Csa7G368160 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G368160
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 13030832 .. 13031600 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAACAGCAAACAAAAACCAACTCAGGACAACAAACCCCAAATTCCGCCGCTGAATTCCGGGAACGCCAGCTTTGTCAAGACCCGACGCCTTGGGGGTAGGCGCAGCAGCAGTTTCATTAACACCGCCAACCACCGAAGTGGAAGGTGCAGCAGACGCGCCACCATGATCAGGGCGTGGAGCAGGACTTGGAGTACCAACAGGACTAACACTTCCGTCAAACACCAACACGCCTCTTGATTTCAAATTATCCGGTTTAAACTCATGCACTGCTGGAACACCCATACTGGAATCCACCGACGCCCCAACTTGCCAAACTTGGTTCAACGACGAAGACTTCTCCGGCACTTTCACGGTAACGAAGATCGCAAACAAATCGTCGGAAGATTGGGATGCAAGGTCCCAGAAGGGAAAGGAGAGCGTGGGGGAAGGACGAACGGAGTTATAAGAAGTAATGTTGAAAGTACGGACAGTGAGGGATTTGGTGAAGAAAGCGGCGAGGAAGGCTTGGGATCCAGCCATGCCGGTGGCGGTGGGGTTGACGGCCCAGGCGACCCAACCGGCGGTTGTGGGGGGAGGGGCGAGGAAGGCGATGGAGAGAGAGGAATTTTTGGGATTGTAAGACCAGTGGAGGAAGGCGTGGAGATAGGGGAGATCTTGGCAATTGGTGAAGGTTCTGTTTGGGAAGGATTGGGAAGAGCAAGTGAGGGAATGGGAGATGGAAAGGGAAGAGGAAATTAGGGTAAGGAAGAGGAAGAAAGTGGAGAA

mRNA sequence

ATGCACTGCTGGAACACCCATACTGGAATCCACCGACGCCCCAACTTGCCAAACTTGGTTCAACGACGAAGACTTCTCCGGCACTTTCACGGTAACGAAGATCGCAAACAAATCGTCGGAAGATTGGGATGCAAGGTCCCAGAAGGGAAAGGAGAGCGTGGGGGAAGGACGAACGGAGTTATAAGAAGTAATGTTGAAAGTACGGACAGTGAGGGATTTGGTGAAGAAAGCGGCGAGGAAGGCTTGGGATCCAGCCATGCCGGTGGCGGTGGGGTTGACGGCCCAGGCGACCCAACCGGCGGTTGTGGGGGGAGGGGCGAGGAAGGCGATGGAGAGAGAGGAATTTTTGGGATTGTAAGACCAGTGGAGGAAGGCGTGGAGATAGGGGAGATCTTGGCAATTGGTGAAGGTTCTGTTTGGGAAGGATTGGGAAGAGCAAGTGAGGGAATGGGAGATGGAAAGGGAAGAGGAAATTAG

Coding sequence (CDS)

ATGCACTGCTGGAACACCCATACTGGAATCCACCGACGCCCCAACTTGCCAAACTTGGTTCAACGACGAAGACTTCTCCGGCACTTTCACGGTAACGAAGATCGCAAACAAATCGTCGGAAGATTGGGATGCAAGGTCCCAGAAGGGAAAGGAGAGCGTGGGGGAAGGACGAACGGAGTTATAAGAAGTAATGTTGAAAGTACGGACAGTGAGGGATTTGGTGAAGAAAGCGGCGAGGAAGGCTTGGGATCCAGCCATGCCGGTGGCGGTGGGGTTGACGGCCCAGGCGACCCAACCGGCGGTTGTGGGGGGAGGGGCGAGGAAGGCGATGGAGAGAGAGGAATTTTTGGGATTGTAAGACCAGTGGAGGAAGGCGTGGAGATAGGGGAGATCTTGGCAATTGGTGAAGGTTCTGTTTGGGAAGGATTGGGAAGAGCAAGTGAGGGAATGGGAGATGGAAAGGGAAGAGGAAATTAG

Protein sequence

MHCWNTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGVIRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVRPVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRGN*
Homology
[Close]
BLAST of Csa7G368160 vs. TrEMBL
Match: A0A0A0K6W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368160 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.2e-89
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MHCWNTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGV 60
           MHCWNTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGV
Sbjct: 1   MHCWNTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGV 60

Query: 61  IRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVR 120
           IRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVR
Sbjct: 61  IRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVR 120

Query: 121 PVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRGN 159
           PVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRGN
Sbjct: 121 PVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRGN 158

[Close]
BLAST of Csa7G368160 vs. NCBI nr
Match: gi|700189431|gb|KGN44664.1| (hypothetical protein Csa_7G368160 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.7e-89
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MHCWNTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGV 60
           MHCWNTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGV
Sbjct: 1   MHCWNTHTGIHRRPNLPNLVQRRRLLRHFHGNEDRKQIVGRLGCKVPEGKGERGGRTNGV 60

Query: 61  IRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVR 120
           IRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVR
Sbjct: 61  IRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEEGDGERGIFGIVR 120

Query: 121 PVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRGN 159
           PVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRGN
Sbjct: 121 PVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRGN 158

The following BLAST results are available for this feature:
BLAST of Csa7G368160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6W3_CUCSA1.2e-89100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368160 PE=4 SV=1[more]
BLAST of Csa7G368160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189431|gb|KGN44664.1|1.7e-89100.00hypothetical protein Csa_7G368160 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU160765cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G368160.1Csa7G368160.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU160765CU160765transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G368160Bhi09G001041Wax gourdcuwgoB705
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G368160Watermelon (97103) v2cuwmbB571
Csa7G368160Cucumber (Gy14) v1cgycuB545
Csa7G368160Cucurbita maxima (Rimu)cmacuB384
Csa7G368160Cucurbita maxima (Rimu)cmacuB914
Csa7G368160Cucurbita moschata (Rifu)cmocuB374
Csa7G368160Cucurbita moschata (Rifu)cmocuB900
Csa7G368160Melon (DHL92) v3.5.1cumeB523
Csa7G368160Watermelon (Charleston Gray)cuwcgB525
Csa7G368160Watermelon (97103) v1cuwmB567
Csa7G368160Cucurbita pepo (Zucchini)cpecuB157
Csa7G368160Cucurbita pepo (Zucchini)cpecuB337
Csa7G368160Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G368160Cucumber (Gy14) v2cgybcuB323
Csa7G368160Melon (DHL92) v3.6.1cumedB502
Csa7G368160Silver-seed gourdcarcuB0013
Csa7G368160Silver-seed gourdcarcuB0095