Csa7G111300 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCCTAATCCATTAATTAAGTTTCATAAACATTGCGGTGGTAAAAGCTTACTCTCTTCTTCCACTCTTCACAGAAACTTGACAGATGTGTTTCCCTCACCACATGGCATTTCTTTCTAATTTTTCTGCCTCTATAAATTCTAAATACTCCAATTTCCTTCAAACCCATCACAAAAAAAATCCTTTTTTTTTCACTTCCCCATTCAAATTCAATATGTTTCCGGCCAAACTTCTGGCTCTGGTCGTCGTTTTTAACCTCAACACCGCCGTCTCCGCCACCGACGACGCTGCCATGCCCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCACCTGCAGCCCACCGCCGTCTGAGCCACTGCCATTGCCACTCTCGCCGCCGCCGCCTTCGCCCTATGCAGAGCCAGAGCCACTGCCGTTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCCACCGCAAGCGACGGCGGTGAATGGTAATGTATACACACCGATTTATAATTCTTCTTCTTCGTTTTTGAGAGTTGGGTTGGGCTCTGCTCTGGCCCCTGTTTTTGGGTTGTTGGCCATTTTCTGA ATGTGTTTCCCTCACCACATGGCATTTCTTTCTAATTTTTCTGCCTCTATAAATTCTAAATACTCCAATTTCCTTCAAACCCATCACAAAAAAAATCCTTTTTTTTTCACTTCCCCATTCAAATTCAATATGTTTCCGGCCAAACTTCTGGCTCTGGTCGTCGTTTTTAACCTCAACACCGCCGTCTCCGCCACCGACGACGCTGCCATGCCCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCACCTGCAGCCCACCGCCGTCTGAGCCACTGCCATTGCCACTCTCGCCGCCGCCGCCTTCGCCCTATGCAGAGCCAGAGCCACTGCCGTTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCCACCGCAAGCGACGGCGGTGAATGGTAATGTATACACACCGATTTATAATTCTTCTTCTTCGTTTTTGAGAGTTGGGTTGGGCTCTGCTCTGGCCCCTGTTTTTGGGTTGTTGGCCATTTTCTGA ATGTGTTTCCCTCACCACATGGCATTTCTTTCTAATTTTTCTGCCTCTATAAATTCTAAATACTCCAATTTCCTTCAAACCCATCACAAAAAAAATCCTTTTTTTTTCACTTCCCCATTCAAATTCAATATGTTTCCGGCCAAACTTCTGGCTCTGGTCGTCGTTTTTAACCTCAACACCGCCGTCTCCGCCACCGACGACGCTGCCATGCCCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCACCTGCAGCCCACCGCCGTCTGAGCCACTGCCATTGCCACTCTCGCCGCCGCCGCCTTCGCCCTATGCAGAGCCAGAGCCACTGCCGTTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCCACCGCAAGCGACGGCGGTGAATGGTAATGTATACACACCGATTTATAATTCTTCTTCTTCGTTTTTGAGAGTTGGGTTGGGCTCTGCTCTGGCCCCTGTTTTTGGGTTGTTGGCCATTTTCTGA MCFPHHMAFLSNFSASINSKYSNFLQTHHKKNPFFFTSPFKFNMFPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPSPYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYNSSSSFLRVGLGSALAPVFGLLAIF*
BLAST of Csa7G111300 vs. Swiss-Prot
Match: LECT_SOLTU (Chitin-binding lectin 1 OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 5.5e-07 Identity = 31/66 (46.97%), Postives = 31/66 (46.97%), Query Frame = 1
BLAST of Csa7G111300 vs. Swiss-Prot
Match: PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.0e-06 Identity = 27/62 (43.55%), Postives = 29/62 (46.77%), Query Frame = 1
HSP 2 Score: 36.6 bits (83), Expect = 3.4e-01 Identity = 25/65 (38.46%), Postives = 28/65 (43.08%), Query Frame = 1
BLAST of Csa7G111300 vs. TrEMBL
Match: A0A0A0K536_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G111300 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 8.3e-103 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1
BLAST of Csa7G111300 vs. TrEMBL
Match: A5VB72_SPHWW (Filamentous haemagglutinin family outer membrane protein OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=Swit_3191 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.7e-08 Identity = 45/107 (42.06%), Postives = 51/107 (47.66%), Query Frame = 1
BLAST of Csa7G111300 vs. TrEMBL
Match: A0A085MIQ2_9BILA (Uncharacterized protein OS=Trichuris suis GN=M513_01983 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.2e-06 Identity = 29/52 (55.77%), Postives = 31/52 (59.62%), Query Frame = 1
