Csa7G044960 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G044960
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGeranylgeranyl transferase type II beta subunit, putative; contains IPR008930 (Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid), IPR026873 (Geranylgeranyl transferase type-2 subunit beta)
LocationChr7 : 2658509 .. 2659063 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCTGCTAGTGAAAGTTGGTAATTAAGTCGAGTGTTAACTATATATAAAATTTATGTCAGACTTAATCTTGTGGTAGATATTGTTGGTTTGCAAAATGAAGACGGTTCCTTCTCAAGAGACGTTTGGGGTGAAGTAGATTCAAGGTAGTCTACTCATTTGTTTGTTTGTTTCTATTATTATTTTGGATTTTCATGCTTCATGTGATCGATCCTACAGGCCTGAAAAAAATTTAGAAGCTGAAAATGTTTATCTCGCAGGTTTTCTTATATTGCAATATCTCGTCTATCATTATTACATCAACTGGAGAAAATTAATGTAGAAAAGGCTGTCAACTACATGTTAGCTGCAAAAAATATGGATGGTGGATTTGGATGCACTCCTGCCGGAGGATCTCGTTCTGGACAAAGTATTTTCGACATACCTTCAAATATTGTGTACATTACCTTAAAAATTGATTTTAAGTTCTGCTGTGACTTCAGTTTTCTGTTGTGTTGGTGCCCTTGCTATAATGGGTTCTCTACACCATATTGACAAGGATCTCCTTGGCTAG

mRNA sequence

ATGCACCTGCTAGTGAAAGTTGATATTGTTGGTTTGCAAAATGAAGACGGTTCCTTCTCAAGAGACGTTTGGGGTGAAGTAGATTCAAGGTTTTCTTATATTGCAATATCTCGTCTATCATTATTACATCAACTGGAGAAAATTAATGTAGAAAAGGCTGTCAACTACATGTTAGCTGCAAAAAATATGGATGGTGGATTTGGATGCACTCCTGCCGGAGGATCTCGTTCTGGACAAATTTTCTGTTGTGTTGGTGCCCTTGCTATAATGGGTTCTCTACACCATATTGACAAGGATCTCCTTGGCTAG

Coding sequence (CDS)

ATGCACCTGCTAGTGAAAGTTGATATTGTTGGTTTGCAAAATGAAGACGGTTCCTTCTCAAGAGACGTTTGGGGTGAAGTAGATTCAAGGTTTTCTTATATTGCAATATCTCGTCTATCATTATTACATCAACTGGAGAAAATTAATGTAGAAAAGGCTGTCAACTACATGTTAGCTGCAAAAAATATGGATGGTGGATTTGGATGCACTCCTGCCGGAGGATCTCGTTCTGGACAAATTTTCTGTTGTGTTGGTGCCCTTGCTATAATGGGTTCTCTACACCATATTGACAAGGATCTCCTTGGCTAG

Protein sequence

MHLLVKVDIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFGCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG*
Homology
[Close]
BLAST of Csa7G044960 vs. Swiss-Prot
Match: PGTB1_ARATH (Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana GN=RGTB1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.0e-34
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +  LQNEDGSFS D+WGE+D+RFSYIAI  LS+L  L+KINVEKAV Y+++ KN+DGGFG
Sbjct: 117 VAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFG 176

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP   S +GQIFCCVGALAI GSLHH+DKD LG
Sbjct: 177 CTPGAESHAGQIFCCVGALAITGSLHHVDKDSLG 210

[Close]
BLAST of Csa7G044960 vs. Swiss-Prot
Match: PGTB2_ARATH (Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana GN=RGTB2 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.0e-34
Identity = 67/94 (71.28%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           I GLQNEDGSFS D+WGEVD+RFSYIAI  LS+L  L+KINV+KAV+Y+++ KN+DGGFG
Sbjct: 112 IAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFG 171

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           C+P   S +GQIFCCVGALAI G+LH +DKDLLG
Sbjct: 172 CSPGAESHAGQIFCCVGALAITGNLHRVDKDLLG 205

[Close]
BLAST of Csa7G044960 vs. Swiss-Prot
Match: PGTB2_HUMAN (Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 4.7e-27
Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           + GLQ EDGSF+ D+WGE+D+RFS+ A++ L+LL +L+ INVEKA+ ++L+  N DGGFG
Sbjct: 123 VKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFG 182

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           C P   S +GQI+CC G LAI   LH ++ DLLG
Sbjct: 183 CRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLG 216

[Close]
BLAST of Csa7G044960 vs. Swiss-Prot
Match: PGTB2_BOVIN (Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-26
Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +  LQ EDGSF+ D+WGE+D+RFS+ A++ L+LL +L+ INVEKA+ ++L+  N DGGFG
Sbjct: 123 VQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFG 182

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           C P   S +GQI+CC G LAI   LH ++ DLLG
Sbjct: 183 CRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLG 216

[Close]
BLAST of Csa7G044960 vs. Swiss-Prot
Match: PGTB2_MOUSE (Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=1 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-26
Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +  LQ EDGSF+ D+WGE+D+RFS+ A++ L+LL +L+ INVEKA+ ++L+  N DGGFG
Sbjct: 131 VQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFG 190

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           C P   S +GQI+CC G LAI   LH ++ DLLG
Sbjct: 191 CRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLG 224

[Close]
BLAST of Csa7G044960 vs. TrEMBL
Match: A0A0A0K6X1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044960 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.2e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MHLLVKVDIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAA 60
           MHLLVKVDIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAA
Sbjct: 1   MHLLVKVDIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAA 60

Query: 61  KNMDGGFGCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           KNMDGGFGCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG
Sbjct: 61  KNMDGGFGCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 102

[Close]
BLAST of Csa7G044960 vs. TrEMBL
Match: A0A0A0K723_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433280 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-38
Identity = 77/94 (81.91%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +VGLQNEDGSFS D+WGEVDSRFSYIAI  LSLLHQL+KINVEKAVN++++ KNMDGGFG
Sbjct: 109 VVGLQNEDGSFSGDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFG 168

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP G S SGQIFCCVGALA+ GSLHH+DKDLLG
Sbjct: 169 CTPGGESHSGQIFCCVGALALTGSLHHVDKDLLG 202

[Close]
BLAST of Csa7G044960 vs. TrEMBL
Match: B9T610_RICCO (Geranylgeranyl transferase type II beta subunit, putative OS=Ricinus communis GN=RCOM_0160830 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-37
Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 1 

Query: 8   DIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGF 67
           DI+GLQNEDGSFS D+WGEVD+RFSYIAI  LSLLH L+KIN+EKAVNY+L+ KN+DGGF
Sbjct: 69  DIIGLQNEDGSFSGDIWGEVDTRFSYIAICCLSLLHCLDKINIEKAVNYILSCKNVDGGF 128

Query: 68  GCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           GC+P G S +GQIFCCVGALAI GSLHH+DKDLLG
Sbjct: 129 GCSPGGESHAGQIFCCVGALAITGSLHHVDKDLLG 163

[Close]
BLAST of Csa7G044960 vs. TrEMBL
Match: A0A0J8BNU6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g211450 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-37
Identity = 74/94 (78.72%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +VG+QNEDGSFS D+WGEVD+RFSYIA+  LSLLHQL+KI+VEKAVNY++  KN+DGGFG
Sbjct: 109 VVGMQNEDGSFSGDMWGEVDTRFSYIAVCCLSLLHQLDKIDVEKAVNYIVRCKNLDGGFG 168

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP G S +GQIFCCVGALAIMGSLHH+DKDLLG
Sbjct: 169 CTPGGESHAGQIFCCVGALAIMGSLHHVDKDLLG 202

[Close]
BLAST of Csa7G044960 vs. TrEMBL
Match: A0A0K9R3A8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_111490 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.5e-37
Identity = 75/94 (79.79%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +VGLQNEDGSFS D+WGEVD+RFSYIAI  LSLLHQL+KI+VEKAVNY++  KN+DGGFG
Sbjct: 109 VVGLQNEDGSFSGDMWGEVDTRFSYIAICCLSLLHQLDKIDVEKAVNYIVRCKNLDGGFG 168

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP G S +GQIFCCVGALAI GSLHH+DKDLLG
Sbjct: 169 CTPGGESHAGQIFCCVGALAITGSLHHVDKDLLG 202

[Close]
BLAST of Csa7G044960 vs. TAIR10
Match: AT3G12070.1 (AT3G12070.1 RAB geranylgeranyl transferase beta subunit 2)

HSP 1 Score: 145.6 bits (366), Expect = 1.7e-35
Identity = 67/94 (71.28%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           I GLQNEDGSFS D+WGEVD+RFSYIAI  LS+L  L+KINV+KAV+Y+++ KN+DGGFG
Sbjct: 112 IAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFG 171

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           C+P   S +GQIFCCVGALAI G+LH +DKDLLG
Sbjct: 172 CSPGAESHAGQIFCCVGALAITGNLHRVDKDLLG 205

[Close]
BLAST of Csa7G044960 vs. TAIR10
Match: AT5G12210.1 (AT5G12210.1 RAB geranylgeranyl transferase beta subunit 1)

HSP 1 Score: 145.6 bits (366), Expect = 1.7e-35
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +  LQNEDGSFS D+WGE+D+RFSYIAI  LS+L  L+KINVEKAV Y+++ KN+DGGFG
Sbjct: 117 VAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFG 176

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP   S +GQIFCCVGALAI GSLHH+DKD LG
Sbjct: 177 CTPGAESHAGQIFCCVGALAITGSLHHVDKDSLG 210

[Close]
BLAST of Csa7G044960 vs. NCBI nr
Match: gi|700188323|gb|KGN43556.1| (hypothetical protein Csa_7G044960 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MHLLVKVDIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAA 60
           MHLLVKVDIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAA
Sbjct: 1   MHLLVKVDIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAA 60

Query: 61  KNMDGGFGCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           KNMDGGFGCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG
Sbjct: 61  KNMDGGFGCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 102

[Close]
BLAST of Csa7G044960 vs. NCBI nr
Match: gi|778729139|ref|XP_011659536.1| (PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-38
Identity = 77/94 (81.91%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +VGLQNEDGSFS D+WGEVDSRFSYIAI  LSLLHQL+KINVEKAVN++++ KNMDGGFG
Sbjct: 109 VVGLQNEDGSFSGDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFG 168

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP G S SGQIFCCVGALA+ GSLHH+DKDLLG
Sbjct: 169 CTPGGESHSGQIFCCVGALALTGSLHHVDKDLLG 202

[Close]
BLAST of Csa7G044960 vs. NCBI nr
Match: gi|659122320|ref|XP_008461078.1| (PREDICTED: geranylgeranyl transferase type-2 subunit beta [Cucumis melo])

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-38
Identity = 77/94 (81.91%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +VGLQNEDGSFS D+WGEVDSRFSYIAI  LSLLHQL+KINVEKAVN++++ KNMDGGFG
Sbjct: 109 VVGLQNEDGSFSGDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFG 168

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP G S SGQIFCCVGALA+ GSLHH+DKDLLG
Sbjct: 169 CTPGGESHSGQIFCCVGALALTGSLHHVDKDLLG 202

[Close]
BLAST of Csa7G044960 vs. NCBI nr
Match: gi|223526430|gb|EEF28709.1| (geranylgeranyl transferase type II beta subunit, putative [Ricinus communis])

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-37
Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 1 

