Csa7G037450 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G037450
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPolygalacturonase; contains IPR000743 (Glycoside hydrolase, family 28), IPR008238 (Chorismate mutase, AroQ class, eukaryotic type), IPR011050 (Pectin lyase fold/virulence factor)
LocationChr7 : 1932935 .. 1934065 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCAAACCCATTCTTTTCAAGTTAGCCATTAGGACAATATATAAGTAAATAAATAAAGTATAGAAGGCGTAGTAGTGATGGGATTGGCATTACTACCTTTCTTTTTATTGTTGGCATCTACTATTGAAGCCCAATCCCTTTTTGATGTTACAAGATATGGTGCCAAACCTAATACAGATATTACTCAGGCAAGTATATATGCAAAACTGATGAATTTTTTTTTTAATTTATTAGGAAGAAGACTTTAATTTGATGAGAGAACTAAAATTTTGCAGGCCTTATCAAAGAGAATCCATTATGGAAAATTCGTCGCAGAAGCTAAGTTTCAAGCCTCACCCGATGCCTACAAAGCAGCAATTAGAGCACAAGTAAATAAACTCAAATTAGATGGAAGCCCCCAATTGCCTGTTTTTCCACATCCCTACTGAATAACGTTTTCTTTGTGAAATTTCAAAGGATAAGCAAAAACTGATGGATATGCTGACGTACCCGACCGTAGAGGAGACCGTGAAAAGGAGAGTGGAGATGAAAGCAACGGTTTAAATCCATCAGAATTTGAAGTTCAGTTTCATCACCAATTCAATTGTGAAGGACATAACTTCCTTGGACAGTAAAAATTTCCACATCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAACACGTGACAATCAGTGCACCAGAGAATAGTCCCAACACTGATGGAATTCACATAAGTAGCTCTGAACAGATAAACATTCTCGATTCAAAAATCTCAACTGGAGATGATTGTGTGTCTGTTGGAGATAGCAACAAGCAAGTAACTATTACTAATGTAACTTGCGGACCAGGACATGGCATTAGCGTAGGAAGCTTGGGCAAGTACACCAAGGAAAAAGACGTGGTAGGAGTTACTGTGAAAGCATGCAAATTAATCAATACTACCAACGGTGTTAGAATCAAAACATGGCCAGATTCTGCCGGTGCATTCATAGCCTCTGACATGCACTTTGAAGATATTGAGATGCAAAACGTGAGCAACCCTGTCATTATAGACCAAGAATACTGTCCGTGGAATCAATGCAACAGAAAGGTATATATTGTATTGAAATTATACTTTATTTTGTTTATTAGTTAAACTTCATGAACTAA

mRNA sequence

ATGGGATTGGCATTACTACCTTTCTTTTTATTGTTGGCATCTACTATTGAAGCCCAATCCCTTTTTGATGTTACAAGATATGGTGCCAAACCTAATACAGATATTACTCAGGCAAAAGCTAAGTTTCAAGCCTCACCCGATGCCTACAAAGCAGCAATTAGAGCACAAGATAAGCAAAAACTGATGGATATGCTGACGTACCCGACCGTAGAGGAGACCAATTTGAAGTTCAGTTTCATCACCAATTCAATTGTGAAGGACATAACTTCCTTGGACAGTAAAAATTTCCACATCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAACACGTGACAATCAGTGCACCAGAGAATAGTCCCAACACTGATGGAATTCACATAAGTAGCTCTGAACAGATAAACATTCTCGATTCAAAAATCTCAACTGGAGATGATTGTGTGTCTGTTGGAGATAGCAACAAGCAAGTAACTATTACTAATGTAACTTGCGGACCAGGACATGGCATTAGCGTAGGAAGCTTGGGCAAGTACACCAAGGAAAAAGACGTGGTAGGAGTTACTGTGAAAGCATGCAAATTAATCAATACTACCAACGGTGTTAGAATCAAAACATGGCCAGATTCTGCCGGTGCATTCATAGCCTCTGACATGCACTTTGAAGATATTGAGATGCAAAACGTGAGCAACCCTGTCATTATAGACCAAGAATACTGTCCGTGGAATCAATGCAACAGAAAGTTAAACTTCATGAACTAA

