CSPI07G11770 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G11770
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 9992258 .. 9992654 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTTTTGGTGAATTTATAGCAGGGCAAACAGGTTTAAGCCATTTGAAAAAGGTAGATGAGTTGTGTTTTTCACCATACAACATGAACGATAATAGTTAGTTGGGAGAGGCAGTTCATGCCTCAAAATGCTTTTGTTCTTTAATCATTACAGTTTTCGTTGAATAAAAATGCATTTTTAGATGGCCAGCTTTGTAGAAAAAGAGCCACAATTAATAAAGGAATGAGATTAGGAATTTCATACCAAAAGTACAAGAATGAGAAGTTCCACATCAGCAGAACTTTGCTCCATCCTCAAGAACCACAACTAGTTGGGCATAAATGCAAGAGCAGGTTTGTTGTTTCCCTATTTGAGAAATTCAATTTTAGTGAGACAATAATAACAAAGTGGTGA

mRNA sequence

ATGGAGATTTTTGGTGAATTTATAGCAGGGCAAACAGGTTTAAGCCATTTGAAAAAGTTTTCGTTGAATAAAAATGCATTTTTAGATGGCCAGCTTTGTAGAAAAAGAGCCACAATTAATAAAGGAATGAGATTAGGAATTTCATACCAAAAGTACAAGAATGAGAAGTTCCACATCAGCAGAACTTTGCTCCATCCTCAAGAACCACAACTAGTTGGGCATAAATGCAAGAGCAGGTTTGTTGTTTCCCTATTTGAGAAATTCAATTTTAGTGAGACAATAATAACAAAGTGGTGA

Coding sequence (CDS)

ATGGAGATTTTTGGTGAATTTATAGCAGGGCAAACAGGTTTAAGCCATTTGAAAAAGTTTTCGTTGAATAAAAATGCATTTTTAGATGGCCAGCTTTGTAGAAAAAGAGCCACAATTAATAAAGGAATGAGATTAGGAATTTCATACCAAAAGTACAAGAATGAGAAGTTCCACATCAGCAGAACTTTGCTCCATCCTCAAGAACCACAACTAGTTGGGCATAAATGCAAGAGCAGGTTTGTTGTTTCCCTATTTGAGAAATTCAATTTTAGTGAGACAATAATAACAAAGTGGTGA
Homology
[Close]
BLAST of CSPI07G11770 vs. TrEMBL
Match: A0A0A0K981_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272090 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-48
Identity = 96/98 (97.96%), Postives = 96/98 (97.96%), Query Frame = 1 

Query: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFLDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60
          MEIFGEFIAGQTGLSHLKKFSLNKNAF DGQLCRKRATINKGMRLGISYQKYKNEKFHIS
Sbjct: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60

Query: 61 RTLLHPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 99
          RTLL PQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW
Sbjct: 61 RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 98

[Close]
BLAST of CSPI07G11770 vs. NCBI nr
Match: gi|700189133|gb|KGN44366.1| (hypothetical protein Csa_7G272090 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 96/98 (97.96%), Postives = 96/98 (97.96%), Query Frame = 1 

Query: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFLDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60
          MEIFGEFIAGQTGLSHLKKFSLNKNAF DGQLCRKRATINKGMRLGISYQKYKNEKFHIS
Sbjct: 1  MEIFGEFIAGQTGLSHLKKFSLNKNAFFDGQLCRKRATINKGMRLGISYQKYKNEKFHIS 60

Query: 61 RTLLHPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 99
          RTLL PQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW
Sbjct: 61 RTLLQPQEPQLVGHKCKSRFVVSLFEKFNFSETIITKW 98

The following BLAST results are available for this feature:
BLAST of CSPI07G11770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G11770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K981_CUCSA1.4e-4897.96Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272090 PE=4 SV=1[more]
BLAST of CSPI07G11770 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G11770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189133|gb|KGN44366.1|2.1e-4897.96hypothetical protein Csa_7G272090 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G11770.1CSPI07G11770.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G11770Csa7G272090Cucumber (Chinese Long) v2cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G11770Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G11770Bottle gourd (USVL1VR-Ls)cpilsiB528
CSPI07G11770Melon (DHL92) v3.6.1cpimedB515
CSPI07G11770Cucumber (Gy14) v2cgybcpiB331
CSPI07G11770Cucumber (Chinese Long) v3cpicucB414
CSPI07G11770Watermelon (97103) v2cpiwmbB594
CSPI07G11770Wax gourdcpiwgoB714
CSPI07G11770Wax gourdcpiwgoB718
CSPI07G11770Cucumber (Gy14) v1cgycpiB364
CSPI07G11770Cucurbita maxima (Rimu)cmacpiB500
CSPI07G11770Cucurbita moschata (Rifu)cmocpiB039
CSPI07G11770Cucurbita moschata (Rifu)cmocpiB490
CSPI07G11770Melon (DHL92) v3.5.1cpimeB532
CSPI07G11770Watermelon (Charleston Gray)cpiwcgB550
CSPI07G11770Watermelon (97103) v1cpiwmB582
CSPI07G11770Cucurbita pepo (Zucchini)cpecpiB471