Csa7G284410 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G284410
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 10010216 .. 10010927 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTGTGATAAAAGAGTTGATGATAGCAATTTATGCATGCTAAACTGGATTGTTGACACACATCAAGAGTGGAAGGAATTGGCTGAAAGGGTCTTTGACACTAATCAGGTAATAAACGAAGTAAATTGAAATATATTCAAATTAAATCTGTATATATACTATATACGAAAATATACTTATGTACACTACTTTTGAAATTTTAGTTTGTGTTCAAGGGGTTGTTTCCTGATGAAGATGTCATGGAAGGAAATATGTTCCATGGGACTGAAACCAAAAATTTTGAAAAAGGAGAATACTCTAAAGAATCTGCGCGTATTAACACTCAGATTCATGAGTATTTCCTAACATTCCAGGAAATTATGTTGGCAAACAATGAAGAATTAAATAAGATGTTGGACAAACTAGTTGGGAGGTTGAAGAGATCAAAAATAAATTGACTAATATAAGTAGTTCAATGACTGAAGAAGAAAATTGTGAAAATAGGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACGGATTGGTGGACGATGGAGAAGATTGTAATACAGAAAATATAAATATGGATGAAGAAGGGGACAAAACTACAATAGTAAATAGTGAAAATGAAGCTGCAAGGGTATGATGTTATGATTAGTATAGGTCTTGTGTATGTATTTAGTACTGTGTATGTATTCTTGATTGACAGGATGGACAGAACTAG

mRNA sequence

ATGTTCTGTGATAAAAGAGTTGATGATAGCAATTTATGCATGCTAAACTGGATTGTTGACACACATCAAGAGTGGAAGGAATTGGCTGAAAGGGTCTTTGACACTAATCAGTTTGTGTTCAAGGGGTTGTTTCCTGATGAAGATGTCATGGAAGGAAATATGTTCCATGGGACTGAAACCAAAAATTTTGAAAAAGGAGAATACTCTAAAGAATCTGCGCGTATTAACACTCAGATTCATGAGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACGGATTGGTGGACGATGGAGAAGATTGTAATACAGAAAATATAAATATGGATGAAGAAGGGGACAAAACTACAATAGTAAATAGTGAAAATGAAGCTGCAAGGGATGGACAGAACTAG

Coding sequence (CDS)

ATGTTCTGTGATAAAAGAGTTGATGATAGCAATTTATGCATGCTAAACTGGATTGTTGACACACATCAAGAGTGGAAGGAATTGGCTGAAAGGGTCTTTGACACTAATCAGTTTGTGTTCAAGGGGTTGTTTCCTGATGAAGATGTCATGGAAGGAAATATGTTCCATGGGACTGAAACCAAAAATTTTGAAAAAGGAGAATACTCTAAAGAATCTGCGCGTATTAACACTCAGATTCATGAGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACGGATTGGTGGACGATGGAGAAGATTGTAATACAGAAAATATAAATATGGATGAAGAAGGGGACAAAACTACAATAGTAAATAGTGAAAATGAAGCTGCAAGGGATGGACAGAACTAG

Protein sequence

MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTETKNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAARDGQN*

Homology

[Close]

BLAST of Csa7G284410 vs. TrEMBL
Match: A0A0A0K3Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G284410 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.0e-73
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1


Query: 1   MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET 60
           MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET
Sbjct: 1   MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET 60

Query: 61  KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 120
           KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV
Sbjct: 61  KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 120

Query: 121 NSENEAARDGQN 133
           NSENEAARDGQN
Sbjct: 121 NSENEAARDGQN 132

[Close]

BLAST of Csa7G284410 vs. TrEMBL
Match: A0A0A0LXM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G639010 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-14
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 1


Query: 82  DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAARD 130
           DEDRDGGNGERDD LV++GED NTENI MDEEGD+TTIVNSENEAAR+
Sbjct: 78  DEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAARN 125

[Close]

BLAST of Csa7G284410 vs. TrEMBL
Match: A0A0A0LXM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G639010 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-05
Identity = 46/122 (37.70%), Postives = 56/122 (45.90%), Query Frame = 1


