CSPI07G12070 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G12070
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description40S ribosomal protein S4
LocationChr7 : 10317808 .. 10320833 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAGATTCTGATTACCTGTTCATTTTGTTACATTATCATTTATTGTTTTATCTTATGCTCTCTGGATTTCTACATCCATGCTTGTGTTTTCCCGTCTTGGTATTCCAAATAAATAATTTTTTTTGTTTGAAATTAATGCCTATGGTTATGACAGGCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAATTAAATTAATGTGTATGTATGGGTTTGACAGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGTGAGTCAAATTTGTTGTTTTATTTGTTTTTCCTTTTTTTTCTGAGTTTATCAATCACAACGTTTAGTTTTATCTCTCTAATCTGTTTGTAGGCCCCCAAACCTTCATCTGGTCCTCATAAGTCGAGGGAATGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAGTATGCTCTCACGTACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACTGATAAGACTTTTCCTGCTGGTTTTATGGGTATGCTTATCTTAAACTTTGTAACCTAACTAGTGTTTTAGTTTAAATCATCCAATTTATACTTACCCTTTTACATTAGTGCCTCTACAGAAGTTGTTACAGATTGCTTGCTAAATTGGTTTTTTTATTCTCGAAATTGGCTGTTGATTTTGTGAACTGAATTGGGGAAATAATGGAGTGTTAACTCATCCATCCATATGGATATTGTCTTCTTTTGGTCTTATTGCTTTCCATGCTCTCATATTAGGCTATACCTAATGGTTGGTGGAGTTTATTTTATAAGTTGTATGTTATTTATTTTTGGTGGCTTGACTGTTAGCTCTCTATCGTCATTTTGGTTTAGCATTTTTAAACTATTCTTCGAAAAGTGTTGTCTGTGAATAGGAATGGGCCAAATAGTTAGGAATGCAACTATAGATATAGGTTTACCTGCCAAATTACCAAGTGGGAACAAAATGGTATTATTGATGATATATTCAAATGGTTTGATCGATAACTCATAAACGTGTCCTGCTTGGAACTGCTTTGTATCTATGTTGCTTCATGTTCTGTTTTTTTGCCTTTGTGTATACATTTTAAGCACATCACTAATTTTTGTCTCTCTCCCTCTTTAGACGTTGTGTCAATTCCCAAGACAAACGAAAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGGTTAGCCACTGTTCTTCTGATATTGACCTTTGACCTGCTGTTTATTACAATCTTGTTGTATAAAGTGTACTAGATTGAAAGAAAATTATATGCAATTAAAAAGGAGGTTTTGGCATCGATGGTTCATAAATCATAGGGTCGTTTAGCATTTGTCTGGTTGGATTAGTGTATTCTATAATCACTCTGCATTTGTTAGTTTGATTTTTTGAAGGTAGGTGCTCCTTTCAGATTCTTATCAATTACGGTAATGGAGGAAAATGAAACACTCTGAAGTAGGGGTAATAGTCGGTTTGGTTTGGTCGGTTTTGAAGCCAACCAATAACCAAACCTAACAAATCGGTTTCACATAAGGGATCCATACCAATGTCCAATAAAAAAACAAAATCAATGGATTGGTTTTATTTTGGATCAATTTATTATTGGTTTGATGCTTTGTTTTTGACATTTTCGTTTCTTCTTCCAAAGTTCAATCTTACTTTCCACTTTGGTTTGAATGTCATTTTTGGTAACTTTAAATTGAAATTTGGACTATTTCTTTCTTTATAAATTACAATTTGACATTTTTATTTTCTTATTTTTGGCAATTTTCTAAATAAAAAAAAATGCATGCTACATAATAATTAGTCTTTTTTTCTCTTAAGAACAAATAGTCATGCACCATAATAATTATAATACAAAAAGATACCTAATGACAGTGTATGTTTAGGGCTATATATCTACCATATGGTTCAGGTTTTCATTGGTTTTTCCCACAAAAATCCTATCCGAACCAATATGTTTTGTTTTTTTTTCCAATACAAACCAAGAAGTTCAATTTGGTACTAAAAAACTCAACCAAACAAACCATTGTTTCGGTTTAGATTGGTTTGGTTTTTTGACTTGGTTTTCTGTATGATTCCTACTCTGAAGTAACAGGCTGGAGATGCTGGACACTGTTTGTTTTCCATGATATAATTGGACGGTTCAAAGGTTGACTTTCACATTATTTTTTTGCAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTGGGAGTTATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACCGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACAATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAATTATCCATTATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCACAGTTACTGCTTAAGACTTAGTTTAGTGTAACGTAGTCATGGATGAAAGATTGGATTTTTCTTTTGTTTTTGTATAAGTAGATCTAGAAAAGGCTGATACACTTGGATATTTCTACTTCAACCGTGTGAAGCTACTGCTATGATTTTGTCATTCCAAGACTCTTTTCTTCATGAGGGCTACTTGTTTTTCTGGTAAATGGAAAAATCTTGACTTGTGTTCGATTTGTTAAATCTTGTTCAACCTTTTAAAGGATTACACATTCACAATAGATCGAATAATTCTATTGGAGCGGCAAAGGTTGAGTTTTACGAGAGGG