Coding sequence (CDS)

ATGGGATTGGCATTACTACCTTTCTTTTTATTGTTGGCATCTACTATTGAAGCCCAATCCCTTTTTGATGTTACAAGATATGGTGCCAAACCTAATACAGATATTACTCAGGCAAAAGCTAAGTTTCAAGCCTCACCCGATGCCTACAAAGCAGCAATTAGAGCACAAGATAAGCAAAAACTGATGGATATGCTGACGTACCCGACCGTAGAGGAGACCAATTTGAAGTTCAGTTTCATCACCAATTCAATTGTGAAGGACATAACTTCCTTGGACAGTAAAAATTTCCACATCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAACACGTGACAATCAGTGCACCAGAGAATAGTCCCAACACTGATGGAATTCACATAAGTAGCTCTGAACAGATAAACATTCTCGATTCAAAAATCTCAACTGGAGATGATTGTGTGTCTGTTGGAGATAGCAACAAGCAAGTAACTATTACTAATGTAACTTGCGGACCAGGACATGGCATTAGCGTAGGAAGCTTGGGCAAGTACACCAAGGAAAAAGACGTGGTAGGAGTTACTGTGAAAGCATGCAAATTAATCAATACTACCAACGGTGTTAGAATCAAAACATGGCCAGATTCTGCCGGTGCATTCATAGCCTCTGACATGCACTTTGAAGATATTGAGATGCAAAACGTGAGCAACCCTGTCATTATAGACCAAGAATACTGTCCGTGGAATCAATGCAACAGAAAGTTAAACTTCATGAACTAA

Protein sequence

MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQKLMDMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKLNFMN*
Homology
[Close]
BLAST of Csa7G037450 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.2e-64
Identity = 109/173 (63.01%), Postives = 133/173 (76.88%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           N  F+F+ NSIV+ +TS DSKNFH+ + GCKN+TF   TI+AP +SPNTDGIH+  S  +
Sbjct: 149 NFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDV 208

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
            IL++ I TGDDCVS+GD +KQ+T+  V CGPGHG+SVGSLGK+T E++V G+TVK C L
Sbjct: 209 KILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTL 268

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRK 247
             T NGVRIKTWPD+ G    SD+HFEDI M NV NPVIIDQEY PWNQC++K
Sbjct: 269 TATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKK 321


HSP 2 Score: 33.5 bits (75), Expect = 4.1e+00
Identity = 16/36 (44.44%), Postives = 23/36 (63.89%), Query Frame = 1 

Query: 4  ALLPFFLLLASTIEAQS-LFDVTRYGAKPNTDITQA 39
          A++  FL +A    AQS + D++++G KPN+DI QA
Sbjct: 6  AIIVSFLFIADFCAAQSGVLDISKFGGKPNSDIGQA 41

[Close]
BLAST of Csa7G037450 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.1e-61
Identity = 111/174 (63.79%), Postives = 132/174 (75.86%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           NL F+ +TNS +KDIT+LDSK+FH+N+  CKN+TF    +SAP NSPNTDGIH+S S  +
Sbjct: 143 NLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSV 202

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
           NI DS  STGDDC+SVGD  +Q+ IT VTCGPGHGISVGSLG    EK VVGV V+ C  
Sbjct: 203 NITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTF 262

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKL 248
            NT NGVRIKTWP S    + +D+HFEDI +QNVSNPV+IDQ YCP+N+CN+ L
Sbjct: 263 TNTDNGVRIKTWPASHPG-VVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDL 315


HSP 2 Score: 30.4 bits (67), Expect = 3.5e+01
Identity = 15/30 (50.00%), Postives = 20/30 (66.67%), Query Frame = 1 

Query: 10 LLLASTIEAQS-LFDVTRYGAKPNTDITQA 39
          L LA   E+Q+ +FD+T+YGA  N DI++A
Sbjct: 14 LFLAHFGESQTGVFDITKYGANSNADISEA 43

[Close]
BLAST of Csa7G037450 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.1e-59
Identity = 96/172 (55.81%), Postives = 129/172 (75.00%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           N++F F+TN++++DITS DSK FHIN+  CKN+T + + I AP+ SPNTDGIH+  SE +
Sbjct: 151 NIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
           NI+ S I TGDDC+S+GD  K + I  +TCGPGHGIS+GSLGK+  E+ V G+ +  C +
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNR 246
            NT+NG RIKTWP   G  + S++HFEDI M NVS+P++IDQ+YCPWN+C +
Sbjct: 271 TNTSNGARIKTWPGEHGGAV-SEIHFEDITMNNVSSPILIDQQYCPWNKCKK 321

[Close]
BLAST of Csa7G037450 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.6e-59
Identity = 96/172 (55.81%), Postives = 129/172 (75.00%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           N++F F+TN++++DITS DSK FHIN+  CKN+T + + I AP+ SPNTDGIH+  SE +
Sbjct: 151 NIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
           NI+ S I TGDDC+S+GD  K + I  +TCGPGHGIS+GSLGK+  E+ V G+ +  C +
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNR 246
            NT+NG RIKTWP   G  + S++HFEDI M NVS+P++IDQ+YCPWN+C +
Sbjct: 271 TNTSNGARIKTWPGEHGGAV-SEIHFEDITMNNVSSPILIDQQYCPWNKCKK 321

[Close]
BLAST of Csa7G037450 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-58
Identity = 101/174 (58.05%), Postives = 134/174 (77.01%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           NL+   +TNSI++D+T+LDSKNFH+N++GCKN+TF+   ISA E S NTDGIHI  S+ +
Sbjct: 109 NLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGV 168

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
           NI++++I TGDDC+S+GD +K + ITN+TCGPGHGISVGSLG+Y  E+ VVG+ VK C +
Sbjct: 169 NIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTI 228

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKL 248
             + NGVRIKTWP S     AS+MHF+DI M +V  P++IDQ YCP+NQC  ++
Sbjct: 229 TGSQNGVRIKTWPKSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEV 281

[Close]
BLAST of Csa7G037450 vs. TrEMBL
Match: A0A0A0K6J6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037450 PE=3 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 1.1e-140
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1 

Query: 1   MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQK 60
           MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQK
Sbjct: 1   MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQK 60

Query: 61  LMDMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSP 120
           LMDMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSP
Sbjct: 61  LMDMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSP 120

Query: 121 NTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKE 180
           NTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKE
Sbjct: 121 NTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKE 180

Query: 181 KDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPW 240
           KDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPW
Sbjct: 181 KDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPW 240

Query: 241 NQCNRKLNFMN 252
           NQCNRKLNFMN
Sbjct: 241 NQCNRKLNFMN 251

[Close]
BLAST of Csa7G037450 vs. TrEMBL
Match: A0A0A0LX75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066500 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.2e-84
Identity = 161/246 (65.45%), Postives = 185/246 (75.20%), Query Frame = 1 

Query: 3   LALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQKLM 62
           + LLP FLLL S  + QS      +      D+T     F A P+     +R        
Sbjct: 8   VTLLPLFLLLVSNAKGQSAAGGGVF------DVTS----FGAKPNGDITGVRT------- 67

Query: 63  DMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNT 122
                       LK +FITNSIVKDITSLDSKN+HINLLGCKN+TF HVTI+APENSPNT
Sbjct: 68  ------------LKLNFITNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPENSPNT 127

Query: 123 DGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKD 182
           DGIH+SSSEQINIL++ I+TGDDC+SVGD+NKQ+ I++VTCGPGHGIS+GSLGKYTKEK+
Sbjct: 128 DGIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYTKEKE 187

Query: 183 VVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQ 242
           VVGVTVK CKL +TTNGVRIKTWPDS G F A+DMHFEDIEM NVSNP+IIDQEYCPWNQ
Sbjct: 188 VVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ 224

Query: 243 CNRKLN 249
           CNRK N
Sbjct: 248 CNRKEN 224

[Close]
BLAST of Csa7G037450 vs. TrEMBL
Match: A0A0A0KF15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434410 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 7.8e-83
Identity = 163/247 (65.99%), Postives = 184/247 (74.49%), Query Frame = 1 

Query: 3   LALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQKLM 62
           +A+LP  LLL S  +AQ         A+P+    Q         D  K   +        
Sbjct: 8   VAILPLLLLLVSNSKAQPA------AAQPSAQPAQPAGGAGGVFDITKYGAK-------- 67