Query: 58  TETKNFEKGEYSKESARINTQIHE----------------DEDRDGGNGERDD------- 117
           T T+NFEKGE SKES  INTQI E                ++  D   GE ++       
Sbjct: 4   TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63

Query: 118 --GLVDDGEDC-------------------------NTENINMDEEGDKTTIVNSENEAA 130
              L+ + E+                          NTENI MDEEGD+TTIVNSENEAA
Sbjct: 64  RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAA 123

HSP 2 Score: 87.0 bits (214), Expect = 1.8e-14
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1


Query: 81  EDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAA 128
           +DEDRDG NGERDD L+DDGED NTENINMDE+GDKTTIVNSENEAA
Sbjct: 10  KDEDRDGENGERDDRLLDDGEDGNTENINMDEKGDKTTIVNSENEAA 56

[Close]

BLAST of Csa7G284410 vs. TrEMBL
Match: A0A0A0L8U3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603550 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-12
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1


Query: 82  DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAAR 129
           DEDRDGGNG+R+D L DDGED NTEN+N+DE+ ++TTI+NSENEAAR
Sbjct: 83  DEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAAR 129

[Close]

BLAST of Csa7G284410 vs. TrEMBL
Match: A0A0A0L8U3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603550 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.7e-08
Identity = 49/129 (37.98%), Postives = 59/129 (45.74%), Query Frame = 1


Query: 50  MEGNMFHGTETKNFEKGEYSKESARINTQIHE------------------DEDRDGGNGE 109
           MEG+MFH TE KNFEKGE SKES  INTQI E                    D+  G  E
Sbjct: 1   MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 60

Query: 110 --------------RDDGLVDDGED------------------CNTENINMDEEGDKTTI 129
                          ++   D  ED                   NTEN+N+DE+ ++TTI
Sbjct: 61  EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 120

[Close]

BLAST of Csa7G284410 vs. NCBI nr
Match: gi|700189182|gb|KGN44415.1| (hypothetical protein Csa_7G284410 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 4.3e-73
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1


Query: 1   MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET 60
           MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET
Sbjct: 1   MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET 60

Query: 61  KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 120
           KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV
Sbjct: 61  KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 120

Query: 121 NSENEAARDGQN 133
           NSENEAARDGQN
Sbjct: 121 NSENEAARDGQN 132

[Close]

BLAST of Csa7G284410 vs. NCBI nr
Match: gi|700211509|gb|KGN66605.1| (hypothetical protein Csa_1G639010 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-14
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 1


Query: 82  DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAARD 130
           DEDRDGGNGERDD LV++GED NTENI MDEEGD+TTIVNSENEAAR+
Sbjct: 78  DEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAARN 125

[Close]

BLAST of Csa7G284410 vs. NCBI nr
Match: gi|700211509|gb|KGN66605.1| (hypothetical protein Csa_1G639010 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-05
Identity = 46/122 (37.70%), Postives = 56/122 (45.90%), Query Frame = 1


Query: 58  TETKNFEKGEYSKESARINTQIHE----------------DEDRDGGNGERDD------- 117
           T T+NFEKGE SKES  INTQI E                ++  D   GE ++       
Sbjct: 4   TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63

Query: 118 --GLVDDGEDC-------------------------NTENINMDEEGDKTTIVNSENEAA 130
              L+ + E+                          NTENI MDEEGD+TTIVNSENEAA
Sbjct: 64  RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAA 123

HSP 2 Score: 87.0 bits (214), Expect = 2.6e-14
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1


Query: 81  EDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAA 128
           +DEDRDG NGERDD L+DDGED NTENINMDE+GDKTTIVNSENEAA
Sbjct: 10  KDEDRDGENGERDDRLLDDGEDGNTENINMDEKGDKTTIVNSENEAA 56

[Close]

BLAST of Csa7G284410 vs. NCBI nr
Match: gi|659129587|ref|XP_008464748.1| (PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo])

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-12
Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 1