mRNA sequence

ATGCTCTCTGGATTTCTACATCCATGCTTGTGTTTTCCCGTCTTGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGTCCTCATAAGTCGAGGGAATGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAGTATGCTCTCACGTACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACTGATAAGACTTTTCCTGCTGGTTTTATGGACGTTGTGTCAATTCCCAAGACAAACGAAAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTGGGAGTTATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACCGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACAATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAATTATCCATTATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCACAGTTACTGCTTAA

Coding sequence (CDS)

ATGCTCTCTGGATTTCTACATCCATGCTTGTGTTTTCCCGTCTTGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGTCCTCATAAGTCGAGGGAATGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAGTATGCTCTCACGTACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACTGATAAGACTTTTCCTGCTGGTTTTATGGACGTTGTGTCAATTCCCAAGACAAACGAAAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTGGGAGTTATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACCGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACAATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAATTATCCATTATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCACAGTTACTGCTTAA
Homology
[Close]
BLAST of CSPI07G12070 vs. Swiss-Prot
Match: RS43_ARATH (40S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2)

HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-142
Identity = 241/259 (93.05%), Postives = 256/259 (98.84%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQ 274
           GKGIKL+IIEEARKRLASQ
Sbjct: 241 GKGIKLTIIEEARKRLASQ 259

[Close]
BLAST of CSPI07G12070 vs. Swiss-Prot
Match: RS42_ARATH (40S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4)

HSP 1 Score: 506.5 bits (1303), Expect = 1.8e-142
Identity = 241/259 (93.05%), Postives = 255/259 (98.46%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQ 274
           GKGIKL+IIEEARKRLASQ
Sbjct: 241 GKGIKLTIIEEARKRLASQ 259

[Close]
BLAST of CSPI07G12070 vs. Swiss-Prot
Match: RS4_SOLTU (40S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 3.1e-142
Identity = 241/264 (91.29%), Postives = 258/264 (97.73%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQR V+VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKL+IIE+ARKRLA+Q+   A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264

[Close]
BLAST of CSPI07G12070 vs. Swiss-Prot
Match: RS41_ARATH (40S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 9.1e-142
Identity = 239/259 (92.28%), Postives = 255/259 (98.46%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQ 274
           GKGIKL+IIEEARKRL++Q
Sbjct: 241 GKGIKLTIIEEARKRLSAQ 259

[Close]
BLAST of CSPI07G12070 vs. Swiss-Prot
Match: RS4_GOSHI (40S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 2.9e-140
Identity = 241/259 (93.05%), Postives = 252/259 (97.30%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKTNE+FRLLYDTKGRF LH++  +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQ 274
            KGIKLSIIEEARKRLA+Q
Sbjct: 241 RKGIKLSIIEEARKRLAAQ 259

