Csa7G305880 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAACAGCTGCAACGAACTATTTGTTGGATTCTGGAGTCCACTGGGGAGCTGCTCCTGCAGTTAAAGTAAGTATGCTCCACTCGAGTGTTCGCATGAGTGATCCTATTGATAGCACCACCTCTTATTTTCGTTATTTAATAATCAGCACCTAAAACGAGTGCACTTTGTTCTTTTCTTTTCTTTGCTCTTTTTTTTCTTTTTTTTTAATTTTTGCAGGGTGTGCGTGATGCAGCTGTAGAGCTACTCCACACTCTTGTGTCTGTCCATGCTGAGGTAATCTTATCATCAATTTAGGATAATACCAAAGCTATGTGCAAGAAGCGAACAATTGCATTCTCATTGTTCAGATTTTCTTCCGTATGTTATAACTATTTTAAGTATGTGCTCTTTCTAATTCTTTTATGCTATCCTGATGGTGTTATTTCCCTTGTCAAAAGGCTCCCACACTTTTCTTGTTCTCATTCCATTTAGGTCTTTCCTTCGTTCTAATTAGTACTTCTGGCTTGTTGACTCCTATAGTCTCAATTTTAATACATTGTTTCAGGTTTTTGCTGGTTGTAAGCCCCTTTTGGACAAGACACTAGGCATTCTTGTTGAAGGTTTAATTGATACTTTTCTCAGTATCTTTGATGAAAATGGAACAAACGAGCTACGGTCACTGGATACAAACGGTTTCTGTCAACTCATGCTTGAGGTAAAAGTAATGTTTAACACTAGGGGAGGGAAATCTGCGTTAGCGTACAAATCTGGTCAAATGTAGGATGTTTTTCATGTATTTATATTTCAGTTACGGTAGACGGTAGTGGAAAGAAAAAACGAACTGTTGGTCTGTATCAACCGCAACCAAATAAATAAATTGTCCATCCTCCAATTCCAACAGGAAAAATATGGTAAAATAACAAGTAGCTGAAGGAAAAATGCCCTGTACCTTACGTCCCTTTTTCGTTCAATAGGGCATTTATGATAGTTAATGTGCATTGGAGCAGTTTCATTTAGAAGGTTAACCTGTAATGGTATTTGATGCTTTGTGTTCCTTTCGCAGCTTGAGTACTTTGAGACTATATTAAATCCTTATTTCACATCCGACGCTAGAGAGTCTTTGAAGTCTTTGCAAGGAGTGCTTTTGGAGAAAGCTACTGAAAGTGTGGCAGAAGCAGCTGATAATCCAGGCCATAATCGTCGGCCAACTCGTGGGAGTGAGGAAGCTATAGATGAACGACAACAAGGAGCAACTGCCCCAGATGAACTCATTGTAAGGATCATCTTTTTACATTACATTCTTGTACCATGTTAAACTTCAAAAAAAAAAAAAAATCTCGATACCTCTTTATCATTTTAGATTTGGGAGAATTTTTTCATTTTAGTCTCTTTTCAACATGTAGCACTTCCCTGGGTGCATGTTATATTTGGTCAATGGTAACTTATATGATATGATATTTGGCGATATGATATACGGTATCAAAGCCAATACTCTAGAAACAAACATTTGGTCCAAACACAAAATTGGGATTAGACACGAGTTGTGAACCCAAAGAGGTAAGCATCTTCAGTGGACATGTTGAGGATCTCACATTGGAAAAATCAAGGGACCTCACAATCTTAATAAGATAGATTAAAGATAGATGAACTCCTTCTCTCATTGTCAATTGATTGTGAGATGGAATTATCTAATGTTAAAAGATTCAAAGGAATTAGAAGCTTATCGTTTGCTCATTTTAAAATTTACTCATGTACTACCATGAGGTTAACCTAGTGGTAAATAGGGGAATGACCTTAATGGTAATGAGTTCAATCAATAGTGGCCACCTATGTAGGATTTAATATCCTACCAGTTTTCTTGGCACTTTAATGTTCTAGGGTCAGACAACTTGTCCTTTAAAAGAAACAGAATACTGGGAGCTTAAAAAAAAAATTAGGTGTAAAAGACTAGATTGAAAGAACAAAAAAAGAAGGCTTGGTCATTTCTCTAATTTATAGTGAAATGGTTTGAAAAGTAGGAGTGGGAGGTACATCAACGTCTAGAATTAATATCATTTTACCAATTGCGAGATGGTAGTTGGTTCATGTCAACCATGTCTTTTCTTTTACAACAGATCTGTGCATTTGGCTATAGTCGAATATCTTTTCCATGTTACAGGCACTGGCGCAGCAGTACAGCACAGAATTGCTTCAACAAGAGCTTGAGAGAACACGAATAAACACTGCTTGCTTCGCAGAGTCAATTCCATTGGATTCAGTTCCTGAACCTGCCAAGGCAGCTTACACTTCATTTAATGCCACTTATAGAGGAAGCACAACTCCCACTGGGTCTCCAAGTTTCTCATCCCGTAGCAGGCGTCGCTTGTAGCGTTATTCTTGTTTGTTTGATGGATTTTCCATGTCAATGCACGACTACTTTTTGGTTTCCTTCATTCTTGTAAGTAATTAAATCTTCATTGGTAATCCTAGTATAATTTTTTCCATGGTCAGTCTTTGCTGTATGATTTGTTTATTATTTTTTTCCAGTGATGTGGCAGTGTTCATATTTTTGTCCTGAGTTTTATGCAACTTTTTTCAACAAATATTTGTGTTAACAATATGTTTGATTTCCTCGGTTATATGCAGTTATTGCTGCCTACTTTCCATCTTAGAAATATCCAATCTTAGACTGCCTTAAATTTTGAAAATTTGCTGGCTTGTCATCGATAATTTTTCAAAAATGATTCATGGTTTAGTTTTCTTTCATTTAATCTATGGTGTGCTGAAACACTGAATGGGTAAACCATCCTGAACTCGTTGAGGGTTCGGATGTGAGCCAAAGTTTGGTGTCTTTATAGTT