Cla015660 (gene) Watermelon (97103) v1

NameCla015660
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPolygalacturonase (AHRD V1 ***- E3VSV7_CUCPE); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28
LocationChr2 : 2438024 .. 2439532 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGGATTGAGATCTAACATTATGGCATTACTTATATTACCTTTGTTGTTATGGTTGGCATCAACTAGTAAAGGTCAATCTGTTTTTGACGTTACTACATATGGTGCCAAACCTAATACTGATATTACTCAGGTAAGTATATACTAACTTGATAAAAAATTTATTTTATAAAAAAGACTTTTATCTAATGAAATAATTCAATTTACAGGCGTTGGCAAATGCATGGAAGGATGCATGTGCGTCAACTATTCCCAGTAAATTATTGATTCCAGAAGGAGTTTACCAATTAAACCAATCCAACCTCAATGGTCATTGCAAGAGTTCTATTGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTCTCGATCCAATAGGAGATGGACTGGTTCTTTTTCAATATATTGATCAATTAACGTTGTCAGGCTTTGGTGTTTTTGATGGCCAAGGAAAAACAAGTTGGGGAAAAAATGATTGTCACTTAAAAAAAATATGCACCAAACTTCCCATGGTAAATTCTCAAACTATATTAGCCTCTCCTTTTTGTCTCATAAGATATATAACTTTTAAGTAATATATGTGTTTTTTTTAACTTGGTGACTTTTTTTTGGGGGGTGGGGGTGGGGTTAAAATTGGTCAGAATTTGAGGTTCAGTTTCGTCACCAATTCAATAGTAAAGGATATAACATCCTTGAATAGTAAGAGTTTTCATATCAATCTTTTGGGCTGCAAGAATGTGACTTTTCAAAATGTGACAATTATTGCACCCGAGAATAGCCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAAGAGATTAAAATTCTCAATACACAAATCTCAACAGGGGATGATTGTGTGTCTGTGGGAGATAGTAACAAGCAAATAACTATTACCAACGTAACTTGCGGACCAGGACATGGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTCGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATACCCAGCCACTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATAATAGACCAAGAATATTGTCCATCCAATCACTGCAACAAGAACGTATGTATTAACTTCAAAGTAATATTTTTGTTATGAAAAAAAAAAAGAGTAATGTTACATGACTAATGTTTTCTTATGTTCAGATTCCATCAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCAGAGGCACTTGTGTTACTCCCGTGGCAATTAAGTTTGTTTGTAGCAAAGATGTAGCATGCGAAGGTGTGAAAGTTACTGATATTGACCTAACTTACATCGGAAGCCGAGGACCAATTACGTCTCAATGTGCAAATGTTCTAAATCCCATCATTACTGGAAAACAAAACCCTCGTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGACTAA

mRNA sequence

ATGATGGGATTGAGATCTAACATTATGGCATTACTTATATTACCTTTGTTGTTATGGTTGGCATCAACTAGTAAAGGTCAATCTGTTTTTGACGTTACTACATATGGTGCCAAACCTAATACTGATATTACTCAGGCGTTGGCAAATGCATGGAAGGATGCATGTGCGTCAACTATTCCCAGTAAATTATTGATTCCAGAAGGAGTTTACCAATTAAACCAATCCAACCTCAATGGTCATTGCAAGAGTTCTATTGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTCTCGATCCAATAGGAGATGGACTGAATGTGACTTTTCAAAATGTGACAATTATTGCACCCGAGAATAGCCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAAGAGATTAAAATTCTCAATACACAAATCTCAACAGGGGATGATTGTGTGTCTGTGGGAGATAGTAACAAGCAAATAACTATTACCAACGTAACTTGCGGACCAGGACATGGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTCGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATACCCAGCCACTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATAATAGACCAAGAATATTGTCCATCCAATCACTGCAACAAGAACATTCCATCAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCAGAGGCACTTGTGTTACTCCCGTGGCAATTAAGTTTGTTTGTAGCAAAGATGTAGCATGCGAAGGTGTGAAAGTTACTGATATTGACCTAACTTACATCGGAAGCCGAGGACCAATTACGTCTCAATGTGCAAATGTTCTAAATCCCATCATTACTGGAAAACAAAACCCTCGTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGACTAA

Coding sequence (CDS)

ATGATGGGATTGAGATCTAACATTATGGCATTACTTATATTACCTTTGTTGTTATGGTTGGCATCAACTAGTAAAGGTCAATCTGTTTTTGACGTTACTACATATGGTGCCAAACCTAATACTGATATTACTCAGGCGTTGGCAAATGCATGGAAGGATGCATGTGCGTCAACTATTCCCAGTAAATTATTGATTCCAGAAGGAGTTTACCAATTAAACCAATCCAACCTCAATGGTCATTGCAAGAGTTCTATTGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTCTCGATCCAATAGGAGATGGACTGAATGTGACTTTTCAAAATGTGACAATTATTGCACCCGAGAATAGCCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAAGAGATTAAAATTCTCAATACACAAATCTCAACAGGGGATGATTGTGTGTCTGTGGGAGATAGTAACAAGCAAATAACTATTACCAACGTAACTTGCGGACCAGGACATGGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTCGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATACCCAGCCACTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATAATAGACCAAGAATATTGTCCATCCAATCACTGCAACAAGAACATTCCATCAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCAGAGGCACTTGTGTTACTCCCGTGGCAATTAAGTTTGTTTGTAGCAAAGATGTAGCATGCGAAGGTGTGAAAGTTACTGATATTGACCTAACTTACATCGGAAGCCGAGGACCAATTACGTCTCAATGTGCAAATGTTCTAAATCCCATCATTACTGGAAAACAAAACCCTCGTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGACTAA

Protein sequence

MMGLRSNIMALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGLNVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPSTD
BLAST of Cla015660 vs. Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-68
Identity = 124/219 (56.62%), Postives = 154/219 (70.32%), Query Frame = 1

Query: 103 GLNVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVT 162
           G N+TF N+ IIAP  SPNTDGIH+   E +KILNT+I+TGDDC+SVGD  K + I  V 
Sbjct: 169 GKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVV 228

Query: 163 CGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDI 222
           CGPGHGISVGSLG+Y  E++V  + V  C L  TSNG+RIKTWP +A    A  +HFEDI
Sbjct: 229 CGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAAGIHFEDI 288

Query: 223 EMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACE 282
            +  VSNPI+IDQEYCP N CNKN PS IK+ +++F+NIRGT     A+K +CSK   CE
Sbjct: 289 ILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTSENKDAVKLLCSKGHPCE 348

Query: 283 GVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRAC 322
            V++ DI++ Y G  GP T +C NV  P + G QNP+AC
Sbjct: 349 NVEIGDINIEYTGPDGPPTFECTNV-TPKLVGAQNPKAC 386

BLAST of Cla015660 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-68
Identity = 124/229 (54.15%), Postives = 158/229 (69.00%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+TF   TI AP +SPNTDGIH+  S ++KILNT I TGDDCVS+GD +KQIT+  V CG
Sbjct: 180 NITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCG 239

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHG+SVGSLGK+T E+ V G+ V  C L  T NGVRIKTWPD+ G    +D+HFEDI M
Sbjct: 240 PGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITM 299

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
            NV NP+IIDQEY P N C+K  PSKIK+S +SFKN++GT  T   +  +CS  V C+GV
Sbjct: 300 TNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGV 359

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPST 334
           ++ ++DL + G+  P T++C NV  P++TG   P   A  AP  +  +T
Sbjct: 360 ELNNVDLKFNGA--PTTAKCTNV-KPLVTGTA-PVCQAPGAPAASTTAT 404


HSP 2 Score: 95.9 bits (237), Expect = 8.9e-19
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1

Query: 13  ILPLLLWLASTSKGQS-VFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQ 72
           I+   L++A     QS V D++ +G KPN+DI QAL +AW +ACAST  +K++IP G YQ
Sbjct: 7   IIVSFLFIADFCAAQSGVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQ 66

Query: 73  LNQSNLNGHCKSSIEVQVEGTLQAPLDP 100
           LN   L G CK+ IE+QV+GT+QAP DP
Sbjct: 67  LNGIELKGPCKAPIELQVDGTIQAPADP 94

BLAST of Cla015660 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.6e-68
Identity = 128/222 (57.66%), Postives = 152/222 (68.47%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+TF    + AP NSPNTDGIHVS S  + I ++  STGDDC+SVGD  +Q+ IT VTCG
Sbjct: 174 NLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCG 233

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDS-AGVYPATDLHFEDIE 224
           PGHGISVGSLG    EK V GV V  C   NT NGVRIKTWP S  GV    D+HFEDI 
Sbjct: 234 PGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGV--VNDVHFEDII 293

Query: 225 MVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEG 284
           + NVSNP++IDQ YCP N CNK++PS++KIS VSF+NI+GT  T  A+  + SK V CEG
Sbjct: 294 VQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEG 353

Query: 285 VKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAA 326
           ++V DID+TY G  GP  S C N+  P + GKQNP  C  +A
Sbjct: 354 IEVGDIDITYSGKEGPAKSSCENI-KPSLKGKQNPPVCTASA 392


HSP 2 Score: 94.4 bits (233), Expect = 2.6e-18
Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = 1

Query: 16  LLLWLASTSKGQS-VFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQ 75
           +LL+LA   + Q+ VFD+T YGA  N DI++AL NA+K+AC ST PS ++IP+G + +NQ
Sbjct: 12  VLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQ 71

Query: 76  SNLNGHCKSSIEVQVEGTLQAPLDP----IGDGLNV 107
             L G CKS +E+Q++ TL+AP DP    +G+ L V
Sbjct: 72  VKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTV 107

BLAST of Cla015660 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.0e-67
Identity = 120/221 (54.30%), Postives = 151/221 (68.33%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+TF+   I A E S NTDGIH+  S+ + I+NT+I TGDDC+S+GD +K I ITN+TCG
Sbjct: 140 NLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSKNINITNITCG 199

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGISVGSLG+Y  E+ V G+ V  C +  + NGVRIKTWP S     A+++HF+DI M
Sbjct: 200 PGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSE-PGEASEMHFQDITM 259

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
            +V  PI+IDQ YCP N C   +PS +K+S +SFKNI+GT  T  A+K VCSK   C GV
Sbjct: 260 NSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAVKLVCSKSFPCNGV 319

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAA 326
           ++ DIDLTY G  GP TS C N+  P I GKQ P  C+ +A
Sbjct: 320 ELADIDLTYSGKGGPATSVCENI-KPTIKGKQIPAICSGSA 358


HSP 2 Score: 70.9 bits (172), Expect = 3.1e-11
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1

Query: 42  DITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDP 100
           D TQAL  AWK+ACAS  PS +L+P+G + +    L G CKSSI +Q++GTL+AP DP
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADP 58

BLAST of Cla015660 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.8e-67
Identity = 119/222 (53.60%), Postives = 155/222 (69.82%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+T + + I AP+ SPNTDGIH+  SE + I+ + I TGDDC+S+GD  K + I  +TCG
Sbjct: 182 NITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCG 241

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGIS+GSLGK+  E+ V G+ ++ C + NTSNG RIKTWP   G    +++HFEDI M
Sbjct: 242 PGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHG-GAVSEIHFEDITM 301

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
            NVS+PI+IDQ+YCP N C KN  SK+K+SN+SFKNIRGT   P AIKF+CS    C+ V
Sbjct: 302 NNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNV 361

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAP 327
           ++ DID+ + G+  P TSQC NV  PI +GK NP  C+   P
Sbjct: 362 ELADIDIKHNGAE-PATSQCLNV-KPITSGKLNPIPCSGPVP 400


HSP 2 Score: 86.7 bits (213), Expect = 5.4e-16
Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = 1