Query: 63  DMLTYPTVEET-NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPN 122
                P  + T NLK +FITNSIV  ITSLDSKNFHINLLGCKN+TF HVTI+AP NSPN
Sbjct: 68  -----PNADITANLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPN 127

Query: 123 TDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEK 182
           TDGIH+SSSEQINIL++ I+TGDDC+SVGDSNKQV I++VTCGPGHGIS+GSLGKYTKEK
Sbjct: 128 TDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEK 187

Query: 183 DVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWN 242
           +VVGVTVK CKL  TTNGVRIKTWPDSA AF A+DMHFEDIEM NVSNP+IIDQEYCPWN
Sbjct: 188 EVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWN 235

Query: 243 QCNRKLN 249
           QCNRK N
Sbjct: 248 QCNRKEN 235

[Close]
BLAST of Csa7G037450 vs. TrEMBL
Match: A0A0A0KPH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266870 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.1e-81
Identity = 150/192 (78.12%), Postives = 166/192 (86.46%), Query Frame = 1 

Query: 59  QKLMDMLTYPTVEETN----LKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTIS 118
           Q + D+  Y     T+    LKF+F+TNSIVKDITSLDSKNFHINLLGCKN+TF+HVTIS
Sbjct: 24  QSVFDVTRYGAKPNTDITHTLKFNFVTNSIVKDITSLDSKNFHINLLGCKNITFEHVTIS 83

Query: 119 APENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSL 178
           APENSPNTDGIHISSSEQI IL++KISTGDDCVSVGDSNK +TI +VTCGPGHGIS+GSL
Sbjct: 84  APENSPNTDGIHISSSEQIRILNTKISTGDDCVSVGDSNKDITIRDVTCGPGHGISIGSL 143

Query: 179 GKYTKEKDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIID 238
           GKYTKEK V GV V  CKLI TTNGVRIKTWPDSA  + ASDMHFEDIEM +VSNP++ID
Sbjct: 144 GKYTKEKAVEGVWVTKCKLIKTTNGVRIKTWPDSAVKYSASDMHFEDIEMIDVSNPILID 203

Query: 239 QEYCPWNQCNRK 247
           QEYCPWNQCNRK
Sbjct: 204 QEYCPWNQCNRK 215

[Close]
BLAST of Csa7G037450 vs. TrEMBL
Match: A0A0A0KPH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266870 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.4e-63
Identity = 143/245 (58.37%), Postives = 162/245 (66.12%), Query Frame = 1 

Query: 3   LALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQKLM 62
           +A L    LLAST + QS+FDVTRYGAKPNTDIT    KF    ++    I + D +   
Sbjct: 8   VAFLSLLFLLASTTKGQSVFDVTRYGAKPNTDITHT-LKFNFVTNSIVKDITSLDSKNF- 67

Query: 63  DMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSP-N 122
                                    I  L  KN     +  ++VT      SAPENSP  
Sbjct: 68  ------------------------HINLLGCKN-----ITFEHVTI-----SAPENSPNT 127

Query: 123 TDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEK 182
            DGIHISSSEQI IL++KISTGDDCVSVGDSNK +TI +VTCGPGHGIS+GSLGKYTKEK
Sbjct: 128 -DGIHISSSEQIRILNTKISTGDDCVSVGDSNKDITIRDVTCGPGHGISIGSLGKYTKEK 187

Query: 183 DVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWN 242
            V GV V  CKLI TTNGVRIKTWPDSA  + ASDMHFEDIEM +VSNP++IDQEYCPWN
Sbjct: 188 AVEGVWVTKCKLIKTTNGVRIKTWPDSAVKYSASDMHFEDIEMIDVSNPILIDQEYCPWN 215

Query: 243 QCNRK 247
           QCNRK
Sbjct: 248 QCNRK 215


HSP 2 Score: 297.0 bits (759), Expect = 2.2e-77
Identity = 139/165 (84.24%), Postives = 154/165 (93.33%), Query Frame = 1 

Query: 84  IVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTG 143
           +VKDITSLDSKNFH NLLGCKNVTFQ+VTI APENSPNTDGIH+SSSE INI +++ISTG
Sbjct: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60

