CSPI07G09280 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G09280
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 7245816 .. 7246458 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCAACCGAAGATACCATCGAGGAAGTGCTCTCCGGATTTTCCCAGGTTGGCAAATTCTGCAGATATTACTCATAAAAGTTTGTACAGCAAAACCTGTAAAGACGAAAACCTCTCTGTTTTCTCTATCTCTTGCTTCTCTCTACTGCTTACTGATCAAAGCATGAGAAGCTATGAACAAACAAATACAAAATAACGTTGATATTTGGTGTATTTATTGCTTATATTATCGTGAAAATTTGACTCTTTCAGTGGTGCCCAACACGCCAAGATTTTGGGGATGCTTTACGCCATTGATGTTGAAGGTTTGATTTTGGGAAGAGGGTTTTGGATTTTGGTTGATAAAACGATATGGGTTTGTTCAAAAATGTTTGTTGGCTTACACTGCACTTAATTGGGTCGTGGGTGGTTGATTCGTATGCTTAATGGATCATTCCATTTATTGGTGCTCCGATTTTTAGATTTTATATTAATATACGTAAAATATATTGTACATATTTTTTTGTTTTTAAAGGATTATTTGGCTTGGTGGCTTGGTGTCTGCTCCTTCAAAGCAAAGTATCTACACAATCCTTCGGTGGGATTTATTCGTAATTTCCTTTTGTTGATTGTTGGTGAATCAAGGAAACACATGAAATAA

mRNA sequence

ATGGATGCAACCGAAGATACCATCGAGGAAGTGCTCTCCGGATTTTCCCAGGATTATTTGGCTTGGTGGCTTGGTGTCTGCTCCTTCAAAGCAAAGTATCTACACAATCCTTCGGTGGGATTTATTCGTAATTTCCTTTTGTTGATTGTTGGTGAATCAAGGAAACACATGAAATAA

Coding sequence (CDS)

ATGGATGCAACCGAAGATACCATCGAGGAAGTGCTCTCCGGATTTTCCCAGGATTATTTGGCTTGGTGGCTTGGTGTCTGCTCCTTCAAAGCAAAGTATCTACACAATCCTTCGGTGGGATTTATTCGTAATTTCCTTTTGTTGATTGTTGGTGAATCAAGGAAACACATGAAATAA
Homology
[Close]
BLAST of CSPI07G09280 vs. TrEMBL
Match: A0A0A0K596_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192210 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.8e-15
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1 

Query: 20 LAWWLGVCSFKAKYLHNPSVGFIRNFLLLIVGESRKHMK 59
          +AWWLGVCSFKAKYLHNPSVGFIRNFLLLIVGESRKHMK
Sbjct: 39 VAWWLGVCSFKAKYLHNPSVGFIRNFLLLIVGESRKHMK 77

[Close]
BLAST of CSPI07G09280 vs. NCBI nr
Match: gi|700188876|gb|KGN44109.1| (hypothetical protein Csa_7G192210 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 6.8e-15
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1 

Query: 20 LAWWLGVCSFKAKYLHNPSVGFIRNFLLLIVGESRKHMK 59
          +AWWLGVCSFKAKYLHNPSVGFIRNFLLLIVGESRKHMK
Sbjct: 39 VAWWLGVCSFKAKYLHNPSVGFIRNFLLLIVGESRKHMK 77

The following BLAST results are available for this feature:
BLAST of CSPI07G09280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G09280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K596_CUCSA4.8e-1597.44Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192210 PE=4 SV=1[more]
BLAST of CSPI07G09280 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G09280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188876|gb|KGN44109.1|6.8e-1597.44hypothetical protein Csa_7G192210 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G09280.1CSPI07G09280.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G09280Csa7G192210Cucumber (Chinese Long) v2cpicuB354
CSPI07G09280MELO3C029016.2Melon (DHL92) v3.6.1cpimedB527
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G09280Watermelon (97103) v2cpiwmbB599
CSPI07G09280Wax gourdcpiwgoB722
CSPI07G09280Cucumber (Gy14) v1cgycpiB498
CSPI07G09280Cucurbita maxima (Rimu)cmacpiB046
CSPI07G09280Cucurbita maxima (Rimu)cmacpiB495
CSPI07G09280Cucurbita moschata (Rifu)cmocpiB036
CSPI07G09280Cucurbita moschata (Rifu)cmocpiB485
CSPI07G09280Melon (DHL92) v3.5.1cpimeB542
CSPI07G09280Watermelon (Charleston Gray)cpiwcgB556
CSPI07G09280Watermelon (97103) v1cpiwmB588
CSPI07G09280Cucurbita pepo (Zucchini)cpecpiB594
CSPI07G09280Cucurbita pepo (Zucchini)cpecpiB802
CSPI07G09280Bottle gourd (USVL1VR-Ls)cpilsiB518
CSPI07G09280Cucumber (Gy14) v2cgybcpiB331
CSPI07G09280Silver-seed gourdcarcpiB0088
CSPI07G09280Silver-seed gourdcarcpiB0469
CSPI07G09280Cucumber (Chinese Long) v3cpicucB414