Query: 7   NIMALLILPLLLWLASTSKGQSVFDVTT-YGAKPN--TDITQALANAWKDACASTIPSKL 66
           NI+  + + LLL+++++      FDV   +GAK +  TD+++   +AWK+ACAS  PS +
Sbjct: 6   NIVPSMFVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTV 65

Query: 67  LIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDP 100
           +IP+G Y L++ NL G CK+ IE+ V+GT+QAP DP
Sbjct: 66  VIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADP 101

BLAST of Cla015660 vs. TrEMBL
Match: E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88
Identity = 158/232 (68.10%), Postives = 186/232 (80.17%), Query Frame = 1

Query: 103 GLNVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVT 162
           G N+TF ++ I AP NSPNTDGIH+  SE++ ILNT I+TGDDC+SVG +N++ITI++VT
Sbjct: 186 GKNLTFDHLKITAPHNSPNTDGIHLGDSEDVYILNTAIATGDDCISVGYTNRKITISDVT 245

Query: 163 CGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDI 222
           CGPGHGIS+GSLGKY  EKEV GV V KCKLI T+NGVRIK+WPDSA  YPA+D+HFEDI
Sbjct: 246 CGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYPASDMHFEDI 305

Query: 223 EMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACE 282
           EM NV+NPIIIDQEYCP N CN+ +PS IKIS VSFKNIRGT  TPVA+K VCSK   CE
Sbjct: 306 EMENVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNIRGTSSTPVAVKLVCSKSNPCE 365

Query: 283 GVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPSTD 335
           GV++ DIDLTY G  GP  S+C+NV  P I+GKQNP  CA+ AP    PSTD
Sbjct: 366 GVEIADIDLTYSGKEGPAVSECSNV-KPTISGKQNPPICAKPAPPETTPSTD 416

BLAST of Cla015660 vs. TrEMBL
Match: E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.2e-24
Identity = 67/107 (62.62%), Postives = 78/107 (72.90%), Query Frame = 1

Query: 2   MGLRSNIMALLILPLLLWLASTSKGQS-VFDVTTYGAKPNTDITQALANAWKDACASTIP 61
           MGL S  MAL+ L LLL   +T    S VFD+TT+GAKPN D TQALA+AWK+ACAS  P
Sbjct: 11  MGLLSKFMALIPLLLLLVSNATVGATSGVFDITTFGAKPNADATQALADAWKEACASATP 70

Query: 62  SKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQA-PLDPIGDGLNV 107
           SK+L+P+G YQL +S L G CKS IE+ VEGTLQA P D  GDGL V
Sbjct: 71  SKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLLV 117


HSP 2 Score: 299.7 bits (766), Expect = 4.5e-78
Identity = 166/338 (49.11%), Postives = 211/338 (62.43%), Query Frame = 1

Query: 2   MGLRSNIMALLILPLLLWLASTSKGQSVFDVTTYGAKP--NTDITQALANAWKDACASTI 61
           MGL+ NI    +L LLL  A+   G  +FDVT YGA+   N+DI+QAL  AW DAC+S +
Sbjct: 1   MGLKLNIATTSLL-LLLASAAEVSGDIIFDVTKYGARTDGNSDISQALLKAWGDACSSPV 60

Query: 62  PSKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDPI---GDGLNVTFQNVTIIAP 121
            S ++IP+G Y L Q  + G CK+ I   V+GT+ AP+D      +   +TFQ +     
Sbjct: 61  ASTVMIPDGTYALGQIIIAGPCKAPINFVVQGTVMAPVDTSRFRAEAGWITFQQIDQFTL 120

Query: 122 ENSPNTDG----------IHVSSSEEIKILNTQIS--TGDDCVSVGDSNKQITITNVTCG 181
                 DG          +  +   ++ I    IS  TGDDCVS+GD ++QI I  VTCG
Sbjct: 121 SGDGVFDGQGKIVWGTKCLSSAYCNQLPINTNTISFETGDDCVSIGDGSEQINIQRVTCG 180