ATGAGAACAGCTGCAACGAACTATTTGTTGGATTCTGGAGTCCACTGGGGAGCTGCTCCTGCAGTTAAAGGTGTGCGTGATGCAGCTGTAGAGCTACTCCACACTCTTGTGTCTGTCCATGCTGAGGTTTTTGCTGGTTGTAAGCCCCTTTTGGACAAGACACTAGGCATTCTTGTTGAAGGTTTAATTGATACTTTTCTCAGTATCTTTGATGAAAATGGAACAAACGAGCTACGGTCACTGGATACAAACGGTTTCTGTCAACTCATGCTTGAGCTTGAGTACTTTGAGACTATATTAAATCCTTATTTCACATCCGACGCTAGAGAGTCTTTGAAGTCTTTGCAAGGAGTGCTTTTGGAGAAAGCTACTGAAAGTGTGGCAGAAGCAGCTGATAATCCAGGCCATAATCGTCGGCCAACTCGTGGGAGTGAGGAAGCTATAGATGAACGACAACAAGGAGCAACTGCCCCAGATGAACTCATTGCACTGGCGCAGCAGTACAGCACAGAATTGCTTCAACAAGAGCTTGAGAGAACACGAATAAACACTGCTTGCTTCGCAGAGTCAATTCCATTGGATTCAGTTCCTGAACCTGCCAAGGCAGCTTACACTTCATTTAATGCCACTTATAGAGGAAGCACAACTCCCACTGGGTCTCCAAGTTTCTCATCCCGTAGCAGGCGTCGCTTGTAG ATGAGAACAGCTGCAACGAACTATTTGTTGGATTCTGGAGTCCACTGGGGAGCTGCTCCTGCAGTTAAAGGTGTGCGTGATGCAGCTGTAGAGCTACTCCACACTCTTGTGTCTGTCCATGCTGAGGTTTTTGCTGGTTGTAAGCCCCTTTTGGACAAGACACTAGGCATTCTTGTTGAAGGTTTAATTGATACTTTTCTCAGTATCTTTGATGAAAATGGAACAAACGAGCTACGGTCACTGGATACAAACGGTTTCTGTCAACTCATGCTTGAGCTTGAGTACTTTGAGACTATATTAAATCCTTATTTCACATCCGACGCTAGAGAGTCTTTGAAGTCTTTGCAAGGAGTGCTTTTGGAGAAAGCTACTGAAAGTGTGGCAGAAGCAGCTGATAATCCAGGCCATAATCGTCGGCCAACTCGTGGGAGTGAGGAAGCTATAGATGAACGACAACAAGGAGCAACTGCCCCAGATGAACTCATTGCACTGGCGCAGCAGTACAGCACAGAATTGCTTCAACAAGAGCTTGAGAGAACACGAATAAACACTGCTTGCTTCGCAGAGTCAATTCCATTGGATTCAGTTCCTGAACCTGCCAAGGCAGCTTACACTTCATTTAATGCCACTTATAGAGGAAGCACAACTCCCACTGGGTCTCCAAGTTTCTCATCCCGTAGCAGGCGTCGCTTGTAG MRTAATNYLLDSGVHWGAAPAVKGVRDAAVELLHTLVSVHAEVFAGCKPLLDKTLGILVEGLIDTFLSIFDENGTNELRSLDTNGFCQLMLELEYFETILNPYFTSDARESLKSLQGVLLEKATESVAEAADNPGHNRRPTRGSEEAIDERQQGATAPDELIALAQQYSTELLQQELERTRINTACFAESIPLDSVPEPAKAAYTSFNATYRGSTTPTGSPSFSSRSRRRL*
BLAST of Csa7G305880 vs. Swiss-Prot
Match: SEC5A_ARATH (Exocyst complex component SEC5A OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.0e-82 Identity = 157/237 (66.24%), Postives = 189/237 (79.75%), Query Frame = 1
BLAST of Csa7G305880 vs. Swiss-Prot
Match: SEC5B_ARATH (Exocyst complex component SEC5B OS=Arabidopsis thaliana GN=SEC5B PE=1 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.3e-80 Identity = 158/237 (66.67%), Postives = 187/237 (78.90%), Query Frame = 1
BLAST of Csa7G305880 vs. TrEMBL
Match: A0A0A0K468_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G305880 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 3.4e-125 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Csa7G305880 vs. TrEMBL
Match: A0A061FI40_THECC (Exocyst complex component sec5 isoform 1 OS=Theobroma cacao GN=TCM_035548 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 7.7e-93 Identity = 181/238 (76.05%), Postives = 205/238 (86.13%), Query Frame = 1
BLAST of Csa7G305880 vs. TrEMBL
Match: A0A067GYI9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001404mg PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.3e-92 Identity = 185/247 (74.90%), Postives = 204/247 (82.59%), Query Frame = 1
BLAST of Csa7G305880 vs. TrEMBL
Match: V4V6N3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000108mg PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.3e-92 Identity = 185/247 (74.90%), Postives = 204/247 (82.59%), Query Frame = 1
BLAST of Csa7G305880 vs. TrEMBL
Match: A0A067H838_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001404mg PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.3e-92 Identity = 185/247 (74.90%), Postives = 204/247 (82.59%), Query Frame = 1
BLAST of Csa7G305880 vs. TAIR10
Match: AT1G76850.1 (AT1G76850.1 exocyst complex component sec5) HSP 1 Score: 306.2 bits (783), Expect = 1.7e-83 Identity = 157/237 (66.24%), Postives = 189/237 (79.75%), Query Frame = 1
BLAST of Csa7G305880 vs. TAIR10
Match: AT1G21170.1 (AT1G21170.1 Exocyst complex component SEC5) HSP 1 Score: 300.8 bits (769), Expect = 7.1e-82 Identity = 158/237 (66.67%), Postives = 187/237 (78.90%), Query Frame = 1
BLAST of Csa7G305880 vs. NCBI nr
Match: gi|449443834|ref|XP_004139681.1| (PREDICTED: exocyst complex component SEC5A isoform X1 [Cucumis sativus]) HSP 1 Score: 455.7 bits (1171), Expect = 4.9e-125 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Csa7G305880 vs. NCBI nr
Match: gi|778726545|ref|XP_011659117.1| (PREDICTED: exocyst complex component SEC5A isoform X2 [Cucumis sativus]) HSP 1 Score: 455.7 bits (1171), Expect = 4.9e-125 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Csa7G305880 vs. NCBI nr
Match: gi|700189247|gb|KGN44480.1| (hypothetical protein Csa_7G305880 [Cucumis sativus]) HSP 1 Score: 455.7 bits (1171), Expect = 4.9e-125 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Csa7G305880 vs. NCBI nr
Match: gi|659123993|ref|XP_008461939.1| (PREDICTED: exocyst complex component SEC5A-like isoform X3 [Cucumis melo]) HSP 1 Score: 451.4 bits (1160), Expect = 9.3e-124 Identity = 228/231 (98.70%), Postives = 230/231 (99.57%), Query Frame = 1
BLAST of Csa7G305880 vs. NCBI nr
Match: gi|659123991|ref|XP_008461938.1| (PREDICTED: exocyst complex component SEC5A-like isoform X2 [Cucumis melo]) HSP 1 Score: 451.4 bits (1160), Expect = 9.3e-124 Identity = 228/231 (98.70%), Postives = 230/231 (99.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |