Csa7G132910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G132910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 6039397 .. 6039782 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCCTAGCCAAAGTGCCCTTGACCCACCAATCAGTAACCTGGACCCTGATCACATTGAATCAAATGTACTAGTGATAACTAGTGATGAAAGGGATAGTTTAATGCATGACGCAGCCGACATAGGCAAAGTTATCTAGCGTGTCATACCACTAACTATTACTAACCACTTGATCCAGACATAACAGAGGAAGAGGTTCTTTGCCAAACAACTATAGAGGATAAAATTCTGAACGAGGAGGGAAGTGCTGAGAAACAAGAAAAGTCAGATAAAGACGAGGCTCAAAGGGAGCATGTGGAACTTGAGATCCCTGACTTGATAGACAGTGGTTTTCGCGATGTACTTCATAACGTCATCGTGGTACCTATGAATGTCGCGTTCTAG

mRNA sequence

ATGTCGCCTAGCCAAAGTGCCCTTGACCCACCAATCAGTAACCTGGACCCTGATCACATTGAATCAAATGTACTAGTGATAACTAACATAACAGAGGAAGAGGTTCTTTGCCAAACAACTATAGAGGATAAAATTCTGAACGAGGAGGGAAGTGCTGAGAAACAAGAAAAGTCAGATAAAGACGAGGCTCAAAGGGAGCATGTGGAACTTGAGATCCCTGACTTGATAGACAGTGGTTTTCGCGATGTACTTCATAACGTCATCGTGGTACCTATGAATGTCGCGTTCTAG

Coding sequence (CDS)

ATGTCGCCTAGCCAAAGTGCCCTTGACCCACCAATCAGTAACCTGGACCCTGATCACATTGAATCAAATGTACTAGTGATAACTAACATAACAGAGGAAGAGGTTCTTTGCCAAACAACTATAGAGGATAAAATTCTGAACGAGGAGGGAAGTGCTGAGAAACAAGAAAAGTCAGATAAAGACGAGGCTCAAAGGGAGCATGTGGAACTTGAGATCCCTGACTTGATAGACAGTGGTTTTCGCGATGTACTTCATAACGTCATCGTGGTACCTATGAATGTCGCGTTCTAG

Protein sequence

MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDKDEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF*
Homology
[Close]
BLAST of Csa7G132910 vs. TrEMBL
Match: A0A0A0K3I0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G132910 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.9e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60
          MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK
Sbjct: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60

Query: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 97
          DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF
Sbjct: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96

[Close]
BLAST of Csa7G132910 vs. NCBI nr
Match: gi|700188810|gb|KGN44043.1| (hypothetical protein Csa_7G132910 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 5.5e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60
          MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK
Sbjct: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60

Query: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 97
          DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF
Sbjct: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96

The following BLAST results are available for this feature:
BLAST of Csa7G132910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3I0_CUCSA3.9e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G132910 PE=4 SV=1[more]
BLAST of Csa7G132910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188810|gb|KGN44043.1|5.5e-46100.00hypothetical protein Csa_7G132910 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G132910.1Csa7G132910.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G132910CSPI07G08440Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G132910Cucumber (Gy14) v1cgycuB354
Csa7G132910Cucurbita maxima (Rimu)cmacuB041
Csa7G132910Cucurbita maxima (Rimu)cmacuB498
Csa7G132910Cucurbita moschata (Rifu)cmocuB030
Csa7G132910Cucurbita moschata (Rifu)cmocuB488
Csa7G132910Melon (DHL92) v3.5.1cumeB537
Csa7G132910Watermelon (Charleston Gray)cuwcgB519
Csa7G132910Watermelon (97103) v1cuwmB558
Csa7G132910Cucurbita pepo (Zucchini)cpecuB586
Csa7G132910Cucurbita pepo (Zucchini)cpecuB798
Csa7G132910Cucumber (Gy14) v2cgybcuB324
Csa7G132910Melon (DHL92) v3.6.1cumedB517
Csa7G132910Silver-seed gourdcarcuB0898
Csa7G132910Watermelon (97103) v2cuwmbB563
Csa7G132910Wax gourdcuwgoB694