Csa7G269030 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G269030
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 9532244 .. 9532852 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTGTACTATCAAAATTTTCAGGTTAAGAAATTTATCTTATCTGCTTTTGTTTTTTGCATCAGATCATATGGGTATCTCCAAGAAAAACATGTTGGTGTTTGTTGGTGTTCTTCTTATTAGCACAACTCTAATTGAAATTACAAAAGCAACGACGACAAGAACCAGAGATTATGGTCCTCTTGATCAAGGTGTGGAGATCGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAATTCAGTTGATGATTGCAAAACTCTAAAAAGTAAGACCAATTTTAATGGCCAATCGCCAAATATGGCTCCTCAAAGCTCACAATCGCCAAATATGGCTCCTCAAAGCTCACAAGGAGTTTAAGGAGATAAAAATGTTGGTTTTCCTTCACCATATATGAATTAAATTCATGTGTATTCTTTATTATTTTTTAATGTTTTGTTCTTCCATGTGAGTTGCAATCTCACTAAATTAAATATCACAGTTCTTTATTTTATGATTTTTTTCTGACATTTTACTAAATTGTTTCCAGTTTATTTTATGTTTTGTTCGTATATGGAAACAATAACAACCATTAACCCT

mRNA sequence

ATGGGTATCTCCAAGAAAAACATGTTGGTGTTTGTTGGTGTTCTTCTTATTAGCACAACTCTAATTGAAATTACAAAAGCAACGACGACAAGAACCAGAGATTATGGTCCTCTTGATCAAGGTGTGGAGATCGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAATTCAGTTGATGATTGCAAAACTCTAAAAAGTAAGACCAATTTTAATGGCCAATCGCCAAATATGGCTCCTCAAAGCTCACAATCGCCAAATATGGCTCCTCAAAGCTCACAAGGAGTTTAA

Coding sequence (CDS)

ATGGGTATCTCCAAGAAAAACATGTTGGTGTTTGTTGGTGTTCTTCTTATTAGCACAACTCTAATTGAAATTACAAAAGCAACGACGACAAGAACCAGAGATTATGGTCCTCTTGATCAAGGTGTGGAGATCGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAATTCAGTTGATGATTGCAAAACTCTAAAAAGTAAGACCAATTTTAATGGCCAATCGCCAAATATGGCTCCTCAAAGCTCACAATCGCCAAATATGGCTCCTCAAAGCTCACAAGGAGTTTAA

Protein sequence

MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYANDESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQGV*
Homology
[Close]
BLAST of Csa7G269030 vs. TrEMBL
Match: A0A0A0K7P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G269030 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.7e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60
           MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN
Sbjct: 1   MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60

Query: 61  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQGV 107
           DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQGV
Sbjct: 61  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQGV 106

[Close]
BLAST of Csa7G269030 vs. TrEMBL
Match: A0A0A0K4C8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G269040 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-32
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = 1 

Query: 1   MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60
           M I+KKNM VFVG+LLISTTLIEITKATT R+ +YG   QGVEIVCSPEDPRVF+LHYAN
Sbjct: 1   MDITKKNMFVFVGLLLISTTLIEITKATT-RSMNYGA-PQGVEIVCSPEDPRVFRLHYAN 60

Query: 61  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQ 105
           DESSEYN+VDDC TLKS  NF+G+S N+ P  S S N+APQ+SQ
Sbjct: 61  DESSEYNAVDDCATLKSNLNFDGRSQNV-PAQSPSQNVAPQTSQ 101

[Close]
BLAST of Csa7G269030 vs. NCBI nr
Match: gi|700189124|gb|KGN44357.1| (hypothetical protein Csa_7G269030 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 6.7e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60
           MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN
Sbjct: 1   MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60

Query: 61  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQGV 107
           DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQGV
Sbjct: 61  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQGV 106

[Close]
BLAST of Csa7G269030 vs. NCBI nr
Match: gi|700189125|gb|KGN44358.1| (hypothetical protein Csa_7G269040 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-32
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = 1 

Query: 1   MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60
           M I+KKNM VFVG+LLISTTLIEITKATT R+ +YG   QGVEIVCSPEDPRVF+LHYAN
Sbjct: 1   MDITKKNMFVFVGLLLISTTLIEITKATT-RSMNYGA-PQGVEIVCSPEDPRVFRLHYAN 60

Query: 61  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQSPNMAPQSSQ 105
           DESSEYN+VDDC TLKS  NF+G+S N+ P  S S N+APQ+SQ
Sbjct: 61  DESSEYNAVDDCATLKSNLNFDGRSQNV-PAQSPSQNVAPQTSQ 101

The following BLAST results are available for this feature:
BLAST of Csa7G269030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7P8_CUCSA4.7e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G269030 PE=4 SV=1[more]
A0A0A0K4C8_CUCSA4.6e-3274.04Uncharacterized protein OS=Cucumis sativus GN=Csa_7G269040 PE=4 SV=1[more]
BLAST of Csa7G269030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189124|gb|KGN44357.1|6.7e-53100.00hypothetical protein Csa_7G269030 [Cucumis sativus][more]
gi|700189125|gb|KGN44358.1|6.5e-3274.04hypothetical protein Csa_7G269040 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU098685cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G269030.1Csa7G269030.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU098685CU098685transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G269030MELO3C012518Melon (DHL92) v3.5.1cumeB533
Csa7G269030Cla97C02G031930Watermelon (97103) v2cuwmbB531
Csa7G269030Bhi05G001097Wax gourdcuwgoB664
Csa7G269030CSPI07G11650Wild cucumber (PI 183967)cpicuB354
Csa7G269030CsGy7G010900Cucumber (Gy14) v2cgybcuB323
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G269030Watermelon (97103) v2cuwmbB521
Csa7G269030Wax gourdcuwgoB684
Csa7G269030Cucumber (Chinese Long) v2cucuB081
Csa7G269030Cucumber (Gy14) v1cgycuB135
Csa7G269030Cucumber (Gy14) v1cgycuB348
Csa7G269030Cucurbita maxima (Rimu)cmacuB155
Csa7G269030Cucurbita maxima (Rimu)cmacuB495
Csa7G269030Cucurbita maxima (Rimu)cmacuB530
Csa7G269030Cucurbita maxima (Rimu)cmacuB645
Csa7G269030Cucurbita moschata (Rifu)cmocuB141
Csa7G269030Cucurbita moschata (Rifu)cmocuB484
Csa7G269030Cucurbita moschata (Rifu)cmocuB634
Csa7G269030Watermelon (Charleston Gray)cuwcgB536
Csa7G269030Watermelon (Charleston Gray)cuwcgB548
Csa7G269030Watermelon (97103) v1cuwmB606
Csa7G269030Watermelon (97103) v1cuwmB611
Csa7G269030Cucurbita pepo (Zucchini)cpecuB260
Csa7G269030Cucurbita pepo (Zucchini)cpecuB698
Csa7G269030Cucurbita pepo (Zucchini)cpecuB767
Csa7G269030Bottle gourd (USVL1VR-Ls)culsiB491
Csa7G269030Bottle gourd (USVL1VR-Ls)culsiB496
Csa7G269030Cucumber (Gy14) v2cgybcuB092
Csa7G269030Melon (DHL92) v3.6.1cumedB512
Csa7G269030Silver-seed gourdcarcuB0195
Csa7G269030Silver-seed gourdcarcuB0343
Csa7G269030Silver-seed gourdcarcuB0908