Query: 144 DDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKLINTTNGVRIK 203
           DDC+SVGDSNKQ+TITNVTCGPGHGIS+GSLGKYTKEK+V GVTVK+CKLINT+NGVRIK
Sbjct: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120

Query: 204 TWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKLN 249
           TWPD A A+ ASD+HFEDIEM NVSNPVIIDQEYCP NQCN+K N
Sbjct: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKQN 165

[Close]
BLAST of Csa7G037450 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 238.8 bits (608), Expect = 3.6e-63
Identity = 105/173 (60.69%), Postives = 136/173 (78.61%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           +++F F+ N+ ++DI+S+D+KNFHIN+LG KN+TF +V + AP  SPNTDGIH+  SE +
Sbjct: 141 SIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGV 200

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
            IL+SKI+TGDDC+SVGD  K + + NV CGPGHGISVGSLG+Y  E+DV G+TV  C L
Sbjct: 201 KILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTL 260

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRK 247
             T NG+RIKTWP +A A  AS +HFE+I + NVSNP++IDQEYCPWNQCN++
Sbjct: 261 QGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQ 313

[Close]
BLAST of Csa7G037450 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 235.3 bits (599), Expect = 4.0e-62
Identity = 105/173 (60.69%), Postives = 137/173 (79.19%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           +++F FI NS ++DI+S+D+KNFHIN+LG KN+T  ++ I APE+SPNTDGIH+  S+ +
Sbjct: 140 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 199

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
            IL+S ISTGDDC+SVGD  K + +  VTCGPGHGISVGSLG+Y  E+DV G+ V  C L
Sbjct: 200 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 259

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRK 247
             T NG+RIKTWP +A +  ASD+HFEDI +++VSNP++IDQEYCPWNQCN++
Sbjct: 260 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQ 312

[Close]
BLAST of Csa7G037450 vs. TAIR10
Match: AT3G07830.1 (AT3G07830.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 232.3 bits (591), Expect = 3.4e-61
Identity = 102/173 (58.96%), Postives = 137/173 (79.19%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           +++F F+TN+ ++DI+S+D+KNFHIN++G KN+TF +V I AP  SPNTDGIH+  S  +
Sbjct: 141 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 200

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
           +I++S+ISTGDDCVSVGD    + + NV CGPGHGISVGSLG+Y  E+DV G+ V  C L
Sbjct: 201 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 260

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRK 247
             T NG+RIKTWP +A +  AS++HFE+I ++NVSNP++IDQEYCPWNQCN++
Sbjct: 261 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQ 313

[Close]
BLAST of Csa7G037450 vs. TAIR10
Match: AT5G48140.1 (AT5G48140.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 231.1 bits (588), Expect = 7.5e-61
Identity = 102/173 (58.96%), Postives = 137/173 (79.19%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           +++F F+T++ ++ ITSLD+K+FHIN++G KNVTF+ V I AP  SPNTDGIH+  S+ I
Sbjct: 140 SIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGI 199

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
            I++S ISTGDDCVSVGD  K + +  VTCGPGHGIS+GSLG+Y+ E++V G+ +  C L
Sbjct: 200 KIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTL 259

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRK 247
             T NG+RIKTWP +A    ASD+HFE+I ++NVSNP++IDQEYCPWNQCN++
Sbjct: 260 QETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQ 312

[Close]
BLAST of Csa7G037450 vs. TAIR10
Match: AT3G07850.1 (AT3G07850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 208.0 bits (528), Expect = 6.8e-54
Identity = 97/170 (57.06%), Postives = 122/170 (71.76%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           N++F+ +TNS +  ITS +SK FH+N+L CKN+T   + I AP  S NTDGIHI  S  +
Sbjct: 191 NIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGV 250

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
           N++ +KI TGDDCVS+GD  + + + NV CGPGHGIS+GSLG+Y  E+ V GVTV+ C +
Sbjct: 251 NLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLI 310

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQC 244
            NT NGVRIKTWP S    IAS++ FEDI M NVS PV+IDQEYCP+  C
Sbjct: 311 KNTDNGVRIKTWPGSPPG-IASNILFEDITMDNVSLPVLIDQEYCPYGHC 359

