CSPI07G12120 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G12120
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr7 : 10382701 .. 10383842 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCATACAGTGGAGTCTCCTTTGGAATTCCAAGTCTCCGCTTCAACTTTTGAATTTGTGGGGTATTGTTGTTCAAATCCGCGTGGAAATTGGAGTGATCTTTGCTCCAATATGTCACCAAAGGCGTCCATAAGTGGATCCTCTTCTCCAACAAACTGTGTACAAAAACGGTTATGTGAGTTGAGAAAATTGCATAGACCTGCCCTTTCTAGAGACTCAAACTAAAATTAAGCCCAAGTTTGAAAATCAACGAGTTTTGTTCCTTTTTTTATGTCAGCATTGCATGAATTTACCATCATCGTATCTTAAATGGTCTACTTCCTTCTTCGTTCCTTTATTCGTTTTTCTGCAATTTTCTATTGTCCTTTTTCTCTTTTCATTTTTAGTACGAGCATATGAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGATAAAAGAGTTGATGATAGCAATTTATGCATGCTAAACTGGATTGTTGACACACATCAAGAGTGGAAGGAATTGGCTGAAAGGGTCTTTGACACTAATTAGGTAATAAACGAAGTAAATTGAAATATATTCAAATTAAATCTGTATATATACTATATACGAAAATATACTTATGTACACTACTTTTGAAATTTTAGTTTGTGTTCAAGGGGTTGTTTCCTGATGAAGATGTCATGGAAAAAAATATGTTCGATGGGACTGAAACCAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGCGCGTATTAACACTCAGATTCATGAGTATTTCCTAACATTCCAGGAAATTATGTTGGCAAACAATGAAGAATTAATAAAGAAGTTGGACAAACTAGTTGGGAGGTTGAAGAGATCAAAAATAAATTGACTAATATAAGTAGTTCAATGACTGAAGAAGAAAATTGTGAAAATAGAGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACGGATTGGTGGACGATGGAGAAGATTGTAATACAGAAAATATAAATATGGATGAAGAAGGGGACAAAACTACAATAGTAAATAGTGAAAATGAAGCTGCAAGGGTATGATGTTATGATTAGTATAGGTCTTGTGTATGTATTTAGTATTGTGTATGTATTCTTGATTGACAGGATAGACAGAACTAG

mRNA sequence

ATGCGTCATACAGTGGAGTCTCCTTTGGAATTCCAAGTCTCCGCTTCAACTTTTGAATTTGTGGGGTATTGTTGTTCAAATCCGCGTGGAAATTGGAGTGATCTTTGCTCCAATATGTCACCAAAGGCGTCCATAAGTGGATCCTCTTCTCCAACAAACTGTGTACAAAAACGGTTATTACGAGCATATGAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGATAAAAGAGTTGATGATAGCAATTTATGCATGCTAAACTGGATTGTTGACACACATCAAGAGTGGAAGGAATTGGCTGAAAGGTTTGTGTTCAAGGGGTTGTTTCCTGATGAAGATGTCATGGAAAAAAATATGTTCGATGGGACTGAAACCAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGCGCGTATTAACACTCAGATTCATGAAGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACGGATTGGTGGACGATGGAGAAGATTGTAATACAGAAAATATAAATATGGATGAAGAAGGGGACAAAACTACAATAGTAAATAGTGAAAATGAAGCTGCAAGGGATAGACAGAACTAG

Coding sequence (CDS)

ATGCGTCATACAGTGGAGTCTCCTTTGGAATTCCAAGTCTCCGCTTCAACTTTTGAATTTGTGGGGTATTGTTGTTCAAATCCGCGTGGAAATTGGAGTGATCTTTGCTCCAATATGTCACCAAAGGCGTCCATAAGTGGATCCTCTTCTCCAACAAACTGTGTACAAAAACGGTTATTACGAGCATATGAATGTATACCACTATTGAGTGGACCTTCCATGTTCTGTGATAAAAGAGTTGATGATAGCAATTTATGCATGCTAAACTGGATTGTTGACACACATCAAGAGTGGAAGGAATTGGCTGAAAGGTTTGTGTTCAAGGGGTTGTTTCCTGATGAAGATGTCATGGAAAAAAATATGTTCGATGGGACTGAAACCAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGCGCGTATTAACACTCAGATTCATGAAGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACGGATTGGTGGACGATGGAGAAGATTGTAATACAGAAAATATAAATATGGATGAAGAAGGGGACAAAACTACAATAGTAAATAGTGAAAATGAAGCTGCAAGGGATAGACAGAACTAG

