Csa7G374680 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G374680
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 13618429 .. 13619103 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCACGTTTCCCACCAAAATTTCTCTACTTTCTATCACCCAATTGGATTTCCGTTTCTAAATTCGGTTCCCAAGAGGCTCAGACGACGGATTTGGGGATTCCACTTAGTCAGAAGACTCGGTTAGCACTTTTTTCAGTTTGAACCCTAATTTTCTTGTTGAAACTGGAAGGTATTTTTGTTTTTCTTTTTATGGATTTTCTGAGATTTGTTTCTTCTGCTGGCTTCCTTTGTTTAATCTATGATTAAAAGTTTTTTTTTTTTTTTCCTTTTGTTTCTTCTGATCGTTGACTATTTCTTTTTTGGTGGGGATTCTTGGAATTGAATGTTGGAATGATAAACTCTTTTTACCTTTACTCAAATAGGCTGTATTTTTTGTAATATTGTTGTTGTGATATCTGACCCACGACAGTGGCTTTATCTTAATGTTTGAATCTGTGTTCGAACCAAACTGTTTGGACTTATTTACCGTACAAGAGGAATACCCAGTTTAATATAGAAGAAAAAGAAACAATTTCTCACTTGTCTCTAAGTTATTGCCTGCTATATTCTAGGTATGAACGGGTCTGTTTCCACCAGTTGTACTACCTCTTCAAGTTGCAGTTTCATTGGATTGTTGGATTGGATTATTGGAACTTCAAGACCTATTCATAGTAGGAGGGGTTTGAGTTGA

mRNA sequence

ATGCTGCACGTTTCCCACCAAAATTTCTCTACTTTCTATCACCCAATTGGATTTCCGTTTCTAAATTCGGTTCCCAAGAGGCTCAGACGACGGATTTGGGGATTCCACTTAGTCAGAAGACTCGGTATGAACGGGTCTGTTTCCACCAGTTGTACTACCTCTTCAAGTTGCAGTTTCATTGGATTGTTGGATTGGATTATTGGAACTTCAAGACCTATTCATAGTAGGAGGGGTTTGAGTTGA

Coding sequence (CDS)

ATGCTGCACGTTTCCCACCAAAATTTCTCTACTTTCTATCACCCAATTGGATTTCCGTTTCTAAATTCGGTTCCCAAGAGGCTCAGACGACGGATTTGGGGATTCCACTTAGTCAGAAGACTCGGTATGAACGGGTCTGTTTCCACCAGTTGTACTACCTCTTCAAGTTGCAGTTTCATTGGATTGTTGGATTGGATTATTGGAACTTCAAGACCTATTCATAGTAGGAGGGGTTTGAGTTGA

Protein sequence

MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFIGLLDWIIGTSRPIHSRRGLS*
Homology
[Close]
BLAST of Csa7G374680 vs. TrEMBL
Match: A0A0A0K4T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374680 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-40
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI 60
          MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI
Sbjct: 1  MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI 60

Query: 61 GLLDWIIGTSRPIHSRRGLS 81
          GLLDWIIGTSRPIHSRRGLS
Sbjct: 61 GLLDWIIGTSRPIHSRRGLS 80

[Close]
BLAST of Csa7G374680 vs. NCBI nr
Match: gi|700189492|gb|KGN44725.1| (hypothetical protein Csa_7G374680 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI 60
          MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI
Sbjct: 1  MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI 60

Query: 61 GLLDWIIGTSRPIHSRRGLS 81
          GLLDWIIGTSRPIHSRRGLS
Sbjct: 61 GLLDWIIGTSRPIHSRRGLS 80

The following BLAST results are available for this feature:
BLAST of Csa7G374680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4T3_CUCSA7.7e-40100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374680 PE=4 SV=1[more]
BLAST of Csa7G374680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189492|gb|KGN44725.1|1.1e-39100.00hypothetical protein Csa_7G374680 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU140471cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G374680.1Csa7G374680.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU140471CU140471transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G374680CmaCh17G013370Cucurbita maxima (Rimu)cmacuB384
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G374680Watermelon (97103) v2cuwmbB571
Csa7G374680Wax gourdcuwgoB705
Csa7G374680Cucumber (Gy14) v1cgycuB545
Csa7G374680Cucurbita maxima (Rimu)cmacuB914
Csa7G374680Cucurbita moschata (Rifu)cmocuB374
Csa7G374680Cucurbita moschata (Rifu)cmocuB900
Csa7G374680Melon (DHL92) v3.5.1cumeB522
Csa7G374680Melon (DHL92) v3.5.1cumeB538
Csa7G374680Watermelon (Charleston Gray)cuwcgB525
Csa7G374680Watermelon (97103) v1cuwmB567
Csa7G374680Cucurbita pepo (Zucchini)cpecuB157
Csa7G374680Cucurbita pepo (Zucchini)cpecuB344
Csa7G374680Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G374680Cucumber (Gy14) v2cgybcuB323
Csa7G374680Melon (DHL92) v3.6.1cumedB502
Csa7G374680Melon (DHL92) v3.6.1cumedB518
Csa7G374680Silver-seed gourdcarcuB0013
Csa7G374680Silver-seed gourdcarcuB0095