CSPI07G03720 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G03720
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 2932193 .. 2932408 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGGGTAAAGTTAAGAGCCACCAAGAGGGACGAGGGAAGTGTTCCTCTACCTTGAGGTGCACTCTGTTCCTCCTCCAATTTCAAAACGACCCTTCGTTTTGA

mRNA sequence

ATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGGGTAAAGTTAAGAGCCACCAAGAGGGACGAGGGAAGTGTTCCTCTACCTTGAGGTGCACTCTGTTCCTCCTCCAATTTCAAAACGACCCTTCGTTTTGA

Coding sequence (CDS)

ATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGGGTAAAGTTAAGAGCCACCAAGAGGGACGAGGGAAGTGTTCCTCTACCTTGAGGTGCACTCTGTTCCTCCTCCAATTTCAAAACGACCCTTCGTTTTGA
Homology
[Close]
BLAST of CSPI07G03720 vs. TrEMBL
Match: A0A0A0K1L4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043620 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.9e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGKCSSTLRCTL 60
          MEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGKCSSTLRCTL
Sbjct: 10 MEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGKCSSTLRCTL 69

Query: 61 FLLQFQNDPSF 72
          FLLQFQNDPSF
Sbjct: 70 FLLQFQNDPSF 80

[Close]
BLAST of CSPI07G03720 vs. NCBI nr
Match: gi|700188287|gb|KGN43520.1| (hypothetical protein Csa_7G043620 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 5.6e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGKCSSTLRCTL 60
          MEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGKCSSTLRCTL
Sbjct: 10 MEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAGKVKSHQEGRGKCSSTLRCTL 69

Query: 61 FLLQFQNDPSF 72
          FLLQFQNDPSF
Sbjct: 70 FLLQFQNDPSF 80

The following BLAST results are available for this feature:
BLAST of CSPI07G03720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G03720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1L4_CUCSA3.9e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G043620 PE=4 SV=1[more]
BLAST of CSPI07G03720 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G03720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188287|gb|KGN43520.1|5.6e-35100.00hypothetical protein Csa_7G043620 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G03720.1CSPI07G03720.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G03720Csa7G043620Cucumber (Chinese Long) v2cpicuB354
CSPI07G03720CsaV3_7G003600Cucumber (Chinese Long) v3cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G03720Cucurbita moschata (Rifu)cmocpiB131
CSPI07G03720Cucurbita moschata (Rifu)cmocpiB524
CSPI07G03720Cucurbita moschata (Rifu)cmocpiB568
CSPI07G03720Cucurbita moschata (Rifu)cmocpiB643
CSPI07G03720Cucumber (Chinese Long) v2cpicuB326
CSPI07G03720Melon (DHL92) v3.5.1cpimeB538
CSPI07G03720Melon (DHL92) v3.5.1cpimeB520
CSPI07G03720Melon (DHL92) v3.5.1cpimeB575
CSPI07G03720Watermelon (Charleston Gray)cpiwcgB566
CSPI07G03720Watermelon (Charleston Gray)cpiwcgB574
CSPI07G03720Watermelon (Charleston Gray)cpiwcgB578
CSPI07G03720Watermelon (Charleston Gray)cpiwcgB583
CSPI07G03720Watermelon (97103) v1cpiwmB600
CSPI07G03720Watermelon (97103) v1cpiwmB612
CSPI07G03720Watermelon (97103) v1cpiwmB614
CSPI07G03720Watermelon (97103) v1cpiwmB617
CSPI07G03720Cucurbita pepo (Zucchini)cpecpiB257
CSPI07G03720Cucurbita pepo (Zucchini)cpecpiB301
CSPI07G03720Cucurbita pepo (Zucchini)cpecpiB692
CSPI07G03720Cucurbita pepo (Zucchini)cpecpiB768
CSPI07G03720Bottle gourd (USVL1VR-Ls)cpilsiB499
CSPI07G03720Bottle gourd (USVL1VR-Ls)cpilsiB505
CSPI07G03720Bottle gourd (USVL1VR-Ls)cpilsiB516
CSPI07G03720Melon (DHL92) v3.6.1cpimedB507
CSPI07G03720Melon (DHL92) v3.6.1cpimedB523
CSPI07G03720Melon (DHL92) v3.6.1cpimedB560
CSPI07G03720Cucumber (Gy14) v2cgybcpiB087
CSPI07G03720Cucumber (Gy14) v2cgybcpiB295
CSPI07G03720Cucumber (Gy14) v2cgybcpiB332
CSPI07G03720Silver-seed gourdcarcpiB0034
CSPI07G03720Silver-seed gourdcarcpiB0378
CSPI07G03720Silver-seed gourdcarcpiB0673
CSPI07G03720Silver-seed gourdcarcpiB0755
CSPI07G03720Silver-seed gourdcarcpiB0911
CSPI07G03720Cucumber (Chinese Long) v3cpicucB385
CSPI07G03720Cucumber (Chinese Long) v3cpicucB409
CSPI07G03720Watermelon (97103) v2cpiwmbB553
CSPI07G03720Watermelon (97103) v2cpiwmbB539
CSPI07G03720Watermelon (97103) v2cpiwmbB556
CSPI07G03720Wax gourdcpiwgoB681
CSPI07G03720Wax gourdcpiwgoB691
CSPI07G03720Wax gourdcpiwgoB699
CSPI07G03720Wild cucumber (PI 183967)cpicpiB050
CSPI07G03720Wild cucumber (PI 183967)cpicpiB090
CSPI07G03720Wild cucumber (PI 183967)cpicpiB188
CSPI07G03720Cucumber (Gy14) v1cgycpiB029
CSPI07G03720Cucumber (Gy14) v1cgycpiB069
CSPI07G03720Cucumber (Gy14) v1cgycpiB220
CSPI07G03720Cucurbita maxima (Rimu)cmacpiB144
CSPI07G03720Cucurbita maxima (Rimu)cmacpiB233
CSPI07G03720Cucurbita maxima (Rimu)cmacpiB533
CSPI07G03720Cucurbita maxima (Rimu)cmacpiB576
CSPI07G03720Cucurbita maxima (Rimu)cmacpiB650