14) v2cgybcuB326
Csa7G388320Melon (DHL92) v3.6.1cumedB502
Csa7G388320Silver-seed gourdcarcuB0057
Csa7G388320Silver-seed gourdcarcuB0120
Csa7G388320Silver-seed gourdcarcuB0356
Csa7G388320Silver-seed gourdcarcuB0773
Csa7G388320Watermelon (97103) v2cuwmbB534
Csa7G388320Watermelon (97103) v2cuwmbB547
Csa7G388320Watermelon (97103) v2cuwmbB553
Csa7G388320Watermelon (97103) v2cuwmbB571
Csa7G388320Wax gourdcuwgoB696
Csa7G388320Wax gourdcuwgoB708
Csa7G388320Cucumber (Chinese Long) v2cucuB082
Csa7G388320Cucumber (Chinese Long) v2cucuB175
Csa7G388320Cucumber (Gy14) v1cgycuB085
Csa7G388320Cucumber (Gy14) v1cgycuB186
Csa7G388320Cucurbita maxima (Rimu)cmacuB202
Csa7G388320Cucurbita maxima (Rimu)cmacuB388
Csa7G388320Cucurbita maxima (Rimu)cmacuB914
Csa7G388320Cucurbita maxima (Rimu)cmacuB918
Csa7G388320Cucurbita moschata (Rifu)cmocuB187
Csa7G388320Cucurbita moschata (Rifu)cmocuB378
Csa7G388320Cucurbita moschata (Rifu)cmocuB900
Csa7G388320Cucurbita moschata (Rifu)cmocuB904
Csa7G388320Melon (DHL92) v3.5.1cumeB522
Csa7G388320Melon (DHL92) v3.5.1cumeB557
Csa7G388320Watermelon (Charleston Gray)cuwcgB525
Csa7G388320Watermelon (Charleston Gray)cuwcgB551
Csa7G388320Watermelon (Charleston Gray)cuwcgB562
Csa7G388320Watermelon (97103) v1cuwmB567
Csa7G388320Watermelon (97103) v1cuwmB608
Csa7G388320Watermelon (97103) v1cuwmB614