Query: 1   MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFH---- 60
           +FC ++ DD+ +CMLNW+VD+H EWK+LA++VFD +QF F+ +F +ED +E   FH    
Sbjct: 52  IFCAQKADDNKICMLNWVVDSHPEWKDLAKKVFDNDQFKFEAMF-EEDFVERRTFHEYVM 111

Query: 61  GTETK-NFEKGEYSKESARINTQIHE----DEDRDGGNGE----RDDGLVDDGEDC---- 120
             ET   FE+GE S++    N +I +     ++    N E    + D L+ + E      
Sbjct: 112 REETNVTFERGESSRQGEASNKKIPDYFLKFQELILTNNECLNNKLDLLIKEVESLKDML 171

Query: 121 ---------NTENINMDEEGDK----TTIVNSENEAARDGQN 133
                    N +NI  D+  D+    T   N ENE  RD  N
Sbjct: 172 KEKVNQIVENNDNIPRDDNNDEGEWDTHNENIENEVQRDVTN 212

[Close]

BLAST of Csa7G284410 vs. NCBI nr
Match: gi|700203135|gb|KGN58268.1| (hypothetical protein Csa_3G603550 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 5.5e-12
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1


Query: 82  DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAAR 129
           DEDRDGGNG+R+D L DDGED NTEN+N+DE+ ++TTI+NSENEAAR
Sbjct: 83  DEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAAR 129

The following BLAST results are available for this feature:

BLAST of Csa7G284410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3Z3_CUCSA	3.0e-73	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G284410 PE=4 SV=1	[more]
A0A0A0LXM6_CUCSA	1.1e-14	85.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G639010 PE=4 SV=1	[more]
A0A0A0LXM6_CUCSA	1.6e-05	37.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G639010 PE=4 SV=1	[more]
A0A0A0L8U3_CUCSA	3.8e-12	74.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603550 PE=4 SV=1	[more]
A0A0A0L8U3_CUCSA	9.7e-08	37.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603550 PE=4 SV=1	[more]

BLAST of Csa7G284410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189182\|gb\|KGN44415.1\|	4.3e-73	100.00	hypothetical protein Csa_7G284410 [Cucumis sativus]	[more]
gi\|700211509\|gb\|KGN66605.1\|	1.5e-14	85.42	hypothetical protein Csa_1G639010 [Cucumis sativus]	[more]
gi\|700211509\|gb\|KGN66605.1\|	2.2e-05	37.70	hypothetical protein Csa_1G639010 [Cucumis sativus]	[more]
gi\|659129587\|ref\|XP_008464748.1\|	2.5e-12	34.57	PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo]	[more]
gi\|700203135\|gb\|KGN58268.1\|	5.5e-12	74.47	hypothetical protein Csa_3G603550 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G284410.1	Csa7G284410.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G284410	CSPI07G12120	Wild cucumber (PI 183967)	cpicuB354

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G284410	Cucurbita maxima (Rimu)	cmacuB039
Csa7G284410	Cucurbita maxima (Rimu)	cmacuB500
Csa7G284410	Cucurbita moschata (Rifu)	cmocuB029
Csa7G284410	Cucurbita moschata (Rifu)	cmocuB478
Csa7G284410	Melon (DHL92) v3.5.1	cumeB528
Csa7G284410	Melon (DHL92) v3.5.1	cumeB542
Csa7G284410	Watermelon (Charleston Gray)	cuwcgB525
Csa7G284410	Watermelon (97103) v1	cuwmB567
Csa7G284410	Cucurbita pepo (Zucchini)	cpecuB592
Csa7G284410	Cucurbita pepo (Zucchini)	cpecuB801
Csa7G284410	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G284410	Cucumber (Gy14) v2	cgybcuB323
Csa7G284410	Melon (DHL92) v3.6.1	cumedB503
Csa7G284410	Melon (DHL92) v3.6.1	cumedB521
Csa7G284410	Watermelon (97103) v2	cuwmbB571
Csa7G284410	Wax gourd	cuwgoB707
Csa7G284410	Cucumber (Gy14) v1	cgycuB348