[Close]
BLAST of CSPI07G12070 vs. TrEMBL
Match: A0A0A0K3Y8_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G281390 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 3.5e-148
Identity = 262/264 (99.24%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKLSIIEEARKRLASQATVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of CSPI07G12070 vs. TrEMBL
Match: A0A0A0K4K7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.3e-147
Identity = 260/264 (98.48%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12070 vs. TrEMBL
Match: A0A0A0KQK7_CUCSA (40S ribosomal protein S4 OS=Cucumis sativus GN=Csa_5G212590 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.1e-145
Identity = 255/264 (96.59%), Postives = 262/264 (99.24%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKL+IIEEARKRLASQ+ VTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]
BLAST of CSPI07G12070 vs. TrEMBL
Match: A0A067K6J4_JATCU (40S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_16213 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 1.8e-144
Identity = 253/262 (96.56%), Postives = 259/262 (98.85%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATV 277
           GKGIKLSIIEEARKRLA+  TV
Sbjct: 241 GKGIKLSIIEEARKRLATAQTV 262

[Close]
BLAST of CSPI07G12070 vs. TrEMBL
Match: F6GXU1_VITVI (40S ribosomal protein S4 OS=Vitis vinifera GN=VIT_08s0058g00390 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 2.3e-144
Identity = 252/276 (91.30%), Postives = 267/276 (96.74%), Query Frame = 1 

Query: 3   SGFLHPCLCFPVLARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIL 62
           SG+  P  C  +LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIL
Sbjct: 9   SGWHEPFSC--LLARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIL 68

Query: 63  RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGR 122
           RNRLKYALTYREVIAILMQRHVLVDGKVRTDKT+P+GFMDVVSIPKTNENFRLLYDTKGR
Sbjct: 69  RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGR 128

Query: 123 FRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNK 182
           FRLHS+RDEEAK+KLCKV+ VQFGQKGIPYLNTYDGRTIRYPDPLIKANDT+KLDLESNK
Sbjct: 129 FRLHSIRDEEAKFKLCKVKGVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTVKLDLESNK 188

Query: 183 IADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTI 242
           I DFIKFDVGNVVMVTGGRNRGRVGVIK+REKHKG+FETIH+QDATGHEFATRLGNVFTI
Sbjct: 189 IVDFIKFDVGNVVMVTGGRNRGRVGVIKSREKHKGTFETIHVQDATGHEFATRLGNVFTI 248

Query: 243 GKGTKPWVSLPKGKGIKLSIIEEARKRLASQATVTA 279
           GKGTKPWV+LPKGKGIKLSIIEEA+KRLA+QA+ TA
Sbjct: 249 GKGTKPWVTLPKGKGIKLSIIEEAKKRLAAQASATA 282

[Close]
BLAST of CSPI07G12070 vs. TAIR10
Match: AT5G58420.1 (AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 506.9 bits (1304), Expect = 7.9e-144
Identity = 241/259 (93.05%), Postives = 256/259 (98.84%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQ 274
           GKGIKL+IIEEARKRLASQ
Sbjct: 241 GKGIKLTIIEEARKRLASQ 259

[Close]
BLAST of CSPI07G12070 vs. TAIR10
Match: AT5G07090.1 (AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 506.5 bits (1303), Expect = 1.0e-143
Identity = 241/259 (93.05%), Postives = 255/259 (98.46%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQ 274
           GKGIKL+IIEEARKRLASQ
Sbjct: 241 GKGIKLTIIEEARKRLASQ 259

[Close]
BLAST of CSPI07G12070 vs. TAIR10
Match: AT2G17360.1 (AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein)

HSP 1 Score: 504.2 bits (1297), Expect = 5.1e-143
Identity = 239/259 (92.28%), Postives = 255/259 (98.46%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQ 274
           GKGIKL+IIEEARKRL++Q
Sbjct: 241 GKGIKLTIIEEARKRLSAQ 259

[Close]
BLAST of CSPI07G12070 vs. NCBI nr
Match: gi|778726350|ref|XP_004150395.2| (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 5.0e-148
Identity = 262/264 (99.24%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKH GSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHTGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKLSIIEEARKRLASQATVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of CSPI07G12070 vs. NCBI nr
Match: gi|449465362|ref|XP_004150397.1| (PREDICTED: 40S ribosomal protein S4-3 [Cucumis sativus])

