Csa7G200820 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G200820
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Protein transport protein SFT2; contains IPR007305 (Vesicle transport protein, Got1/SFT2-like)
Location	Chr7 : 7184024 .. 7187651 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGCTTTGGCCTTCGTGCTTGAGTACAGGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAATTTCCAATCTGCAACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATTTTCATTGCGTTTACAATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTTACCCTTGGATGTTGCTTCATAATTGGATCGTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGGTATGCTTGATATTTCTTTTATTACATTTCTATCAAAACCCTGTCGATATTTTAGCTGATTCTCTTCTGTTATTTGTTCCTTTATTTTATGATGCAGAGACTTCCTTTTACAGTGATCTTTATTGGTAGTATGTTGGGCACCTTATATGTTTCCATGGGCCTCCACAGCTATATCCTTTCAGTTTTCTTCTCTGTATTACAGGTATTTAAACAAAATACTTTATCTTTATTCGTTATTGTGCAAACTTTTATTCCCATCATCCAGTTAGTATCTGTCTACTTCATATTAGTGATGTAATTAATTTAGTTAGTTTTCTTAATTGTTAAGGTTTAGTTTCCTAATTGTCTCAGTTAAAGGTTTAGTTTCCTTTTCAGTTTCATAATTGTCTTGTTTAATTTCCTTTTCAGTTTCTTAATTGTCTTAGTTAAAGATTTAGTTTCCCTTTTAGTTTTAGGTTTGTAACATATGGAATTAGGCTATAAAACGGCCTCTTCTCCATCCTTTTCCATTGATTCAATAATTGAAGTAATTTTTAAAAGAAACAAATTTACCAAGATTTAAAGCATTAGTTTTGGGTCCTTAAACTTTAAAAAGTATCTAATAGGTCTTTGCACTTTTAATTTAGTATTTAAAAGTTACAATTTCCTGAGCTTTGAAATTGTAGATTACATCTCCAACATTTTGAAAATTTTAAAATGTTGCTAATATTAGGTATAAAGTTTAATTTTATGTCTAATAAGACCTTAAACTTTTTTGAATAAGAAACATTTCACTAATGAACGAAATGTTCGAAAGCATAACCGAAAGCCATGTATTACAGGGAATACAAAAGATTTGTCCAATTTGCAGCAAGAAAACTTAAATTGTGATCTTTAAGATGCTGTAACTGTTTTCACCAATAAAGAGCATTGAAAATGGGCTTCTATGATAATAATCCCTAAGCTTTCAGTATAGTGTCTAGTTGGTCCATGAATTTAATAAATGTCAAGTAGGTCAAGGGCCTATTTTTACTTTTGAAAAGAAAACATTTTCATTTATTGGTATAAAATAAGGCAAAAGCTAATAGTACAAGAGGATTATACAATGAGCAAAAGCAAAAACAGAAAAAAAAAGATTAGGAGGTGCACTCGAGCATCTCAACTAGGTTGACACCCCCTTAGCATCCTTATCACACCCAACAAAATAAATAGAGTTCAAGTGGGGGCTACACACAGCCAATACAAACCAATAAGAAACATTCAAATAAATCTAACAATTCTAGGAATAGACTGGCAAAAAGGAGCTGCCAAAAGGAGAATCATCAGAGGGTGTTGCCCAAATCTGGATCTTCAATCAAGGAGGAAGGATGAAGGCCTGCCAATTTTAGATGTCTTGCATTGAGGCGTTGAACCGTTTGCTTAGAGAGCACCACGAGGAGGCATTCAGCCGTGCCAACTCATATCTGTCATGCCAATAGGGAGATTTATTTTGAAAGACCCGTTGGTTTCTCTCGAACCATATTTCTGCCAAGATTGCCTTGATAGCATTGCACCAAAGCAAGGATGCAATTTTCCTTGTAAGTGGCTGTCTAACATTATTCTTGGAGTCTTTATCAAGGGACCAGCTGAGATTAAAGGTGTGAAGGGCCTATTAGATATAAAATTGAAATATCAAGTACCCATTAGACAGAAAATTGAATGTTTAAGAACCTATTAGACATTTTAGAGCCTAATTCCTATTCATGGTTTTGATTCCATGGAGATTAGACTTGTCTCCTATCTTTTAATTCCAACGGAAATTCTGAAATTAGTTTGAGTAGCGTGGACCTTAAACTTTTTATGGAATATGTATAGAAGGGAGACCAGTCCAATCTCCATCTGAATCGACCATGAAAGAGTGTTTCAAAGATCCTTATCTTGTGGACTCTTTTGCAGGAGTTATTTAAGGATGTCCAAGATAATTTCACTGTGGCTTCTCAACTTTTATTGCTGAGATATAGAAGATGTGCACATCCGAAAAAAAAATCAGATACTTTCAAATTATGTATCGGTCATGTTTCAGCCACGTATTTGAATCTATTCCTATAGATATGTATCTAACATTCATTCACTGCTTAGTTTAAAGTATTTGTGATTCATAGATGTGATGATGTGATCTAAGGCCTTGTTATCTTAGTAGCATAGGCAGCATAGCGAGGGGCCGAGAGTCTAGTAGGCAGCTTTTCTTTGCATCTTATCAACAGTGTTCAAGCTTATATAGGTGGACTAAAAGAATTTCAGCTTTTCTGGGACTTAAATCTGTCAGATGTAGTCCACGAGAGGGCTTCAACTTTGCCTCAGGTGTTTTAGTATAGTGAACGAGGGCTGATTCTGCTGGGAAACCATCCGAAGCCTAGCTTTCAATAAATTTGTGTCGTGGACATGAGGACTACATTGCCTCAGGTGTTTTAGTGTTCAAGCTTCCTAATTTGAACAGCATCCACCTTCGCTGTTTAATTTCATAACCTCTTTCGAATGATTCTCTTCTTAGTTGACATCATCCCAACAATCAATCAGCTAGCTTTTCTTTTTTAATCTTTTTTGGAGTTGGTGCATTAGAACTTCAGGAAGAGAATACTGTTTGATCACATAATTCTACATGATATGCACGCCTATCTTAACCAATAGTATATTGATAGGAATGCTATAAGGGTATTAAGAGTATATTAGCAATCAGCTAGGAGTTGTTATGTTTGCTGGTTATAAATGGAGTCAGTGGATTAGGATTTGAGAGTCCGTCCTCTCAAGAAGGGAGAGTTTAAGAATGTCTTGTAGTTCTAATATTTATATATTTCATGCATTTCCGATTTCCCGTTTCTTTATCATACATGACACAGTTGGTCCAAATTGAAACGTTGAGGTTTCTCCAGGTTCTTGCACTTGCATACTATGCTGTTTCATATTTTCCTGGAGGTTCTACTGGGATGAAGTTTCTGTCATCTGCTCTTACGTCTTCTGTAACGAAATGTTTCGGCAGGTGATCTCAACTCCACTGTGGTGTTCAGTTGGTGTACTGCACATTTCTCTCCTAACTAGAGATCTATGTTAAAGTTCGTAAAGTTTTGGAATTTGCTGAATGTACAAACCAAAAGTATTAGCAACAGGCACCATTTTTCTGTATTCCTATTTGGTTGTTTCATCCCCATCATCACATTGACTGAGCTATTTTGCAACTGTAGAGAGAGGTCAATTAATGGGGACAAAGTTGTGAAGGCTTTGGGGCATTAATGTTGCTATTTTCTACCAATGCCATCACAATTTGAAGGCAATAGAGAATGAAATTAGATTACTTTTTTTTTTTTTCAAAAAT

