CSPI07G12740 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTATTGTCAATAATATAGATATATATATTTTCAATCATTATTTTATTCATTCACTAATTGTTGTTCTCCTTACATCAGGCAAACTTGATGAGAACAGCTGCAACGAACTATTTGTTGGATTCTGGAGTCCACTGGGGAGCTGCTCCTGCAGTTAAAGTAAGTATGCTCCACTCGAGTGTTCGCATGAGTGATCCTATTGATAGCACCACCTCTTATTTTCGTTATTTAATAATCAGCACCTAAAACGAGTGCACTTTGTTCTTTTCTTTTCTTTGCTCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTTTTTTTTTTTTTTTTTTTTTGCAGGGTGTGCGTGATGCAGCTGTAGAGCTACTCCACACTCTTGTGTCTGTCCATGCTGAGGTAATCTTATCATCAATTTAGGATAATACCAAAGCTATGTGCAAGAAGCGAACAATTGCATTCTCATTGTTCAGATTTTCTTCCGTATGTTATAACTATTTTAAGTATGTGCTCTTTCTAATTCTTTTATGCTATCCTGATGGTGTTATTTCCCTTGTCAAAAGGCTCCCACACTTTTCTTGTTCTCATTCCATTTAGGTCTTTCCTTCGTTCTAATTAGTAGTTCTGGCTTGTTGACTCCTATAGTCTCAATTTTAATACATTGTTTCAGGTTTTTGCTGGTTGTAAGCCCCTTTTGGACAAGACACTAGGCATTCTTGTTGAAGGTTTAATTGATACTTTTCTCAGTATCTTTGATGAAAATGGAACAAACGAGCTACGGTCACTGGATACAAATGGTTTCTGTCAACTCATGCTTGAGGTAAAAGTAATGTTTAACACTAGGGGAGGGAAATCTGCGTTAGCGTACAAATCTGGTCAAATGTAGGATGTTTTTCATGTATTTATATTTCAGTTACGGTAGACGGTAGTGGAAAGAAAAAACGAACTGTTGGTCTGTATCAACCGCAACCAAATAAATAAATTGTCCATCCTCCAATTCCAACAGGAAAAATATGGTAAAATAACAAGTAACTGAAGGAAAAATGCACTGTACCTTACGTCCCTTTTTCGTTCAATAGGGCATTTATGATAGTTAATGTGCATTGGAGCAGTTTCATTTAGAAGGTTAACCTGTAATGGTATTTGATGCTTTGTGTTCCTTTCGCAGCTTGAGTACTTTGAGACTATATTAAATCCTTATTTCACATCCGACGCTAGAGAGTCTTTGAAGTCTTTGCAAGGAGTGCTTTTGGAGAAAGCTACTGAAAGTGTGGCAGAAGCAGCTGATAATCCAGGCCATAATCGTCGGCCAACTCGTGGGAGTGAGGAAGCTATAGATGAACGACAACAAGGAGCAACTGCCCCAGATGAACTCATTGTAAGGATCATCGTTTTACATTACATTCTTGTACCATGTTAAACTTAAAAAAAAAAAAAAATCTCGATACCTCTTTATCATTTTAGATTTGGGAGAATTTTTTCATTTTAGTCTCTTTTCAACTTGTAGCACTTCCCTGGGTGCATGTTATATTTGGTCAATGGTAACTTATATGATATGATATTTGGCGATATGATATACGGTATCAAAGCCAATACTCTAGAAACAAACATTTGGTCCAAAAACAAAATTGGGATTAGACACGAGTTGTGAACCCAAAGAGGTAAGCATCTTCAGTGGACATGTTGAGGATCTCACATTGGAAAAATCAAGGGACCTCACAATCTTGATAAGATAGATTAAAGATAGATGAACTGCTTCTCTCATTGTCAATTGATTGTGAGATGAAATTATCTAATGTTAAAAGATTCAAAGGAATTAGAAGCTTATCGTTTGCTCATTTTAAAATTTACCCATGTACTACCATGAGGTTAACCTAGTGGAAAATAGGGGGATGACCTTAATGGTAATGAGTTCAATCAATAGTGGCCACCTATGTAGGATTTAATATCCTACCAGTTTTCTTGGCACTTGAATGTTCTAGGGTCAGACAATTTGTCCTTTAAAAGAAACAGAATACTGGGAGCTTAAAAAAAAAAATTAGGTGTAAAAGACTAGATTGAAAGAACAAAAAAAGAAGGCTTGGTCATTTCTCTAATTTATAATGAAATGGTTTGAAAAGTAGGAGTGGGAGGTACATCAACATCTAGAATTAATATCATTTTACCAATTGCGAGATGGTAGTTGGTTCATGTCAACCATGTCTTTTCTTTTACAACAGATCTGTGCATTTGGCTATAGTCGAATATCTTTTCCATGTTACAGGCACTGGCGCAGCAGTACAGCACAGAATTGCTTCAACAAGAGCTTGAGAGAACACGAATAAACACTGCTTGCTTCGCAGAGTCAATTCCATTGGATTCAGTTCCTGAACCTGCCAAGGCAGCTTACACTTCATTTAATGCCACTTATAGAGGAAGCACAACTCCCACTGGGTCTCCAAGTTTCTCATCCCGTAGCAGGCGTCGCTTGTAGCGTTATTCTTGTTTGTTTGATGGATTTTCCATGTCAATGCACAACTACTTTTTGGTTTCCTTCATTCTTGTAAGTAATTAAATCTTCATTGGTAATCCTAGTATAATTTTTTCCATGGTCAGTCTTTGCTGTATGATTTGTTTATTATTTATTTTCAGTGATGTGGCAGTGTTCATATTTTTGTCCTGAGTTTTATGCAACTTTTTTCAACAAATATTTGTGTTAACAATATGTTTGATTTCCTCGGTTATATGCAGTTATTGCTGCCTACTTTCCATCTGAGAAATATCCAATCTTAGACTGCCTTAAATTTTGAAAATTTGCTTGCTTGTCATCGATAATTTTTCAAAAATGATTCATGGTTTAGTTTTCTTTCGTTTAATCTATGGTGTGCTGAAACACTGAATGGGTAAACCATCCTGAACGCGTTGAGGGTTCCGATGTGAGCCAAAGTTTGGTGTCTTTATAGTT ATGAGAACAGCTGCAACGAACTATTTGTTGGATTCTGGAGTCCACTGGGGAGCTGCTCCTGCAGTTAAAGGTGTGCGTGATGCAGCTGTAGAGCTACTCCACACTCTTGTGTCTGTCCATGCTGAGGTTTTTGCTGGTTGTAAGCCCCTTTTGGACAAGACACTAGGCATTCTTGTTGAAGGTTTAATTGATACTTTTCTCAGTATCTTTGATGAAAATGGAACAAACGAGCTACGGTCACTGGATACAAATGGTTTCTGTCAACTCATGCTTGAGCTTGAGTACTTTGAGACTATATTAAATCCTTATTTCACATCCGACGCTAGAGAGTCTTTGAAGTCTTTGCAAGGAGTGCTTTTGGAGAAAGCTACTGAAAGTGTGGCAGAAGCAGCTGATAATCCAGGCCATAATCGTCGGCCAACTCGTGGGAGTGAGGAAGCTATAGATGAACGACAACAAGGAGCAACTGCCCCAGATGAACTCATTGCACTGGCGCAGCAGTACAGCACAGAATTGCTTCAACAAGAGCTTGAGAGAACACGAATAAACACTGCTTGCTTCGCAGAGTCAATTCCATTGGATTCAGTTCCTGAACCTGCCAAGGCAGCTTACACTTCATTTAATGCCACTTATAGAGGAAGCACAACTCCCACTGGGTCTCCAAGTTTCTCATCCCGTAGCAGGCGTCGCTTGTAG ATGAGAACAGCTGCAACGAACTATTTGTTGGATTCTGGAGTCCACTGGGGAGCTGCTCCTGCAGTTAAAGGTGTGCGTGATGCAGCTGTAGAGCTACTCCACACTCTTGTGTCTGTCCATGCTGAGGTTTTTGCTGGTTGTAAGCCCCTTTTGGACAAGACACTAGGCATTCTTGTTGAAGGTTTAATTGATACTTTTCTCAGTATCTTTGATGAAAATGGAACAAACGAGCTACGGTCACTGGATACAAATGGTTTCTGTCAACTCATGCTTGAGCTTGAGTACTTTGAGACTATATTAAATCCTTATTTCACATCCGACGCTAGAGAGTCTTTGAAGTCTTTGCAAGGAGTGCTTTTGGAGAAAGCTACTGAAAGTGTGGCAGAAGCAGCTGATAATCCAGGCCATAATCGTCGGCCAACTCGTGGGAGTGAGGAAGCTATAGATGAACGACAACAAGGAGCAACTGCCCCAGATGAACTCATTGCACTGGCGCAGCAGTACAGCACAGAATTGCTTCAACAAGAGCTTGAGAGAACACGAATAAACACTGCTTGCTTCGCAGAGTCAATTCCATTGGATTCAGTTCCTGAACCTGCCAAGGCAGCTTACACTTCATTTAATGCCACTTATAGAGGAAGCACAACTCCCACTGGGTCTCCAAGTTTCTCATCCCGTAGCAGGCGTCGCTTGTAG
BLAST of CSPI07G12740 vs. Swiss-Prot
Match: SEC5A_ARATH (Exocyst complex component SEC5A OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.7e-80 Identity = 157/237 (66.24%), Postives = 191/237 (80.59%), Query Frame = 1
BLAST of CSPI07G12740 vs. Swiss-Prot
Match: SEC5B_ARATH (Exocyst complex component SEC5B OS=Arabidopsis thaliana GN=SEC5B PE=1 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.5e-78 Identity = 158/237 (66.67%), Postives = 189/237 (79.75%), Query Frame = 1
BLAST of CSPI07G12740 vs. TrEMBL
Match: A0A0A0K468_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G305880 PE=4 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 4.2e-123 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of CSPI07G12740 vs. TrEMBL