HSP 1 Score: 530.4 bits (1365), Expect = 1.9e-147
Identity = 260/264 (98.48%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12070 vs. NCBI nr
Match: gi|659123125|ref|XP_008461503.1| (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 3.2e-147
Identity = 259/264 (98.11%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12070 vs. NCBI nr
Match: gi|659123052|ref|XP_008461463.1| (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 3.2e-147
Identity = 260/264 (98.48%), Postives = 263/264 (99.62%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVS+PK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSVPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of CSPI07G12070 vs. NCBI nr
Match: gi|659109681|ref|XP_008454823.1| (PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo])

HSP 1 Score: 524.2 bits (1349), Expect = 1.4e-145
Identity = 256/264 (96.97%), Postives = 262/264 (99.24%), Query Frame = 1 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQATVTA 279
           GKGIKL+IIEEARKRLASQA VTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

The following BLAST results are available for this feature:
BLAST of CSPI07G12070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS43_ARATH1.4e-14293.0540S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2[more]
RS42_ARATH1.8e-14293.0540S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4[more]
RS4_SOLTU3.1e-14291.2940S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1[more]
RS41_ARATH9.1e-14292.2840S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1[more]
RS4_GOSHI2.9e-14093.0540S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1[more]
BLAST of CSPI07G12070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3Y8_CUCSA3.5e-14899.2440S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G281390 PE=3 SV=1[more]
A0A0A0K4K7_CUCSA1.3e-14798.4840S ribosomal protein S4 OS=Cucumis sativus GN=Csa_7G282410 PE=3 SV=1[more]
A0A0A0KQK7_CUCSA2.1e-14596.5940S ribosomal protein S4 OS=Cucumis sativus GN=Csa_5G212590 PE=3 SV=1[more]
A0A067K6J4_JATCU1.8e-14496.5640S ribosomal protein S4 OS=Jatropha curcas GN=JCGZ_16213 PE=3 SV=1[more]
F6GXU1_VITVI2.3e-14491.3040S ribosomal protein S4 OS=Vitis vinifera GN=VIT_08s0058g00390 PE=3 SV=1[more]
BLAST of CSPI07G12070 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58420.17.9e-14493.05 Ribosomal protein S4 (RPS4A) family protein[more]
AT5G07090.11.0e-14393.05 Ribosomal protein S4 (RPS4A) family protein[more]
AT2G17360.15.1e-14392.28 Ribosomal protein S4 (RPS4A) family protein[more]
BLAST of CSPI07G12070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778726350|ref|XP_004150395.2|5.0e-14899.24PREDICTED: 40S ribosomal protein S4-3-like [Cucumis sativus][more]
gi|449465362|ref|XP_004150397.1|1.9e-14798.48PREDICTED: 40S ribosomal protein S4-3 [Cucumis sativus][more]
gi|659123125|ref|XP_008461503.1|3.2e-14798.11PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo][more]
gi|659123052|ref|XP_008461463.1|3.2e-14798.48PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo][more]
gi|659109681|ref|XP_008454823.1|1.4e-14596.97PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000876Ribosomal_S4e
IPR002942S4_RNA-bd
IPR005824KOW
IPR013843Ribosomal_S4e_N
IPR013845Ribosomal_S4e_central_region
IPR018199Ribosomal_S4e_N_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G12070.1CSPI07G12070.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 21..252
score: 36
IPR000876Ribosomal protein S4ePIRPIRSF002116RPS4a_RPS4ecoord: 15..255
score: 4.9
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 16..278
score: 1.2E
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 61..104
score: 8.
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 56..120
score: 7.
IPR002942RNA-binding S4 domainPROFILEPS50889S4coord: 56..118
score: 9
IPR005824KOWPFAMPF00467KOWcoord: 191..224
score: 1.
IPR005824KOWSMARTSM00739kow_9coord: 188..215
score: 7.
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 17..53
score: 1.4
IPR013845Ribosomal protein S4e, central regionPRODOMPD002667coord: 101..190
score: 3.0
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 109..183
score: 1.6
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 22..36
scor
NoneNo IPR availablePANTHERPTHR11581:SF11SUBFAMILY NOT NAMEDcoord: 16..278
score: 1.2E