Csa7G281390 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G281390
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Description40S ribosomal protein S4, putative; contains IPR000876 (Ribosomal protein S4e)
LocationChr7 : 9945874 .. 9948965 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATTAAAATTAAGAAAAAAGTCCCTTAATGGCTCTCTCTACCTCTCTCTCTCTCTGGAGGTTTTTTATGTTTTCGTTGTAACAAACACTCTCTCTTCAGTAAGAAACCCTATCTCTCCCCCACTAGCGCCGGCGCCGACTCCGACTTTTAGCTCTTGCAACAGATATGGTCACTCATCTTCCTTTCATTCATTTTTCCATTCTATTCTTCTTTCTATCCTTCTTCTACAGATTCTGATTACCTGTTCATTTTGTTACATTATCGTTTCTTGTTTTATCTTATGCTCTCTGGATTTCTCCATCTATGCTTGTGTTTTCCCGTCTTGGTATTCCAAATAAATAATTTTTTTTGTTTGAAATTAATGCCTATGGTTATGACAGGCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGTGAGTCAAATTTGTTGTTTTATTTGTTTTTCCTTTTCTTTCTGAGTTTATGAATCATAACGTTTAGTTTTATCTCTCTAATCTGTTTGTAGGCCCCCAAACCTTCATCTGGTCCTCATAAGTCGAGGGAATGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAGTATGCTCTCACGTACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACTGATAAGACTTTTCCTGCTGGTTTTATGGGTATGCTTATCTTAAACTTTGTAACCTAACTAGTGTTTTAGTTTAAATCATCCAATTTATACTTACCCTTTTACATTAGTGCCTCTACAGAAGTTGTTACAGATTGCTTGCTAAATTGGTTTTTTTATTCTCGAAATTGGCTGTTGATTTTATGAACTGAATTGGGGAAATAATGGAGTGTTAACTCATCCATCCATATGGATATTGTCTTCTTTTGGTCTTATTGCTTTCCATGCCCTCATATTAGGCTATACCTAATGGTTGGTGGAGTTTATTTTATAAGTTGTATGTTATTTATTTTTGGTGGCTTGACTGTTAGCTCTCTATCGTCATTTTGGTTTAGCATTTTTTAACAATTCTTCGAAAAGTGTTGTCTGTGAATAGGAATGGGCCAAATAGTTAGGAATGCAACTATAGATATAGGTTTACCTGCCAAATTACCAAGTGGGAACAAAATGGTATTATTGATGATATGTTCAAATGGTTTGATCGATAACTCATAAACGTGTCCTGCTTGGAACTGCTTTGTATCTATGTTGCTTCATGTTCTGTTTTTTGCCTTTGTGTATACATTTTAAGCACATCACTAATTTTTGTCTCTCTCCCTCTTTAGACGTTGTGTCAATTCCCAAGACAAACGAAAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGGTTAGCCACTGTTCTTCTGATATTGACCTTTGACCTGCTGTTTATTACAATCTTGTTGTATAAAGTGTACTAGATTGAAAGAAAATTATATGCAATTAAAAAGGAGGTTTTGGCATCGATGGTTCATAAATCATAGGGGAGAGGTTTAGCATTTGTCTGGTTGGATTAGTGTATTCTATAATCATTCTGCATTTGTTAGTTTGATTTTTTGAAGTTAGGTGCTCCTTTCAGATTTTTATCAATTACGGTAATGGAGGAAAACGAAACACTCTGAAGTAGGGGTGATAGTCGGTTTGGTTTGGTCGGTTTTGAAGCCAACCAATAACCAAACCTAACAAATCGGTTTCACATAAGGGATCCATACCAATGTCCAATAAAAAAACAAAATCAATGGATTGGTTTTATTTGGATCAATTTATTATTGGTTTGATGCTTTGTTTTTGACATTTTCGTTTCTTCTTCCAAAGTTTAATCTTACTTTCCACTTTGGTTTGAATGTCATTTTTGGTAACTTTAAATTGAAATTTGGACTATTTCTTTCTTTATAAATTACAATTTGACATTTTTCTTTTCTTATTTTTGGCAATTTTCTAAATAAAAAAAATGCATGCTGCATAATAATTAGTCTTTTTTTTTTCTAAAGAACAAATAGTCATGCACCATAATAATTATAATACAAAAAGATACCTAATGACAGTGTATGTTTAGGGCTATATATCTACCATATGGTTCAGGTTTTCATTGGTTTTTCCCACAAAAATCCTATCCGAACCAATATGTTTTGTTTTTTTTTCCAATACAAACCAAGAAGTTCAATTGGGTACTAAAAAACTCAACCAAACAAACCATTGTTTCAGTTTAGATTGGTTTGGTTTTTTGACTTGGTTTTTTGTATGATTCCTACTCTGAAGTAACAGGCTGGAGATGCTGGACACTGTTTGTTTTCCATGATATAATTGGACGGTTCGAAGGTTGACTTTCACATTATCTTTTTGCAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTGGGAGTTATAAAGAACAGGGAGAAGCATACGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACCGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACAATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAATTATCCATTATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCACAGTTACTGCTTAAGACTTAGTTTAGTGTAACGTAGTCATGGATGAAAGATTGGATTTTTCTTTTGTTTTTGTATAAGTAGATCTAGAAAAGGCTGATACACTTGGATATTTCTACTTCAACTGTGTGAAGCTACTGCTATGATTTTGTCATTCCAAGACTCTTTTCTTCATGAGGGCTACTTGTTTTTCTGGTAAATGGAAAAATCTTGACTTGTGTTCGATTTGTT

mRNA sequence

ATGGCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGTCCTCATAAGTCGAGGGAATGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAGTATGCTCTCACGTACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACTGATAAGACTTTTCCTGCTGGTTTTATGGACGTTGTGTCAATTCCCAAGACAAACGAAAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTGGGAGTTATAAAGAACAGGGAGAAGCATACGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACCGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACAATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAATTATCCATTATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCACAGTTACTGCTTAA

Coding sequence (CDS)

ATGGCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGTCCTCATAAGTCGAGGGAATGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAGTATGCTCTCACGTACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACTGATAAGACTTTTCCTGCTGGTTTTATGGACGTTGTGTCAATTCCCAAGACAAACGAAAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTGGGAGTTATAAAGAACAGGGAGAAGCATACGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACCGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACAATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAATTATCCATTATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCACAGTTACTGCTTAA

Protein sequence

MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQATVTA*
Homology
[Close]
BLAST of Csa7G281390 vs. Swiss-Prot
Match: RS4_CRIGR (40S ribosomal protein S4 OS=Cricetulus griseus GN=RPS4 PE=2 SV=2)

HSP 1 Score: 389.0 bits (998), Expect = 4.0e-107
Identity = 183/259 (70.66%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           V  I MQR + +DGKVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK
Sbjct: 61  VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVR +  G KGIP+L T+D RTIRYPDPLIK NDTI++DLE+ KI DFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
            MVTGG N GR+GVI NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGI+L+I EE  KRLA++
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259

[Close]
BLAST of Csa7G281390 vs. Swiss-Prot
Match: RS4X_MOUSE (40S ribosomal protein S4, X isoform OS=Mus musculus GN=Rps4x PE=1 SV=2)

HSP 1 Score: 388.7 bits (997), Expect = 5.3e-107
Identity = 183/259 (70.66%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           V  I MQR + +DGKVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK
Sbjct: 61  VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVR +  G KGIP+L T+D RTIRYPDPLIK NDTI++DLE+ KI DFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
            MVTGG N GR+GVI NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGI+L+I EE  KRLA++
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259

[Close]
BLAST of Csa7G281390 vs. Swiss-Prot
Match: RS4X_RAT (40S ribosomal protein S4, X isoform OS=Rattus norvegicus GN=Rps4x PE=2 SV=2)

HSP 1 Score: 388.7 bits (997), Expect = 5.3e-107
Identity = 183/259 (70.66%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           V  I MQR + +DGKVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK
Sbjct: 61  VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVR +  G KGIP+L T+D RTIRYPDPLIK NDTI++DLE+ KI DFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
            MVTGG N GR+GVI NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGI+L+I EE  KRLA++
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259

[Close]
BLAST of Csa7G281390 vs. Swiss-Prot
Match: RS4X_CHLAE (40S ribosomal protein S4, X isoform OS=Chlorocebus aethiops GN=RPS4X PE=2 SV=3)

HSP 1 Score: 388.7 bits (997), Expect = 5.3e-107
Identity = 183/259 (70.66%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           V  I MQR + +DGKVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK
Sbjct: 61  VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVR +  G KGIP+L T+D RTIRYPDPLIK NDTI++DLE+ KI DFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
            MVTGG N GR+GVI NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGI+L+I EE  KRLA++
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259

[Close]
BLAST of Csa7G281390 vs. Swiss-Prot
Match: RS4X_MESAU (40S ribosomal protein S4, X isoform OS=Mesocricetus auratus GN=RPS4X PE=2 SV=2)

HSP 1 Score: 388.7 bits (997), Expect = 5.3e-107
Identity = 183/259 (70.66%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           V  I MQR + +DGKVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK
Sbjct: 61  VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVR +  G KGIP+L T+D RTIRYPDPLIK NDTI++DLE+ KI DFIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
            MVTGG N GR+GVI NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGI+L+I EE  KRLA++
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259

[Close]
BLAST of Csa7G281390 vs. TrEMBL
Match: A0A0A0K3Y8_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G281390 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 2.5e-148
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATVTA 265
           GKGIKLSIIEEARKRLASQATVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of Csa7G281390 vs. TrEMBL
Match: A0A0A0K4K7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 2.4e-146
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATVTA 265
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Csa7G281390 vs. TrEMBL
Match: A0A0A0KQK7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_5G212590 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 3.8e-144
Identity = 255/264 (96.59%), Postives = 261/264 (98.86%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATVTA 265
           GKGIKL+IIEEARKRLASQ+ VTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]
BLAST of Csa7G281390 vs. TrEMBL
Match: A0A067K6J4_JATCU (40S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_16213 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 3.2e-143
Identity = 253/262 (96.56%), Postives = 258/262 (98.47%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATV 263
           GKGIKLSIIEEARKRLA+  TV
Sbjct: 241 GKGIKLSIIEEARKRLATAQTV 262

[Close]
BLAST of Csa7G281390 vs. TrEMBL
Match: A0A067L9J7_JATCU (40S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_17463 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 7.1e-143
Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATVTA 265
           GKGIKLSIIEEARKR A+ A   A
Sbjct: 241 GKGIKLSIIEEARKRQAAAAQTVA 264

[Close]
BLAST of Csa7G281390 vs. TAIR10
Match: AT5G58420.1 (AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 502.7 bits (1293), Expect = 1.4e-142
Identity = 241/259 (93.05%), Postives = 253/259 (97.68%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGIKL+IIEEARKRLASQ
Sbjct: 241 GKGIKLTIIEEARKRLASQ 259

[Close]
BLAST of Csa7G281390 vs. TAIR10
Match: AT5G07090.1 (AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 502.3 bits (1292), Expect = 1.8e-142
Identity = 241/259 (93.05%), Postives = 252/259 (97.30%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGIKL+IIEEARKRLASQ
Sbjct: 241 GKGIKLTIIEEARKRLASQ 259

[Close]
BLAST of Csa7G281390 vs. TAIR10
Match: AT2G17360.1 (AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 500.0 bits (1286), Expect = 9.1e-142
Identity = 239/259 (92.28%), Postives = 252/259 (97.30%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGIKL+IIEEARKRL++Q
Sbjct: 241 GKGIKLTIIEEARKRLSAQ 259

[Close]
BLAST of Csa7G281390 vs. NCBI nr
Match: gi|778726350|ref|XP_004150395.2| (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 3.6e-148
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATVTA 265
           GKGIKLSIIEEARKRLASQATVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of Csa7G281390 vs. NCBI nr
Match: gi|802659484|ref|XP_012080847.1| (PREDICTED: 40S ribosomal protein S4-3 [Jatropha curcas])

HSP 1 Score: 515.8 bits (1327), Expect = 4.6e-143
Identity = 253/262 (96.56%), Postives = 258/262 (98.47%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATV 263
           GKGIKLSIIEEARKRLA+  TV
Sbjct: 241 GKGIKLSIIEEARKRLATAQTV 262

[Close]
BLAST of Csa7G281390 vs. NCBI nr
Match: gi|729395950|ref|XP_010553233.1| (PREDICTED: 40S ribosomal protein S4-3 isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 514.6 bits (1324), Expect = 1.0e-142
Identity = 251/259 (96.91%), Postives = 257/259 (99.23%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSF+TIHIQDATGHEFATR+GNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFDTIHIQDATGHEFATRMGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQ 260
           GKGIKLSIIEEARKRLASQ
Sbjct: 241 GKGIKLSIIEEARKRLASQ 259

[Close]
BLAST of Csa7G281390 vs. NCBI nr
Match: gi|643739357|gb|KDP45131.1| (hypothetical protein JCGZ_17463 [Jatropha curcas])

HSP 1 Score: 514.6 bits (1324), Expect = 1.0e-142
Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 1 

Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQATVTA 265
           GKGIKLSIIEEARKR A+ A   A
Sbjct: 241 GKGIKLSIIEEARKRQAAAAQTVA 264

[Close]
BLAST of Csa7G281390 vs. NCBI nr
Match: gi|729395947|ref|XP_010553232.1| (PREDICTED: 40S ribosomal protein S4-3 isoform X1 [Tarenaya hassleriana])

HSP 1 Score: 512.7 bits (1319), Expect = 3.9e-142
Identity = 250/258 (96.90%), Postives = 256/258 (99.22%), Query Frame = 1 

Query: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYREV
Sbjct: 3   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 62

Query: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK+
Sbjct: 63  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKF 122

Query: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNVV
Sbjct: 123 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 182

Query: 182 MVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241
           MVTGGRNRGRVGVIKNREKH GSF+TIHIQDATGHEFATR+GNVFTIGKGTKPWVSLPKG
Sbjct: 183 MVTGGRNRGRVGVIKNREKHKGSFDTIHIQDATGHEFATRMGNVFTIGKGTKPWVSLPKG 242

Query: 242 KGIKLSIIEEARKRLASQ 260
           KGIKLSIIEEARKRLASQ
Sbjct: 243 KGIKLSIIEEARKRLASQ 260

The following BLAST results are available for this feature:
BLAST of Csa7G281390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS4_CRIGR4.0e-10770.6640S ribosomal protein S4 OS=Cricetulus griseus GN=RPS4 PE=2 SV=2[more]
RS4X_MOUSE5.3e-10770.6640S ribosomal protein S4, X isoform OS=Mus musculus GN=Rps4x PE=1 SV=2[more]
RS4X_RAT5.3e-10770.6640S ribosomal protein S4, X isoform OS=Rattus norvegicus GN=Rps4x PE=2 SV=2[more]
RS4X_CHLAE5.3e-10770.6640S ribosomal protein S4, X isoform OS=Chlorocebus aethiops GN=RPS4X PE=2 SV=3[more]
RS4X_MESAU5.3e-10770.6640S ribosomal protein S4, X isoform OS=Mesocricetus auratus GN=RPS4X PE=2 SV=2[more]
BLAST of Csa7G281390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3Y8_CUCSA2.5e-148100.0040S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G281390 PE=3 SV=1[more]
A0A0A0K4K7_CUCSA2.4e-14698.4840S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G282410 PE=3 SV=1[more]
A0A0A0KQK7_CUCSA3.8e-14496.5940S ribosomal protein S4 OS=Cucumis sativus GN=Csa_5G212590 PE=3 SV=1[more]
A0A067K6J4_JATCU3.2e-14396.5640S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_16213 PE=3 SV=1[more]
A0A067L9J7_JATCU7.1e-14396.2140S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_17463 PE=3 SV=1[more]
BLAST of Csa7G281390 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58420.11.4e-14293.05 Ribosomal protein S4 (RPS4A) family protein[more]
AT5G07090.11.8e-14293.05 Ribosomal protein S4 (RPS4A) family protein[more]
AT2G17360.19.1e-14292.28 Ribosomal protein S4 (RPS4A) family protein[more]
BLAST of Csa7G281390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778726350|ref|XP_004150395.2|3.6e-148100.00PREDICTED: 40S ribosomal protein S4-3-like [Cucumis sativus][more]
gi|802659484|ref|XP_012080847.1|4.6e-14396.56PREDICTED: 40S ribosomal protein S4-3 [Jatropha curcas][more]
gi|729395950|ref|XP_010553233.1|1.0e-14296.91PREDICTED: 40S ribosomal protein S4-3 isoform X2 [Tarenaya hassleriana][more]
gi|643739357|gb|KDP45131.1|1.0e-14296.21hypothetical protein JCGZ_17463 [Jatropha curcas][more]
gi|729395947|ref|XP_010553232.1|3.9e-14296.90PREDICTED: 40S ribosomal protein S4-3 isoform X1 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000876Ribosomal_S4e
IPR002942S4_RNA-bd
IPR005824KOW
IPR013843Ribosomal_S4e_N
IPR013845Ribosomal_S4e_central_region
IPR018199Ribosomal_S4e_N_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088165cucumber EST collection version 3.0transcribed_cluster
CU088376cucumber EST collection version 3.0transcribed_cluster
CU095892cucumber EST collection version 3.0transcribed_cluster
CU132768cucumber EST collection version 3.0transcribed_cluster
CU141752cucumber EST collection version 3.0transcribed_cluster
CU166973cucumber EST collection version 3.0transcribed_cluster
CU177621cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G281390.1Csa7G281390.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU177621CU177621transcribed_cluster
CU095892CU095892transcribed_cluster
CU088165CU088165transcribed_cluster
CU141752CU141752transcribed_cluster
CU166973CU166973transcribed_cluster
CU088376CU088376transcribed_cluster
CU132768CU132768transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 7..238
score: 36
IPR000876Ribosomal protein S4ePIRPIRSF002116RPS4a_RPS4ecoord: 1..241
score: 4.6
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 2..264
score: 1.4E
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 47..90
score: 7.
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 42..106
score: 7.
IPR002942RNA-binding S4 domainPROFILEPS50889S4coord: 42..104
score: 9
IPR005824KOWPFAMPF00467KOWcoord: 177..210
score: 2.
IPR005824KOWSMARTSM00739kow_9coord: 174..201
score: 7.
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 3..39
score: 1.3
IPR013845Ribosomal protein S4e, central regionPRODOMPD002667coord: 87..176
score: 2.0
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 95..169
score: 1.4
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 8..22
scor
NoneNo IPR availablePANTHERPTHR11581:SF11SUBFAMILY NOT NAMEDcoord: 2..264
score: 1.4E