Match: A0A061FI40_THECC (Exocyst complex component sec5 isoform 1 OS=Theobroma cacao GN=TCM_035548 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 9.4e-91 Identity = 181/238 (76.05%), Postives = 205/238 (86.13%), Query Frame = 1
BLAST of CSPI07G12740 vs. TrEMBL
Match: V7BCS7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G088900g PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.6e-90 Identity = 176/231 (76.19%), Postives = 202/231 (87.45%), Query Frame = 1
BLAST of CSPI07G12740 vs. TrEMBL
Match: V7BGR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G088900g PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.6e-90 Identity = 176/231 (76.19%), Postives = 202/231 (87.45%), Query Frame = 1
BLAST of CSPI07G12740 vs. TrEMBL
Match: V4V6N3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000108mg PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.6e-90 Identity = 185/247 (74.90%), Postives = 204/247 (82.59%), Query Frame = 1
BLAST of CSPI07G12740 vs. TAIR10
Match: AT1G76850.1 (AT1G76850.1 exocyst complex component sec5) HSP 1 Score: 299.3 bits (765), Expect = 2.1e-81 Identity = 157/237 (66.24%), Postives = 191/237 (80.59%), Query Frame = 1
BLAST of CSPI07G12740 vs. TAIR10
Match: AT1G21170.1 (AT1G21170.1 Exocyst complex component SEC5) HSP 1 Score: 293.9 bits (751), Expect = 8.7e-80 Identity = 158/237 (66.67%), Postives = 189/237 (79.75%), Query Frame = 1
BLAST of CSPI07G12740 vs. NCBI nr
Match: gi|449443834|ref|XP_004139681.1| (PREDICTED: exocyst complex component SEC5A isoform X1 [Cucumis sativus]) HSP 1 Score: 448.7 bits (1153), Expect = 6.0e-123 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of CSPI07G12740 vs. NCBI nr
Match: gi|778726545|ref|XP_011659117.1| (PREDICTED: exocyst complex component SEC5A isoform X2 [Cucumis sativus]) HSP 1 Score: 448.7 bits (1153), Expect = 6.0e-123 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of CSPI07G12740 vs. NCBI nr
Match: gi|700189247|gb|KGN44480.1| (hypothetical protein Csa_7G305880 [Cucumis sativus]) HSP 1 Score: 448.7 bits (1153), Expect = 6.0e-123 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of CSPI07G12740 vs. NCBI nr
Match: gi|659123991|ref|XP_008461938.1| (PREDICTED: exocyst complex component SEC5A-like isoform X2 [Cucumis melo]) HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121 Identity = 228/231 (98.70%), Postives = 230/231 (99.57%), Query Frame = 1
BLAST of CSPI07G12740 vs. NCBI nr
Match: gi|659123993|ref|XP_008461939.1| (PREDICTED: exocyst complex component SEC5A-like isoform X3 [Cucumis melo]) HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121 Identity = 228/231 (98.70%), Postives = 230/231 (99.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |