Csa7G043620 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G043620
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 2444036 .. 2444278 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGGGTAAAGTTAAGAGCCACCAAGAGGGACGAGGGAAGTGTTCCTCTACCTTGAGGTGCACTCTGTTCCTCCTCCAATTTCAAAACGACCCTTCGTTTTGA

mRNA sequence

ATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGGGTAAAGTTAAGAGCCACCAAGAGGGACGAGGGAAGTGTTCCTCTACCTTGAGGTGCACTCTGTTCCTCCTCCAATTTCAAAACGACCCTTCGTTTTGA

Coding sequence (CDS)

ATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGGGTAAAGTTAAGAGCCACCAAGAGGGACGAGGGAAGTGTTCCTCTACCTTGAGGTGCACTCTGTTCCTCCTCCAATTTCAAAACGACCCTTCGTTTTGA

Protein sequence

MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGKCSSTLRCTLFLLQFQNDPSF*
Homology
[Close]
BLAST of Csa7G043620 vs. TrEMBL
Match: A0A0A0K1L4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043620 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.0e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGK 60
          MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGK
Sbjct: 1  MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGK 60

Query: 61 CSSTLRCTLFLLQFQNDPSF 81
          CSSTLRCTLFLLQFQNDPSF
Sbjct: 61 CSSTLRCTLFLLQFQNDPSF 80

[Close]
BLAST of Csa7G043620 vs. NCBI nr
Match: gi|700188287|gb|KGN43520.1| (hypothetical protein Csa_7G043620 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 7.1e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGK 60
          MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGK
Sbjct: 1  MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGK 60

Query: 61 CSSTLRCTLFLLQFQNDPSF 81
          CSSTLRCTLFLLQFQNDPSF
Sbjct: 61 CSSTLRCTLFLLQFQNDPSF 80

The following BLAST results are available for this feature:
BLAST of Csa7G043620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1L4_CUCSA5.0e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043620 PE=4 SV=1[more]
BLAST of Csa7G043620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188287|gb|KGN43520.1|7.1e-39100.00hypothetical protein Csa_7G043620 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G043620.1Csa7G043620.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G043620CSPI07G03720Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G043620Melon (DHL92) v3.6.1cumedB497
Csa7G043620Melon (DHL92) v3.6.1cumedB509
Csa7G043620Melon (DHL92) v3.6.1cumedB541
Csa7G043620Silver-seed gourdcarcuB0032
Csa7G043620Silver-seed gourdcarcuB0375
Csa7G043620Silver-seed gourdcarcuB0664
Csa7G043620Silver-seed gourdcarcuB0739
Csa7G043620Silver-seed gourdcarcuB0891
Csa7G043620Watermelon (97103) v2cuwmbB514
Csa7G043620Watermelon (97103) v2cuwmbB529
Csa7G043620Watermelon (97103) v2cuwmbB532
Csa7G043620Wax gourdcuwgoB670
Csa7G043620Wax gourdcuwgoB679
Csa7G043620Wax gourdcuwgoB687
Csa7G043620Cucumber (Chinese Long) v2cucuB170
Csa7G043620Cucumber (Chinese Long) v2cucuB078
Csa7G043620Cucumber (Gy14) v1cgycuB028
Csa7G043620Cucumber (Gy14) v1cgycuB068
Csa7G043620Cucumber (Gy14) v1cgycuB215
Csa7G043620Cucurbita maxima (Rimu)cmacuB147
Csa7G043620Cucurbita maxima (Rimu)cmacuB231
Csa7G043620Cucurbita maxima (Rimu)cmacuB527
Csa7G043620Cucurbita maxima (Rimu)cmacuB569
Csa7G043620Cucurbita maxima (Rimu)cmacuB643
Csa7G043620Cucurbita moschata (Rifu)cmocuB132
Csa7G043620Cucurbita moschata (Rifu)cmocuB518
Csa7G043620Cucurbita moschata (Rifu)cmocuB562
Csa7G043620Cucurbita moschata (Rifu)cmocuB632
Csa7G043620Melon (DHL92) v3.5.1cumeB516
Csa7G043620Melon (DHL92) v3.5.1cumeB530
Csa7G043620Melon (DHL92) v3.5.1cumeB564
Csa7G043620Watermelon (Charleston Gray)cuwcgB537
Csa7G043620Watermelon (Charleston Gray)cuwcgB546
Csa7G043620Watermelon (Charleston Gray)cuwcgB549
Csa7G043620Watermelon (Charleston Gray)cuwcgB553
Csa7G043620Watermelon (97103) v1cuwmB593
Csa7G043620Watermelon (97103) v1cuwmB596
Csa7G043620Watermelon (97103) v1cuwmB597
Csa7G043620Cucurbita pepo (Zucchini)cpecuB257
Csa7G043620Cucurbita pepo (Zucchini)cpecuB298
Csa7G043620Cucurbita pepo (Zucchini)cpecuB526
Csa7G043620Cucurbita pepo (Zucchini)cpecuB690
Csa7G043620Cucurbita pepo (Zucchini)cpecuB765
Csa7G043620Bottle gourd (USVL1VR-Ls)culsiB488
Csa7G043620Bottle gourd (USVL1VR-Ls)culsiB494
Csa7G043620Bottle gourd (USVL1VR-Ls)culsiB502
Csa7G043620Cucumber (Gy14) v2cgybcuB085
Csa7G043620Cucumber (Gy14) v2cgybcuB289
Csa7G043620Cucumber (Gy14) v2cgybcuB324