Query: 8   DIVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGF 67
           DI+GLQNEDGSFS D+WGEVD+RFSYIAI  LSLLH L+KIN+EKAVNY+L+ KN+DGGF
Sbjct: 69  DIIGLQNEDGSFSGDIWGEVDTRFSYIAICCLSLLHCLDKINIEKAVNYILSCKNVDGGF 128

Query: 68  GCTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           GC+P G S +GQIFCCVGALAI GSLHH+DKDLLG
Sbjct: 129 GCSPGGESHAGQIFCCVGALAITGSLHHVDKDLLG 163

[Close]
BLAST of Csa7G044960 vs. NCBI nr
Match: gi|731357176|ref|XP_010690068.1| (PREDICTED: geranylgeranyl transferase type-2 subunit beta-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-37
Identity = 74/94 (78.72%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 9   IVGLQNEDGSFSRDVWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYMLAAKNMDGGFG 68
           +VG+QNEDGSFS D+WGEVD+RFSYIA+  LSLLHQL+KI+VEKAVNY++  KN+DGGFG
Sbjct: 109 VVGMQNEDGSFSGDMWGEVDTRFSYIAVCCLSLLHQLDKIDVEKAVNYIVRCKNLDGGFG 168

Query: 69  CTPAGGSRSGQIFCCVGALAIMGSLHHIDKDLLG 103
           CTP G S +GQIFCCVGALAIMGSLHH+DKDLLG
Sbjct: 169 CTPGGESHAGQIFCCVGALAIMGSLHHVDKDLLG 202