Homology

[Close]

BLAST of CSPI07G12120 vs. TrEMBL
Match: A0A0A0K3Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G284410 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 121/132 (91.67%), Postives = 122/132 (92.42%), Query Frame = 1


Query: 74  MFCDKRVDDSNLCMLNWIVDTHQEWKELAE------RFVFKGLFPDEDVMEKNMFDGTET 133
           MFCDKRVDDSNLCMLNWIVDTHQEWKELAE      +FVFKGLFPDEDVME NMF GTET
Sbjct: 1   MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET 60

Query: 134 KNFEKGECSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 193
           KNFEKGE SKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV
Sbjct: 61  KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 120

Query: 194 NSENEAARDRQN 200
           NSENEAARD QN
Sbjct: 121 NSENEAARDGQN 132

[Close]

BLAST of CSPI07G12120 vs. TrEMBL
Match: A0A0A0LXM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G639010 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.7e-11
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 1


Query: 149 DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAARD 197
           DEDRDGGNGERDD LV++GED NTENI MDEEGD+TTIVNSENEAAR+
Sbjct: 78  DEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAARN 125

[Close]

BLAST of CSPI07G12120 vs. TrEMBL
Match: A0A0A0KHB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G191010 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.4e-11
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1


Query: 148 EDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAA 195
           +DEDRDG NGERDD L+DDGED NTENINMDE+GDKTTIVNSENEAA
Sbjct: 10  KDEDRDGENGERDDRLLDDGEDGNTENINMDEKGDKTTIVNSENEAA 56

[Close]

BLAST of CSPI07G12120 vs. TrEMBL
Match: A0A0A0L8U3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603550 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1


Query: 149 DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAAR 196
           DEDRDGGNG+R+D L DDGED NTEN+N+DE+ ++TTI+NSENEAAR
Sbjct: 83  DEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAAR 129

[Close]

BLAST of CSPI07G12120 vs. NCBI nr
Match: gi|700189182|gb|KGN44415.1| (hypothetical protein Csa_7G284410 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 5.3e-59
Identity = 121/132 (91.67%), Postives = 122/132 (92.42%), Query Frame = 1


Query: 74  MFCDKRVDDSNLCMLNWIVDTHQEWKELAE------RFVFKGLFPDEDVMEKNMFDGTET 133
           MFCDKRVDDSNLCMLNWIVDTHQEWKELAE      +FVFKGLFPDEDVME NMF GTET
Sbjct: 1   MFCDKRVDDSNLCMLNWIVDTHQEWKELAERVFDTNQFVFKGLFPDEDVMEGNMFHGTET 60

Query: 134 KNFEKGECSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 193
           KNFEKGE SKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV
Sbjct: 61  KNFEKGEYSKESARINTQIHEDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIV 120

Query: 194 NSENEAARDRQN 200
           NSENEAARD QN
Sbjct: 121 NSENEAARDGQN 132

[Close]

BLAST of CSPI07G12120 vs. NCBI nr
Match: gi|700211509|gb|KGN66605.1| (hypothetical protein Csa_1G639010 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 5.3e-11
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 1


Query: 149 DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAARD 197
           DEDRDGGNGERDD LV++GED NTENI MDEEGD+TTIVNSENEAAR+
Sbjct: 78  DEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAARN 125

[Close]

BLAST of CSPI07G12120 vs. NCBI nr
Match: gi|700191957|gb|KGN47161.1| (hypothetical protein Csa_6G191010 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 9.1e-11
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1


Query: 148 EDEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAA 195
           +DEDRDG NGERDD L+DDGED NTENINMDE+GDKTTIVNSENEAA
Sbjct: 10  KDEDRDGENGERDDRLLDDGEDGNTENINMDEKGDKTTIVNSENEAA 56

[Close]

BLAST of CSPI07G12120 vs. NCBI nr
Match: gi|659129587|ref|XP_008464748.1| (PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 60/177 (33.90%), Postives = 90/177 (50.85%), Query Frame = 1