mRNA sequence

ATGTATGCTTTGGCCTTCGTGCTTGAGTACAGGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAATTTCCAATCTGCAACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATTTTCATTGCGTTTACAATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTTACCCTTGGATGTTGCTTCATAATTGGATCGTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGAGACTTCCTTTTACAGTGATCTTTATTGGTAGTATGTTGGGCACCTTATATGTTTCCATGGGCCTCCACAGCTATATCCTTTCAGTTTTCTTCTCTGTATTACAGGTTCTTGCACTTGCATACTATGCTGTTTCATATTTTCCTGGAGGTTCTACTGGGATGAAGTTTCTGTCATCTGCTCTTACGTCTTCTGTAACGAAATGTTTCGGCAGGTGA

Coding sequence (CDS)

ATGTATGCTTTGGCCTTCGTGCTTGAGTACAGGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAATTTCCAATCTGCAACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATTTTCATTGCGTTTACAATGTTCCTCCCTGTCATGGTTCTGATGCCTCAAAAGTTTGCCATCTGCTTTACCCTTGGATGTTGCTTCATAATTGGATCGTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGAGACTTCCTTTTACAGTGATCTTTATTGGTAGTATGTTGGGCACCTTATATGTTTCCATGGGCCTCCACAGCTATATCCTTTCAGTTTTCTTCTCTGTATTACAGGTTCTTGCACTTGCATACTATGCTGTTTCATATTTTCCTGGAGGTTCTACTGGGATGAAGTTTCTGTCATCTGCTCTTACGTCTTCTGTAACGAAATGTTTCGGCAGGTGA

Protein sequence

MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR*

Homology

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BLAST of Csa7G200820 vs. Swiss-Prot
Match: SFT2_YEAST (Protein transport protein SFT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFT2 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.3e-17
Identity = 45/129 (34.88%), Postives = 75/129 (58.14%), Query Frame = 1


Query: 36  LMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAH 95
           ++ F  FL  G    F   T   PV+   P+KF + +T+G    + +F  L GP   L H
Sbjct: 81  MVLFVCFLL-GATACFTLCTFLFPVLAAKPRKFGLLWTMGSLLFVLAFGVLMGPLAYLKH 140

Query: 96  MFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMK 155
           + ++ERLPF++ F  +   T+Y +    + +L++  ++L+++A+ YYA+SYFP G+TG++
Sbjct: 141 LTARERLPFSMFFFATCFMTIYFAAFSKNTVLTITCALLELVAVIYYAISYFPFGATGLR 200

Query: 156 FLSSALTSS 165
            LSSA  +S
Sbjct: 201 MLSSAGVNS 208

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BLAST of Csa7G200820 vs. Swiss-Prot
Match: SFT2_SCHPO (Protein transport protein sft2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sft2 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-13
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 1


Query: 13  SKGVRELPGN-------FQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMP 72
           S    E+P N       FQS+  ++   +  M FG+ L   +    IA  MF PV+VL P
Sbjct: 38  SNDYTEIPTNASGGNSYFQSSEFSLSRWERYMLFGICLLGSLACYAIACFMF-PVLVLKP 97

Query: 73  QKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSY 132
           +KF + +T+G    +  F  ++G       + + ERLP T+ +  ++L T+  ++ + S 
Sbjct: 98  RKFVLLWTMGSLLAVLGFAIVQGFVAHFRQLTTMERLPITLSYFVTLLATIIATIKIKST 157

Query: 133 ILSVFFSVLQVLALAYYAVSYFPGG----STGMKFLSSALTS 164
           ILS+ F VL +L+   Y +++FP G    S G +  S +L++
Sbjct: 158 ILSIVFGVLHILSFVAYLIAFFPFGTRTVSLGTRMASRSLSN 198

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BLAST of Csa7G200820 vs. Swiss-Prot
Match: SFT2A_HUMAN (Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08
Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1


Query: 28  SNVPSGKALMYFGLFLATGVFFIFIAF-TMFLPVMVLMPQKFAICFTLGCCFIIGSFFAL 87
           S++     L +F +    GVFF  +    ++LP  + +   FA+ +TLG    + S   L
Sbjct: 26  SSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGGIKL---FAVFYTLGNLAALASTCFL 85

Query: 88  KGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSY 147
            GP  QL  MF   RL  T++ +   + TL  ++  H   L+V F +LQ L++ +Y++SY
Sbjct: 86  MGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSY 144

Query: 148 FP 149
            P
Sbjct: 146 IP 144

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BLAST of Csa7G200820 vs. Swiss-Prot
Match: SFT2A_MOUSE (Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 37/122 (30.33%), Postives = 62/122 (50.82%), Query Frame = 1