[Close]
BLAST of Csa7G037450 vs. NCBI nr
Match: gi|700188208|gb|KGN43441.1| (hypothetical protein Csa_7G037450 [Cucumis sativus])

HSP 1 Score: 507.3 bits (1305), Expect = 1.5e-140
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1 

Query: 1   MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQK 60
           MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQK
Sbjct: 1   MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQK 60

Query: 61  LMDMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSP 120
           LMDMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSP
Sbjct: 61  LMDMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSP 120

Query: 121 NTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKE 180
           NTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKE
Sbjct: 121 NTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKE 180

Query: 181 KDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPW 240
           KDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPW
Sbjct: 181 KDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPW 240

Query: 241 NQCNRKLNFMN 252
           NQCNRKLNFMN
Sbjct: 241 NQCNRKLNFMN 251

[Close]
BLAST of Csa7G037450 vs. NCBI nr
Match: gi|778730096|ref|XP_011659697.1| (PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 2.0e-95
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI
Sbjct: 3   NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 62

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
           NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL
Sbjct: 63  NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 122

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKL 248
           INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRK+
Sbjct: 123 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKV 176

[Close]
BLAST of Csa7G037450 vs. NCBI nr
Match: gi|659133904|ref|XP_008466943.1| (PREDICTED: polygalacturonase-like, partial [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 4.7e-89
Identity = 158/174 (90.80%), Postives = 169/174 (97.13%), Query Frame = 1 

Query: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133
           NLKFSF+TNS VKDITSLDSKNFHINLLGCKNVTFQHVTI+AP+ SPNTDGIHISSSE+I
Sbjct: 1   NLKFSFVTNSTVKDITSLDSKNFHINLLGCKNVTFQHVTINAPDESPNTDGIHISSSEEI 60

Query: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193
            ILDSKI+TGDDCVSVGDSNKQVTITNVTCGPGHGIS+GSLGKYTKEKDVVGVTVKACK+
Sbjct: 61  YILDSKIATGDDCVSVGDSNKQVTITNVTCGPGHGISIGSLGKYTKEKDVVGVTVKACKI 120

Query: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKL 248
            NTTNGVRIKTWPDSA AF+ASDMHFEDIEM+NVSNP+IIDQEYCPWNQCNRK+
Sbjct: 121 FNTTNGVRIKTWPDSAVAFMASDMHFEDIEMENVSNPIIIDQEYCPWNQCNRKV 174

[Close]
BLAST of Csa7G037450 vs. NCBI nr
Match: gi|700209485|gb|KGN64581.1| (hypothetical protein Csa_1G066500 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 6.0e-84
Identity = 161/246 (65.45%), Postives = 185/246 (75.20%), Query Frame = 1 

Query: 3   LALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQAKAKFQASPDAYKAAIRAQDKQKLM 62
           + LLP FLLL S  + QS      +      D+T     F A P+     +R        
Sbjct: 8   VTLLPLFLLLVSNAKGQSAAGGGVF------DVTS----FGAKPNGDITGVRT------- 67

Query: 63  DMLTYPTVEETNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNT 122
                       LK +FITNSIVKDITSLDSKN+HINLLGCKN+TF HVTI+APENSPNT
Sbjct: 68  ------------LKLNFITNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPENSPNT 127

Query: 123 DGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKD 182
           DGIH+SSSEQINIL++ I+TGDDC+SVGD+NKQ+ I++VTCGPGHGIS+GSLGKYTKEK+
Sbjct: 128 DGIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYTKEKE 187

Query: 183 VVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQ 242
           VVGVTVK CKL +TTNGVRIKTWPDS G F A+DMHFEDIEM NVSNP+IIDQEYCPWNQ
Sbjct: 188 VVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ 224

Query: 243 CNRKLN 249
           CNRK N
Sbjct: 248 CNRKEN 224

[Close]
BLAST of Csa7G037450 vs. NCBI nr
Match: gi|778658546|ref|XP_011652893.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 8.6e-83
Identity = 144/173 (83.24%), Postives = 163/173 (94.22%), Query Frame = 1 

Query: 75  LKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQIN 134
           LK +FITNSIVKDITSLDSKN+HINLLGCKN+TF HVTI+APENSPNTDGIH+SSSEQIN
Sbjct: 149 LKLNFITNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPENSPNTDGIHVSSSEQIN 208

Query: 135 ILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKLI 194
           IL++ I+TGDDC+SVGD+NKQ+ I++VTCGPGHGIS+GSLGKYTKEK+VVGVTVK CKL 
Sbjct: 209 ILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLT 268

Query: 195 NTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKL 248
           +TTNGVRIKTWPDS G F A+DMHFEDIEM NVSNP+IIDQEYCPWNQCNRK+
Sbjct: 269 STTNGVRIKTWPDSVGTFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKV 321

The following BLAST results are available for this feature:
BLAST of Csa7G037450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR_MEDSA5.2e-6463.01Polygalacturonase OS=Medicago sativa PE=2 SV=1[more]
PGLR_TOBAC7.1e-6163.79Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1[more]
PGLR_GOSBA5.1e-5955.81Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1[more]
PGLR_GOSHI6.6e-5955.81Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1[more]
PGLR_OENOR1.1e-5858.05Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1[more]
BLAST of Csa7G037450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6J6_CUCSA1.1e-140100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037450 PE=3 SV=1[more]
A0A0A0LX75_CUCSA4.2e-8465.45Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066500 PE=3 SV=1[more]
A0A0A0KF15_CUCSA7.8e-8365.99Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434410 PE=3 SV=1[more]
A0A0A0KPH7_CUCSA1.1e-8178.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266870 PE=3 SV=1[more]
A0A0A0KPH7_CUCSA2.4e-6358.37Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266870 PE=3 SV=1[more]
BLAST of Csa7G037450 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07840.13.6e-6360.69 Pectin lyase-like superfamily protein[more]
AT3G07820.14.0e-6260.69 Pectin lyase-like superfamily protein[more]
AT3G07830.13.4e-6158.96 Pectin lyase-like superfamily protein[more]
AT5G48140.17.5e-6158.96 Pectin lyase-like superfamily protein[more]
AT3G07850.16.8e-5457.06 Pectin lyase-like superfamily protein[more]
BLAST of Csa7G037450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188208|gb|KGN43441.1|1.5e-140100.00hypothetical protein Csa_7G037450 [Cucumis sativus][more]
gi|778730096|ref|XP_011659697.1|2.0e-9599.43PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus][more]
gi|659133904|ref|XP_008466943.1|4.7e-8990.80PREDICTED: polygalacturonase-like, partial [Cucumis melo][more]
gi|700209485|gb|KGN64581.1|6.0e-8465.45hypothetical protein Csa_1G066500 [Cucumis sativus][more]
gi|778658546|ref|XP_011652893.1|8.6e-8383.24PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR006626PbH1
IPR008238Chorismate_mutase_AroQ_euk
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
GO:0004106chorismate mutase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009073aromatic amino acid family biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0004106 chorismate mutase activity
molecular_function GO:0004650 polygalacturonase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU096689cucumber EST collection version 3.0transcribed_cluster
CU097467cucumber EST collection version 3.0transcribed_cluster
CU120945cucumber EST collection version 3.0transcribed_cluster
CU134486cucumber EST collection version 3.0transcribed_cluster
CU147962cucumber EST collection version 3.0transcribed_cluster
CU155037cucumber EST collection version 3.0transcribed_cluster
CU177060cucumber EST collection version 3.0transcribed_cluster
CU177443cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G037450.1Csa7G037450.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU177443CU177443transcribed_cluster
CU096689CU096689transcribed_cluster
CU177060CU177060transcribed_cluster
CU155037CU155037transcribed_cluster
CU134486CU134486transcribed_cluster
CU097467CU097467transcribed_cluster
CU120945CU120945transcribed_cluster
CU147962CU147962transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 73..247
score: 6.4
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 160..173
scor
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 183..204
score: 46.0coord: 103..129
score: 3.7coord: 214..235
score: 8400.0coord: 130..151
score: 1500.0coord: 153..173
score: 34
IPR008238Chorismate mutase, AroQ class, eukaryotic typeGENE3DG3DSA:1.10.590.10coord: 38..71
score: 5.
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 8..245
score: 5.54
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 72..245
score: 2.2
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 73..244
score: 9.3E
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 73..244
score: 9.3E