Query: 59  LLRAYECIPLLSGPSMFCDKRVDDSNLCMLNWIVDTHQEWKELA------ERFVFKGLFP 118
           L+  YECI LL+G S+FC ++ DD+ +CMLNW+VD+H EWK+LA      ++F F+ +F 
Sbjct: 37  LVWVYECISLLTGSSIFCAQKADDNKICMLNWVVDSHPEWKDLAKKVFDNDQFKFEAMF- 96

Query: 119 DEDVMEKNMFD----GTETK-NFEKGECSKESARINTQIHE----DEDRDGGNGE----R 178
           +ED +E+  F       ET   FE+GE S++    N +I +     ++    N E    +
Sbjct: 97  EEDFVERRTFHEYVMREETNVTFERGESSRQGEASNKKIPDYFLKFQELILTNNECLNNK 156

Query: 179 DDGLVDDGEDC-------------NTENINMDEEGDK----TTIVNSENEAARDRQN 200
            D L+ + E               N +NI  D+  D+    T   N ENE  RD  N
Sbjct: 157 LDLLIKEVESLKDMLKEKVNQIVENNDNIPRDDNNDEGEWDTHNENIENEVQRDVTN 212

[Close]

BLAST of CSPI07G12120 vs. NCBI nr
Match: gi|700203135|gb|KGN58268.1| (hypothetical protein Csa_3G603550 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1


Query: 149 DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAAR 196
           DEDRDGGNG+R+D L DDGED NTEN+N+DE+ ++TTI+NSENEAAR
Sbjct: 83  DEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAAR 129

The following BLAST results are available for this feature:

BLAST of CSPI07G12120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G12120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3Z3_CUCSA	3.7e-59	91.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G284410 PE=4 SV=1	[more]
A0A0A0LXM6_CUCSA	3.7e-11	85.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G639010 PE=4 SV=1	[more]
A0A0A0KHB6_CUCSA	6.4e-11	87.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G191010 PE=4 SV=1	[more]
A0A0A0L8U3_CUCSA	1.0e-08	74.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603550 PE=4 SV=1	[more]

BLAST of CSPI07G12120 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G12120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189182\|gb\|KGN44415.1\|	5.3e-59	91.67	hypothetical protein Csa_7G284410 [Cucumis sativus]	[more]
gi\|700211509\|gb\|KGN66605.1\|	5.3e-11	85.42	hypothetical protein Csa_1G639010 [Cucumis sativus]	[more]
gi\|700191957\|gb\|KGN47161.1\|	9.1e-11	87.23	hypothetical protein Csa_6G191010 [Cucumis sativus]	[more]
gi\|659129587\|ref\|XP_008464748.1\|	1.1e-08	33.90	PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo]	[more]
gi\|700203135\|gb\|KGN58268.1\|	1.5e-08	74.47	hypothetical protein Csa_3G603550 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G12120.1	CSPI07G12120.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G12120	Csa7G284410	Cucumber (Chinese Long) v2	cpicuB354

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G12120	Melon (DHL92) v3.5.1	cpimeB528
CSPI07G12120	Melon (DHL92) v3.5.1	cpimeB548
CSPI07G12120	Watermelon (Charleston Gray)	cpiwcgB554
CSPI07G12120	Watermelon (97103) v1	cpiwmB586
CSPI07G12120	Watermelon (97103) v1	cpiwmB582
CSPI07G12120	Cucurbita pepo (Zucchini)	cpecpiB593
CSPI07G12120	Cucurbita pepo (Zucchini)	cpecpiB801
CSPI07G12120	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G12120	Bottle gourd (USVL1VR-Ls)	cpilsiB528
CSPI07G12120	Melon (DHL92) v3.6.1	cpimedB514
CSPI07G12120	Melon (DHL92) v3.6.1	cpimedB534
CSPI07G12120	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G12120	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G12120	Watermelon (97103) v2	cpiwmbB597
CSPI07G12120	Wax gourd	cpiwgoB718
CSPI07G12120	Cucumber (Gy14) v1	cgycpiB364
CSPI07G12120	Cucurbita maxima (Rimu)	cmacpiB039
CSPI07G12120	Cucurbita maxima (Rimu)	cmacpiB505
CSPI07G12120	Cucurbita moschata (Rifu)	cmocpiB029
CSPI07G12120	Cucurbita moschata (Rifu)	cmocpiB484