Query: 28  SNVPSGKALMYFGLFLATGVFFIFIAF-TMFLPVMVLMPQKFAICFTLGCCFIIGSFFAL 87
           S++     L +F +    G+FF F+    ++LP  + +   FA+ +TLG    + S   L
Sbjct: 26  SSLSFNTRLKWFVICFVAGIFFSFLGTGLLWLPNGMKL---FAVFYTLGNLAALASTCFL 85

Query: 88  KGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSY 147
            GP  QL  MF   RL  T+I +  ++ TL  ++      L++ F +LQ L++ +Y++SY
Sbjct: 86  MGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFCILQFLSMTWYSLSY 144

Query: 148 FP 149
            P
Sbjct: 146 IP 144

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BLAST of Csa7G200820 vs. Swiss-Prot
Match: SFT2A_RAT (Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 37/122 (30.33%), Postives = 61/122 (50.00%), Query Frame = 1


Query: 28  SNVPSGKALMYFGLFLATGVFFIFIAF-TMFLPVMVLMPQKFAICFTLGCCFIIGSFFAL 87
           S++     L +F +    G+FF  +    ++LP  V +   FA+ +TLG    + S   L
Sbjct: 26  SSLSFNTRLKWFVICFVAGIFFSILGTGLLWLPNGVKL---FAVFYTLGNLAALASTCFL 85

Query: 88  KGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSY 147
            GP  QL  MF   RL  T+I +  ++ TL  ++      L++ F +LQ L++ +Y++SY
Sbjct: 86  MGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFCILQFLSMTWYSLSY 144

Query: 148 FP 149
            P
Sbjct: 146 IP 144

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BLAST of Csa7G200820 vs. TrEMBL
Match: A0A0A0K5A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G200820 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.0e-91
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 60
           MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 1   MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 60

Query: 61  MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 120
           MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM
Sbjct: 61  MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 120

Query: 121 GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR
Sbjct: 121 GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 171

[Close]

BLAST of Csa7G200820 vs. TrEMBL
Match: A0A0D2U527_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G451900 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.0e-73
Identity = 137/160 (85.62%), Postives = 153/160 (95.62%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR++PGNFQSATS+VPSGKAL+YFGLFLA+G+FF+FIAFTMFLPVMV+MPQKFAIC
Sbjct: 63  VSKGVRDIPGNFQSATSSVPSGKALLYFGLFLASGIFFVFIAFTMFLPVMVIMPQKFAIC 122

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFAL+GPKNQLAHM SKERLPFT+ FIGSM+GT+YVSM LHSYILSV F
Sbjct: 123 FTLGCGFIIGSFFALRGPKNQLAHMSSKERLPFTLGFIGSMVGTIYVSMVLHSYILSVLF 182

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYA+SYFPGGS G+KFL+SALTSS+T CFGR
Sbjct: 183 SVLQVLALAYYAISYFPGGSAGLKFLTSALTSSITSCFGR 222

[Close]

BLAST of Csa7G200820 vs. TrEMBL
Match: A0A0D2SIZ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G451900 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.0e-73
Identity = 137/160 (85.62%), Postives = 153/160 (95.62%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR++PGNFQSATS+VPSGKAL+YFGLFLA+G+FF+FIAFTMFLPVMV+MPQKFAIC
Sbjct: 12  VSKGVRDIPGNFQSATSSVPSGKALLYFGLFLASGIFFVFIAFTMFLPVMVIMPQKFAIC 71

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFAL+GPKNQLAHM SKERLPFT+ FIGSM+GT+YVSM LHSYILSV F
Sbjct: 72  FTLGCGFIIGSFFALRGPKNQLAHMSSKERLPFTLGFIGSMVGTIYVSMVLHSYILSVLF 131

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYA+SYFPGGS G+KFL+SALTSS+T CFGR
Sbjct: 132 SVLQVLALAYYAISYFPGGSAGLKFLTSALTSSITSCFGR 171

[Close]

BLAST of Csa7G200820 vs. TrEMBL
Match: A0A059BWI4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03671 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.3e-73
Identity = 139/160 (86.88%), Postives = 147/160 (91.88%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSA S VPSGKALMYFGLFLA+GVFFI IAFTMFLPVMVLMPQKFAIC
Sbjct: 89  VSKGVRELPGNFQSAASTVPSGKALMYFGLFLASGVFFIVIAFTMFLPVMVLMPQKFAIC 148