The following BLAST results are available for this feature:
BLAST of Csa7G044960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGTB1_ARATH3.0e-3471.28Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana GN=RGTB... [more]
PGTB2_ARATH3.0e-3471.28Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana GN=RGTB... [more]
PGTB2_HUMAN4.7e-2755.32Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 S... [more]
PGTB2_BOVIN2.3e-2654.26Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=... [more]
PGTB2_MOUSE2.3e-2654.26Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=1 S... [more]
BLAST of Csa7G044960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6X1_CUCSA3.2e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044960 PE=4 SV=1[more]
A0A0A0K723_CUCSA1.8e-3881.91Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433280 PE=4 SV=1[more]
B9T610_RICCO1.2e-3778.95Geranylgeranyl transferase type II beta subunit, putative OS=Ricinus communis GN... [more]
A0A0J8BNU6_BETVU1.6e-3778.72Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g211450 PE=4 S... [more]
A0A0K9R3A8_SPIOL3.5e-3779.79Uncharacterized protein OS=Spinacia oleracea GN=SOVF_111490 PE=4 SV=1[more]
BLAST of Csa7G044960 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12070.11.7e-3571.28 RAB geranylgeranyl transferase beta subunit 2[more]
AT5G12210.11.7e-3571.28 RAB geranylgeranyl transferase beta subunit 1[more]
BLAST of Csa7G044960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188323|gb|KGN43556.1|4.6e-51100.00hypothetical protein Csa_7G044960 [Cucumis sativus][more]
gi|778729139|ref|XP_011659536.1|2.6e-3881.91PREDICTED: geranylgeranyl transferase type-2 subunit beta-like [Cucumis sativus][more]
gi|659122320|ref|XP_008461078.1|2.6e-3881.91PREDICTED: geranylgeranyl transferase type-2 subunit beta [Cucumis melo][more]
gi|223526430|gb|EEF28709.1|1.7e-3778.95geranylgeranyl transferase type II beta subunit, putative [Ricinus communis][more]
gi|731357176|ref|XP_010690068.1|2.2e-3778.72PREDICTED: geranylgeranyl transferase type-2 subunit beta-like isoform X1 [Beta ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001330PFTB_repeat
IPR008930Terpenoid_cyclase/PrenylTrfase
IPR026873Ptb1
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004663Rab geranylgeranyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0018344protein geranylgeranylation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018344 protein geranylgeranylation
biological_process GO:0018342 protein prenylation
cellular_component GO:0005968 Rab-protein geranylgeranyltransferase complex
molecular_function GO:0004663 Rab geranylgeranyltransferase activity
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G044960.1Csa7G044960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001330PFTB repeatPFAMPF00432Prenyltranscoord: 11..42
score: 2.2E-5coord: 48..91
score: 2.
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidGENE3DG3DSA:1.50.10.20coord: 11..101
score: 3.7
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidunknownSSF48239Terpenoid cyclases/Protein prenyltransferasescoord: 9..99
score: 2.36
IPR026873Geranylgeranyl transferase type-2 subunit betaPANTHERPTHR11774:SF11GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETAcoord: 9..102
score: 9.8
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 9..102
score: 9.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G044960MELO3C018787Melon (DHL92) v3.5.1cumeB530
Csa7G044960MELO3C018787.2Melon (DHL92) v3.6.1cumedB509
Csa7G044960Bhi05G001139Wax gourdcuwgoB670
Csa7G044960Cucsa.148200Cucumber (Gy14) v1cgycuB215
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G044960Watermelon (97103) v1cuwmB581
Csa7G044960Watermelon (97103) v1cuwmB593
Csa7G044960Watermelon (97103) v1cuwmB596
Csa7G044960Cucurbita pepo (Zucchini)cpecuB257
Csa7G044960Cucurbita pepo (Zucchini)cpecuB298
Csa7G044960Cucurbita pepo (Zucchini)cpecuB526
Csa7G044960Cucurbita pepo (Zucchini)cpecuB690
Csa7G044960Cucurbita pepo (Zucchini)cpecuB765
Csa7G044960Bottle gourd (USVL1VR-Ls)culsiB494
Csa7G044960Bottle gourd (USVL1VR-Ls)culsiB502
Csa7G044960Bottle gourd (USVL1VR-Ls)culsiB507
Csa7G044960Cucumber (Gy14) v2cgybcuB289
Csa7G044960Cucumber (Gy14) v2cgybcuB324
Csa7G044960Melon (DHL92) v3.6.1cumedB498
Csa7G044960Melon (DHL92) v3.6.1cumedB541
Csa7G044960Silver-seed gourdcarcuB0032
Csa7G044960Silver-seed gourdcarcuB0664
Csa7G044960Silver-seed gourdcarcuB0739
Csa7G044960Silver-seed gourdcarcuB0891
Csa7G044960Watermelon (97103) v2cuwmbB514
Csa7G044960Watermelon (97103) v2cuwmbB529
Csa7G044960Watermelon (97103) v2cuwmbB536
Csa7G044960Wax gourdcuwgoB687
Csa7G044960Cucumber (Chinese Long) v2cucuB044
Csa7G044960Cucumber (Gy14) v1cgycuB028
Csa7G044960Cucurbita maxima (Rimu)cmacuB147
Csa7G044960Cucurbita maxima (Rimu)cmacuB231
Csa7G044960Cucurbita maxima (Rimu)cmacuB527
Csa7G044960Cucurbita maxima (Rimu)cmacuB569
Csa7G044960Cucurbita maxima (Rimu)cmacuB643
Csa7G044960Cucurbita moschata (Rifu)cmocuB132
Csa7G044960Cucurbita moschata (Rifu)cmocuB218
Csa7G044960Cucurbita moschata (Rifu)cmocuB518
Csa7G044960Cucurbita moschata (Rifu)cmocuB562
Csa7G044960Cucurbita moschata (Rifu)cmocuB632
Csa7G044960Melon (DHL92) v3.5.1cumeB518
Csa7G044960Melon (DHL92) v3.5.1cumeB564
Csa7G044960Watermelon (Charleston Gray)cuwcgB537
Csa7G044960Watermelon (Charleston Gray)cuwcgB546
Csa7G044960Watermelon (Charleston Gray)cuwcgB553