Csa7G272090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G272090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 9637364 .. 9637760 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTTTTGGTGAATTTATAGCAGGGCAAACAGGTTTAAGCCATTTGAAAAAGGTAGATGAGTTGTGTTTTTCACCATACAACATGAACGATAATAGTTAGTTGGGAGAGGCAGTTCATGCCTCAAAATGCTTTTGTTCTTTAATCATTACAGTTTTCGTTGAATAAAAATGCATTTTTTGATGGCCAGCTTTGTAGAAAAAGAGCCACAATTAATAAAGGAATGAGATTAGGAATTTCATACCAAAAGTACAAGAATGAGAAGTTCCACATCAGCAGAACTTTGCTCCAGCCTCAAGAACCACAACTAGTTGGGCATAAATGCAAGAGCAGGTTTGTTGTTTCCCTATTTGAGAAATTCAATTTTAGTGAGACAATAATAACAAAGTGGTGA

mRNA sequence

ATGGAGATTTTTGGTGAATTTATAGCAGGGCAAACAGGTTTAAGCCATTTGAAAAAGTTTTCGTTGAATAAAAATGCATTTTTTGATGGCCAGCTTTGTAGAAAAAGAGCCACAATTAATAAAGGAATGAGATTAGGAATTTCATACCAAAAGTACAAGAATGAGAAGTTCCACATCAGCAGAACTTTGCTCCAGCCTCAAGAACCACAACTAGTTGGGCATAAATGCAAGAGCAGGTTTGTTGTTTCCCTATTTGAGAAATTCAATTTTAGTGAGACAATAATAACAAAGTGGTGA

Coding sequence (CDS)

ATGGAGATTTTTGGTGAATTTATAGCAGGGCAAACAGGTTTAAGCCATTTGAAAAAGTTTTCGTTGAATAAAAATGCATTTTTTGATGGCCAGCTTTGTAGAAAAAGAGCCACAATTAATAAAGGAATGAGATTAGGAATTTCATACCAAAAGTACAAGAATGAGAAGTTCCACATCAGCAGAACTTTGCTCCAGCCTCAAGAACCACAACTAGTTGGGCATAAATGCAAGAGCAGGTTTGTTGTTTCCCTATTTGAGAAATTCAATTTTAGTGAGACAATAATAACAAAGTGGTGA

Protein sequence

MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHISRTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW*
Homology
[Close]
BLAST of Csa7G272090 vs. TrEMBL
Match: A0A0A0K981_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272090 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60
          MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS
Sbjct: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60

Query: 61 RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 99
          RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW
Sbjct: 61 RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 98

[Close]
BLAST of Csa7G272090 vs. NCBI nr
Match: gi|700189133|gb|KGN44366.1| (hypothetical protein Csa_7G272090 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60
          MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS
Sbjct: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60

Query: 61 RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 99
          RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW
Sbjct: 61 RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 98

The following BLAST results are available for this feature:
BLAST of Csa7G272090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K981_CUCSA1.7e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272090 PE=4 SV=1[more]
BLAST of Csa7G272090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189133|gb|KGN44366.1|2.4e-49100.00hypothetical protein Csa_7G272090 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G272090.1Csa7G272090.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G272090CSPI07G11770Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G272090Melon (DHL92) v3.6.1cumedB504
Csa7G272090Watermelon (97103) v2cuwmbB568
Csa7G272090Wax gourdcuwgoB703
Csa7G272090Cucumber (Gy14) v1cgycuB348
Csa7G272090Cucurbita maxima (Rimu)cmacuB046
Csa7G272090Cucurbita maxima (Rimu)cmacuB495
Csa7G272090Cucurbita moschata (Rifu)cmocuB036
Csa7G272090Cucurbita moschata (Rifu)cmocuB484
Csa7G272090Melon (DHL92) v3.5.1cumeB524
Csa7G272090Watermelon (97103) v1cuwmB565
Csa7G272090Cucurbita pepo (Zucchini)cpecuB471
Csa7G272090Bottle gourd (USVL1VR-Ls)culsiB514
Csa7G272090Cucumber (Gy14) v2cgybcuB323