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGP NQL+HM SKERLPFTV F+GSM+GT+YVSM LHSYILSV F
Sbjct: 149 FTLGCCFIIGSFFALKGPMNQLSHMSSKERLPFTVGFVGSMVGTIYVSMVLHSYILSVLF 208

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           S+LQVLAL YY +SYFPGGS GMKFLSS LTSSV +CFGR
Sbjct: 209 SILQVLALVYYVISYFPGGSAGMKFLSSTLTSSVMRCFGR 248

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BLAST of Csa7G200820 vs. TrEMBL
Match: D7UAN0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01110 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.3e-73
Identity = 137/160 (85.62%), Postives = 151/160 (94.38%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR+LPGN QSATSNVPSG++LMYFG+ LATGVFF+FIAFTMFLPVMVLMPQKFA+C
Sbjct: 73  VSKGVRDLPGNIQSATSNVPSGRSLMYFGILLATGVFFVFIAFTMFLPVMVLMPQKFALC 132

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FT+GC FIIGSFFALKGPKNQLAHM +KERLPFT+ FIGSM+GT+YVSM LHSYILSV F
Sbjct: 133 FTIGCSFIIGSFFALKGPKNQLAHMSTKERLPFTLGFIGSMVGTIYVSMVLHSYILSVLF 192

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYA+SYFPGGS G+KFLSSALTSS+ KCFGR
Sbjct: 193 SVLQVLALAYYAISYFPGGSAGLKFLSSALTSSILKCFGR 232

[Close]

BLAST of Csa7G200820 vs. TAIR10
Match: AT4G26550.1 (AT4G26550.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 262.3 bits (669), Expect = 2.1e-70
Identity = 130/160 (81.25%), Postives = 143/160 (89.38%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR++PG+ QSATS++PSGKALMYFGL LA+GVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 66  VSKGVRDIPGSLQSATSSMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAIC 125

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFAL+GPKNQLAHM S ERLP T+ FI +M+GT+YVSM LHSYILSV F
Sbjct: 126 FTLGCGFIIGSFFALRGPKNQLAHMSSMERLPSTLGFIATMVGTIYVSMVLHSYILSVLF 185

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLAL YY +SYFPGGS+GM+FLSSALTSS  + FGR
Sbjct: 186 SVLQVLALVYYCISYFPGGSSGMRFLSSALTSSALRVFGR 225

[Close]

BLAST of Csa7G200820 vs. TAIR10
Match: AT5G56020.1 (AT5G56020.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 252.3 bits (643), Expect = 2.2e-67
Identity = 128/160 (80.00%), Postives = 140/160 (87.50%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR+   N QSATS++PSGKALMYFGL LA+GVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 74  VSKGVRD---NLQSATSSMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAIC 133

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFAL+GP+NQLAHM S ERLP T+ FI +M+GT+YVSM LHSYILSV F
Sbjct: 134 FTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHSYILSVIF 193

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           S LQV+ALAYY +SYFPGGS+GMKFLSS LTSSV + FGR
Sbjct: 194 SALQVIALAYYCISYFPGGSSGMKFLSSTLTSSVFRMFGR 230

[Close]

BLAST of Csa7G200820 vs. TAIR10
Match: AT5G24170.1 (AT5G24170.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 1


Query: 39  FGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFS 98
           F   LATG+  +F++  +F      +P KFA+ FT G    IGS   L GP+ Q++ MF 
Sbjct: 41  FAASLATGLLLMFLSMIVFG-----IPIKFALLFTFGNVLAIGSTAFLMGPEQQMSMMFD 100

Query: 99  KERLPFTVIFIGSMLGTLYVSMGLHSYILSVFFSVLQVLALAYYAVSYFP 149
             R   T I+IG ++  L  ++ +HS IL+V   + ++ AL +Y++SY P
Sbjct: 101 PVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEICALIWYSLSYIP 145

[Close]

BLAST of Csa7G200820 vs. NCBI nr
Match: gi|700188896|gb|KGN44129.1| (hypothetical protein Csa_7G200820 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.0e-90
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 60
           MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV
Sbjct: 1   MYALAFVLEYRVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPV 60