BLAST of Csa7G111300 vs. TrEMBL
Match: A0A085MIQ2_9BILA (Uncharacterized protein OS=Trichuris suis GN=M513_01983 PE=4 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 8.2e-02 Identity = 26/64 (40.62%), Postives = 30/64 (46.88%), Query Frame = 1
HSP 2 Score: 59.7 bits (143), Expect = 4.2e-06 Identity = 29/52 (55.77%), Postives = 31/52 (59.62%), Query Frame = 1
BLAST of Csa7G111300 vs. TrEMBL
Match: A0A085NJH3_9BILA (Uncharacterized protein OS=Trichuris suis GN=M514_01983 PE=4 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 8.2e-02 Identity = 26/64 (40.62%), Postives = 30/64 (46.88%), Query Frame = 1
HSP 2 Score: 59.3 bits (142), Expect = 5.5e-06 Identity = 34/77 (44.16%), Postives = 41/77 (53.25%), Query Frame = 1
BLAST of Csa7G111300 vs. TAIR10
Match: AT5G11990.1 (AT5G11990.1 proline-rich family protein) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10 Identity = 42/127 (33.07%), Postives = 59/127 (46.46%), Query Frame = 1
BLAST of Csa7G111300 vs. TAIR10
Match: AT1G68690.1 (AT1G68690.1 Protein kinase superfamily protein) HSP 1 Score: 52.4 bits (124), Expect = 3.4e-07 Identity = 27/62 (43.55%), Postives = 29/62 (46.77%), Query Frame = 1
HSP 2 Score: 36.6 bits (83), Expect = 1.9e-02 Identity = 25/65 (38.46%), Postives = 28/65 (43.08%), Query Frame = 1
BLAST of Csa7G111300 vs. TAIR10
Match: AT4G13340.1 (AT4G13340.1 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06 Identity = 30/69 (43.48%), Postives = 32/69 (46.38%), Query Frame = 1
BLAST of Csa7G111300 vs. TAIR10
Match: AT5G23150.1 (AT5G23150.1 Tudor/PWWP/MBT domain-containing protein) HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06 Identity = 28/52 (53.85%), Postives = 28/52 (53.85%), Query Frame = 1
HSP 2 Score: 37.4 bits (85), Expect = 1.1e-02 Identity = 20/54 (37.04%), Postives = 20/54 (37.04%), Query Frame = 1
BLAST of Csa7G111300 vs. TAIR10
Match: AT3G22800.1 (AT3G22800.1 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 47.8 bits (112), Expect = 8.4e-06 Identity = 26/58 (44.83%), Postives = 26/58 (44.83%), Query Frame = 1
BLAST of Csa7G111300 vs. NCBI nr
Match: gi|700188791|gb|KGN44024.1| (hypothetical protein Csa_7G111300 [Cucumis sativus]) HSP 1 Score: 380.9 bits (977), Expect = 1.2e-102 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1
BLAST of Csa7G111300 vs. NCBI nr
Match: gi|778730220|ref|XP_011659730.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus]) HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1
BLAST of Csa7G111300 vs. NCBI nr
Match: gi|659126164|ref|XP_008463043.1| (PREDICTED: mulatexin-like [Cucumis melo]) HSP 1 Score: 256.5 bits (654), Expect = 3.4e-65 Identity = 124/137 (90.51%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of Csa7G111300 vs. NCBI nr
Match: gi|703069226|ref|XP_010088446.1| (hypothetical protein L484_018218 [Morus notabilis]) HSP 1 Score: 79.7 bits (195), Expect = 5.7e-12 Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 1
BLAST of Csa7G111300 vs. NCBI nr
Match: gi|685269686|ref|XP_009125842.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Brassica rapa]) HSP 1 Score: 70.9 bits (172), Expect = 2.6e-09 Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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