Csa7G192210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G192210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 6959006 .. 6961879 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACCGAAGATACCATCGAGGAAGTGCTCTCCGGATTTTCCCAGGTTGGCAAATTCTGCAGATATTACTCATAAAAGTTTGTACAGCAAAACCTGTAAAGACAAAAACCTCTCTGTTTTCTCTATCTCTTGCTTCTCTCTACTGCTTACTGATCAAAGCATGAGAAGCTATGAACAAACAAATACAAAATAACGTTGATATTTGGTGTATTTATTGCTTATATTATCGTGAAAATTTGACTCTTTCAGTGGTGCCCAACACGCCAAGATTTTGGGGATGCTTTACGCCATTGATGTTGAAGGTTTGATTTTGGGAAGAGGGTTTTGGATTTTGGTTGATAAAACGATATGGGTTTGTTCAAAAATGTTTGTTGGCTTACACTGCACTTAATTGGGTCGTGGGTGGTTGATTCGTATGCTTAATGGATCATTCCATTTATTGGTGCTCCGATTTTTAGATTTTATATTAATATACGTAAAATATATTGTACATATTTTTTTGTTTTTAAAGGATTATTTGGCTTGGTGGCTTGGTGGCTTGGTGTCTGCTCCTTCAAAGCAAAGTATCTACACAATCCTTCGGTGGGATTTATTCGTAATTTCCTTTTGTTGATTGTTGGTGAATCAAGGAAACACATGAAATAAGAAAAGCCCACTCTGCTTTCATGGACCCCAGTCATGGCCAAGAGGTATGTAATATAATATTTTCTTTATTTTTTTCCTGAAATTATATTTATCTTCTTCCTGTCCTTTTCTGGTGGCCAATGATGGTCTTTTGACGCTCACAAAGCCTCCACAAAAGGCAACCATTTTCCTTTCTTTTAACTAACCATAGTAGAGATTCCAACCTTACATTTTTAGATGGATAGTACAGTACATATTCCATGTTAGTTCAATCATGCTCCTGAAGTCAATAACTAAAATTAGATTATCGAGGAAAGCTTTCATTTAGCATCAAAGTTCTCTTATTTTATACCTTACAGAGAACCAGGTGTTAAAGATGAGTTTTTGGTCTTATACTTTGATATAATAATTTTAGTTTTTGTATTTTTAACTTTAATTTATTTTAGTTTTTGAACTTTCAAAATATTGAGGATCTAAGGTGATCACTTTTTAAAAAATACAAAATACCAAAATAAGTATTTTAAAAGTACGATGATCAAAATGAATAAAAGTGTTAAAATTACCTGCCTATACAATTTTAAAATATTGTTAACCACAGAATGAATAAAAAAATAATTATAGTGGAATGAATAAAAAAATCATTATAGTGGTGTTTAAGTCTAAATTAAATTACTAATTGAACATCTAAAACATAAATTTAAAAGAAATGTTTGATAGTGTTAGAAGTTTTAATGTGCCTAATAAATTTTATAATTTTAAAAGATTAAGTTTTTAAACTCGATAGATGTTCGTAATTGATGTAAATATATTAAACTTAAAATTGAATGTCAGATCTTATACAACAATAAATTTAAAATTTTAAAACCATCAAATGAAATAATTATTCAACACCATTTAAAATTGAAACTTATTATTCAACTTTAATCAGAAAAGTTGGAGCTTAATTTTAAATTTTTTTTTATTTTTACTATAAACTTGGACGCTAAAAGTAAACAATTGTGACAAGCTTTTATCCTCATTTAAAGTTTTGCTAATTTGCCCACTGATTAATTTTAATAGAAAGCCATATATATAAACTTTTTAATGTACTATTTTTTTCAAGATTATGATTACAATATTCGTCTAAGCATACTATATAATTGATAAAAATGAAAGTTTAAGATTAAATTTGATGGACGTTAGATCAAAATTAGTTTTGCTTGTAGACTAATTGATTTCAATGACTTGTTTTGAGAATTAAACAGAATAGCTTTAGATTAAAGTGTGGATTTAGGTTACCTTACTTTTCTCCTTTCCACTGTGTTTTTCATAAGAAAAGGAAAGTAGATTAGGATCTCAAGGAATTCCAAGGATTTTTTTTAATAGTCCTTTTTATTTGAACTTTACAAAAAGAAGTGTCTTGGAAACTTGAGCAATTGTTAATTTAGTTTAATTAACCTTTTGACCATACTTATTATTTACCCCTCGTGAGAATGTTAAAAGTTAGAAATGAGAATACGAGAATTGAGATTCCTTTTATGTCATTTAATAGGAATCATTTGGCATTGGAATTAGATTACTGTTCCCATTGCTTATTGTTTGTATTAGGAAAGTTAAAGGAACATATAACTATAGATATGAAAACACCCATTAAAAAAAGATGGGCAGCATAACTTTTTGGAAAGAAAGAGCAATTATGCTGGGTGGAGGAGGACATGATTTGATTTTAATTGTTAGTTTATTCAATAATAATGGGTAGAGTAGAAGAGTGGATGAAAGTGTCAAGTGATTATAAAATAGCTAATTGTGAGGTCCTCCATAGAATAGGGGGAGAGAGATTAAGGAGAGTTTTGATTGAACAAGACTCTCTCTCTTTGTTTTTTTACGTTATAATTTAGCATTTTAAACAATATTACATTCAAGTAATGGAGTAGAGTTGAAACCTAGGATATAAATTACTAGTATTTCAACGAATCAAACTTCCTCCAAACAGAAAAATATTAGACGAATATGATTCTTTTGTTTATTTATTTGGGTAATCCAAATTCAAAAGCATACTTTCTTTTTCAGGAAAATGCAATATGGTGACGTAAATTGTGATTTGGAAAATTATCTAGGAAGAGTGATGGGTTTGTTTAGCTCATCCATAAAACCATAATTAAACAAAGTGTAGAGAGTGAAATTAAAGTCACCCAATGCTCTCTCCTATGCTAGCTAGGCCTCTTCATTTCTTTCTTACATCCATGCTCTTTCTTGCTTATGTCATTTT