Query: 61  MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 120
           MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM
Sbjct: 61  MVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSM 120

Query: 121 GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR
Sbjct: 121 GLHSYILSVFFSVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 171

[Close]

BLAST of Csa7G200820 vs. NCBI nr
Match: gi|449444024|ref|XP_004139775.1| (PREDICTED: protein transport protein SFT2-like [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 2.4e-84
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 130

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF
Sbjct: 131 FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 190

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 230

[Close]

BLAST of Csa7G200820 vs. NCBI nr
Match: gi|470117531|ref|XP_004294911.1| (PREDICTED: protein transport protein SFT2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 288.1 bits (736), Expect = 1.0e-74
Identity = 142/160 (88.75%), Postives = 152/160 (95.00%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR++PGN QSATS+VPSGKALMYFGLFLATGVFF+FIAFTMFLPVMVLMPQKFAIC
Sbjct: 70  VSKGVRDIPGNLQSATSSVPSGKALMYFGLFLATGVFFVFIAFTMFLPVMVLMPQKFAIC 129

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFALKGP+NQ AHM SKERLPFT+ F+GSM+GT+YVSM LHSYILSVFF
Sbjct: 130 FTLGCAFIIGSFFALKGPQNQFAHMSSKERLPFTLGFLGSMVGTIYVSMVLHSYILSVFF 189

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGS G+KFLSSALTSSV KCFGR
Sbjct: 190 SVLQVLALAYYAVSYFPGGSAGLKFLSSALTSSVMKCFGR 229

[Close]

BLAST of Csa7G200820 vs. NCBI nr
Match: gi|658038927|ref|XP_008355031.1| (PREDICTED: protein transport protein SFT2-like [Malus domestica])

HSP 1 Score: 287.0 bits (733), Expect = 2.2e-74
Identity = 142/160 (88.75%), Postives = 151/160 (94.38%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR++PG+ QSATSNVPSGKALMYFGLFLATGVFF+FIAFTMFLPVMVLMPQKFAIC
Sbjct: 70  VSKGVRDIPGSLQSATSNVPSGKALMYFGLFLATGVFFVFIAFTMFLPVMVLMPQKFAIC 129

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FII SFFALKGPKNQLAHM SKERLPFTV F+G+M+GT+YVSM LHSYILSVFF
Sbjct: 130 FTLGCAFIIASFFALKGPKNQLAHMSSKERLPFTVGFLGTMVGTIYVSMVLHSYILSVFF 189

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVLALAYYAVSYFPGGS GMKFLSSAL SSV +CFGR
Sbjct: 190 SVLQVLALAYYAVSYFPGGSAGMKFLSSALASSVMRCFGR 229

[Close]

BLAST of Csa7G200820 vs. NCBI nr
Match: gi|1009107648|ref|XP_015880762.1| (PREDICTED: protein transport protein SFT2 [Ziziphus jujuba])

HSP 1 Score: 285.4 bits (729), Expect = 6.5e-74
Identity = 142/160 (88.75%), Postives = 151/160 (94.38%), Query Frame = 1


Query: 12  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 71
           VSKGVR+LPGNFQSATS+VPSGKALMYFGL LATGVFF+FIAFTMFLPVMVLMPQKFAIC
Sbjct: 68  VSKGVRDLPGNFQSATSSVPSGKALMYFGLLLATGVFFVFIAFTMFLPVMVLMPQKFAIC 127

Query: 72  FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 131
           FTLGC FIIGSFFALKGPKNQLAHM SKERLPFT+ FIGSM+GT+YVSM LHSYILSV F
Sbjct: 128 FTLGCGFIIGSFFALKGPKNQLAHMSSKERLPFTIGFIGSMVGTIYVSMVLHSYILSVVF 187

Query: 132 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 172
           SVLQVL+LAYYA SYFPGG+ GMKFL+SALTSSV KCFGR
Sbjct: 188 SVLQVLSLAYYAFSYFPGGAAGMKFLASALTSSVMKCFGR 227

The following BLAST results are available for this feature:

BLAST of Csa7G200820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SFT2_YEAST	4.3e-17	34.88	Protein transport protein SFT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]
SFT2_SCHPO	4.9e-13	30.25	Protein transport protein sft2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
SFT2A_HUMAN	1.3e-08	31.15	Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1	[more]
SFT2A_MOUSE	1.1e-07	30.33	Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=1 SV=1	[more]
SFT2A_RAT	2.4e-07	30.33	Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1	[more]

BLAST of Csa7G200820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5A9_CUCSA	7.0e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G200820 PE=4 SV=1	[more]
A0A0D2U527_GOSRA	1.0e-73	85.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G451900 PE=4 SV=1	[more]
A0A0D2SIZ8_GOSRA	1.0e-73	85.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G451900 PE=4 SV=1	[more]
A0A059BWI4_EUCGR	2.3e-73	86.88	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03671 PE=4 SV=1	[more]
D7UAN0_VITVI	2.3e-73	85.63	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01110 PE=4 SV=...	[more]

BLAST of Csa7G200820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26550.1	2.1e-70	81.25	Got1/Sft2-like vescicle transport protein family	[more]
AT5G56020.1	2.2e-67	80.00	Got1/Sft2-like vescicle transport protein family	[more]
AT5G24170.1	1.2e-12	36.36	Got1/Sft2-like vescicle transport protein family	[more]

BLAST of Csa7G200820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188896\|gb\|KGN44129.1\|	1.0e-90	100.00	hypothetical protein Csa_7G200820 [Cucumis sativus]	[more]
gi\|449444024\|ref\|XP_004139775.1\|	2.4e-84	100.00	PREDICTED: protein transport protein SFT2-like [Cucumis sativus]	[more]
gi\|470117531\|ref\|XP_004294911.1\|	1.0e-74	88.75	PREDICTED: protein transport protein SFT2 [Fragaria vesca subsp. vesca]	[more]
gi\|658038927\|ref\|XP_008355031.1\|	2.2e-74	88.75	PREDICTED: protein transport protein SFT2-like [Malus domestica]	[more]
gi\|1009107648\|ref\|XP_015880762.1\|	6.5e-74	88.75	PREDICTED: protein transport protein SFT2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007305	Vesicle_transpt_Got1/SFT2
IPR011691	Vesicle_transpt_SFT2

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU109371	cucumber EST collection version 3.0	transcribed_cluster
CU114674	cucumber EST collection version 3.0	transcribed_cluster
CU174292	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G200820.1	Csa7G200820.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU174292	CU174292	transcribed_cluster
CU109371	CU109371	transcribed_cluster
CU114674	CU114674	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 46..158 score: 5.7
IPR011691	Vesicle transport protein, SFT2-like	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 12..171 score: 2.9E
None	No IPR available	PANTHER	PTHR23137:SF10	SUBFAMILY NOT NAMED	coord: 12..171 score: 2.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G200820	Cla003334	Watermelon (97103) v1	cuwmB569
Csa7G200820	ClCG09G021560	Watermelon (Charleston Gray)	cuwcgB527
Csa7G200820	Lsi02G018060	Bottle gourd (USVL1VR-Ls)	culsiB504
Csa7G200820	Cla97C09G182970	Watermelon (97103) v2	cuwmbB573
Csa7G200820	Bhi09G001512	Wax gourd	cuwgoB709
Csa7G200820	CSPI07G09460	Wild cucumber (PI 183967)	cpicuB354
Csa7G200820	CmaCh01G010590	Cucurbita maxima (Rimu)	cmacuB491
Csa7G200820	CmoCh01G011000	Cucurbita moschata (Rifu)	cmocuB479
Csa7G200820	Cp4.1LG06g08250	Cucurbita pepo (Zucchini)	cpecuB802
Csa7G200820	Cp4.1LG02g00350	Cucurbita pepo (Zucchini)	cpecuB593
Csa7G200820	CsGy7G009090	Cucumber (Gy14) v2	cgybcuB323
Csa7G200820	Carg23347	Silver-seed gourd	carcuB0084
Csa7G200820	Carg24740	Silver-seed gourd	carcuB0464

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G200820	Melon (DHL92) v3.6.1	cumedB513
Csa7G200820	Melon (DHL92) v3.5.1	cumeB534