mRNA sequence

ATGCAACCGAAGATACCATCGAGGAAGTGCTCTCCGGATTTTCCCAGTGGTGCCCAACACGCCAAGATTTTGGGGATGCTTTACGCCATTGATGTTGAAGGATTATTTGGCTTGGTGGCTTGGTGGCTTGGTGTCTGCTCCTTCAAAGCAAAGTATCTACACAATCCTTCGGTGGGATTTATTCGTAATTTCCTTTTGTTGATTGTTGGTGAATCAAGGAAACACATGAAATAA

Coding sequence (CDS)

ATGCAACCGAAGATACCATCGAGGAAGTGCTCTCCGGATTTTCCCAGTGGTGCCCAACACGCCAAGATTTTGGGGATGCTTTACGCCATTGATGTTGAAGGATTATTTGGCTTGGTGGCTTGGTGGCTTGGTGTCTGCTCCTTCAAAGCAAAGTATCTACACAATCCTTCGGTGGGATTTATTCGTAATTTCCTTTTGTTGATTGTTGGTGAATCAAGGAAACACATGAAATAA

Protein sequence

MQPKIPSRKCSPDFPSGAQHAKILGMLYAIDVEGLFGLVAWWLGVCSFKAKYLHNPSVGFIRNFLLLIVGESRKHMK*
Homology
[Close]
BLAST of Csa7G192210 vs. TrEMBL
Match: A0A0A0K596_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192210 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.9e-38
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

Query: 1  MQPKIPSRKCSPDFPSGAQHAKILGMLYAIDVEGLFGLVAWWLGVCSFKAKYLHNPSVGF 60
          MQPKIPSRKCSPDFPSGAQHAKILGMLYAIDVEGLFGLVAWWLGVCSFKAKYLHNPSVGF
Sbjct: 1  MQPKIPSRKCSPDFPSGAQHAKILGMLYAIDVEGLFGLVAWWLGVCSFKAKYLHNPSVGF 60

Query: 61 IRNFLLLIVGESRKHMK 78
          IRNFLLLIVGESRKHMK
Sbjct: 61 IRNFLLLIVGESRKHMK 77

[Close]
BLAST of Csa7G192210 vs. NCBI nr
Match: gi|700188876|gb|KGN44109.1| (hypothetical protein Csa_7G192210 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 9.9e-38
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

Query: 1  MQPKIPSRKCSPDFPSGAQHAKILGMLYAIDVEGLFGLVAWWLGVCSFKAKYLHNPSVGF 60
          MQPKIPSRKCSPDFPSGAQHAKILGMLYAIDVEGLFGLVAWWLGVCSFKAKYLHNPSVGF
Sbjct: 1  MQPKIPSRKCSPDFPSGAQHAKILGMLYAIDVEGLFGLVAWWLGVCSFKAKYLHNPSVGF 60

Query: 61 IRNFLLLIVGESRKHMK 78
          IRNFLLLIVGESRKHMK
Sbjct: 61 IRNFLLLIVGESRKHMK 77

The following BLAST results are available for this feature:
BLAST of Csa7G192210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K596_CUCSA6.9e-38100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192210 PE=4 SV=1[more]
BLAST of Csa7G192210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188876|gb|KGN44109.1|9.9e-38100.00hypothetical protein Csa_7G192210 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU146944cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G192210.1Csa7G192210.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU146944CU146944transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G192210MELO3C029016.2Melon (DHL92) v3.6.1cumedB513
Csa7G192210CSPI07G09280Wild cucumber (PI 183967)cpicuB354
Csa7G192210CmoCh09G010410Cucurbita moschata (Rifu)cmocuB033
Csa7G192210CmoCh01G010910Cucurbita moschata (Rifu)cmocuB479
Csa7G192210Carg23355Silver-seed gourdcarcuB0084
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G192210Silver-seed gourdcarcuB0464
Csa7G192210Watermelon (97103) v2cuwmbB573
Csa7G192210Wax gourdcuwgoB709
Csa7G192210Cucumber (Gy14) v1cgycuB472
Csa7G192210Cucurbita maxima (Rimu)cmacuB044
Csa7G192210Cucurbita maxima (Rimu)cmacuB491
Csa7G192210Melon (DHL92) v3.5.1cumeB534
Csa7G192210Watermelon (Charleston Gray)cuwcgB527
Csa7G192210Watermelon (97103) v1cuwmB569
Csa7G192210Cucurbita pepo (Zucchini)cpecuB593
Csa7G192210Cucurbita pepo (Zucchini)cpecuB802
Csa7G192210Bottle gourd (USVL1VR-Ls)culsiB504
Csa7G192210Cucumber (Gy14) v2cgybcuB323