Query: 182 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 241
           PGHGISVGSLGKY  E+ V G+ V  C L NT NGVR+KTWP S     A+++HFEDI M
Sbjct: 181 PGHGISVGSLGKYPNEEPVVGISVKNCTLTNTQNGVRVKTWPASHQG-TASEMHFEDIVM 240

Query: 242 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 301
            NV NPIIIDQEYCP N CN   PS+IKISNVSF+NIRGT  T VA+K +CS+ V C+ V
Sbjct: 241 NNVGNPIIIDQEYCPHNQCNLKSPSRIKISNVSFRNIRGTTSTQVAVKLICSQGVPCQDV 300

Query: 302 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACA 323
           ++ DI+L Y G+ GP  SQC N+  P + G Q PR CA
Sbjct: 301 ELGDINLEYNGNDGPAMSQCKNI-KPNVLGAQLPRICA 335

BLAST of Cla015660 vs. TrEMBL
Match: A0A0A0K3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.0e-77
Identity = 140/220 (63.64%), Postives = 171/220 (77.73%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+TFQ V IIAPENSPNTDGIH+  S  I IL ++I+TGDDC+S+GD +K+I + NV CG
Sbjct: 180 NLTFQGVNIIAPENSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVICG 239

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGIS+GSLGKY  E+ V GV+VN C +INT+NGVRIKTWP S     AT++HF DI M
Sbjct: 240 PGHGISIGSLGKYNNEEPVEGVIVNNCTIINTTNGVRIKTWPASPVAGIATNMHFSDITM 299

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
           VNVSNPI+IDQEYCP N CN+ IPS IKI+ VSFKNIRG+  TPVA+K +CS ++ CE V
Sbjct: 300 VNVSNPILIDQEYCPWNQCNREIPSNIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEV 359

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEA 325
           KV +IDL Y G +G ITS+C NV  PII+G QNP  C+ +
Sbjct: 360 KVANIDLVYNGIKGSITSECMNV-KPIISGIQNPPICSSS 398

BLAST of Cla015660 vs. TrEMBL
Match: A0A0A0K3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 9.6e-12
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 1

Query: 2   MGLRSNIMALLILPLLLWLASTSKGQS---VFDVTTYG-AKPNTDITQALANAWKDACAS 61
           MG+  +++ L+   L+  L+ T + +S   +F +  YG      D+T+AL +AW DACAS
Sbjct: 1   MGVIKHLILLVTTFLMSLLSFTIEARSHVDIFSLRKYGNIVSGADVTEALKDAWNDACAS 60

Query: 62  TIPSKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGLNVTFQNV 112
             PS ++IP+G +++ +    G CKS IE +V GTLQAP  P GD   +TF  V
Sbjct: 61  DRPSAVVIPKGTFKVREGEFKGPCKSPIEFRVHGTLQAPKHPHGDSW-ITFAYV 113


HSP 2 Score: 285.8 bits (730), Expect = 6.8e-74
Identity = 138/218 (63.30%), Postives = 171/218 (78.44%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+TF N+TI AP+ SPNTDGIH+  S  I I +++ISTGDDC+S+G  ++ ITI+ VTCG
Sbjct: 183 NLTFANITINAPDQSPNTDGIHIGRSSGIDITDSRISTGDDCISLGGGSQNITISRVTCG 242

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSA-GVYPATDLHFEDIE 224
           PGHGISVGSLGKY K++ V G+ V  C LINTSNGVR+KTWP S  G+  A+D+HFEDI 
Sbjct: 243 PGHGISVGSLGKY-KDEPVFGINVVNCALINTSNGVRVKTWPASLEGI--ASDMHFEDIV 302

Query: 225 MVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEG 284
           MVNVSNP++IDQEYCPSN CN   PS++KISNVSFKNIRGT  T VA+K  CS  + CE 
Sbjct: 303 MVNVSNPVLIDQEYCPSNKCNLKAPSRVKISNVSFKNIRGTSATQVAVKLACSSGIPCEN 362

Query: 285 VKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRAC 322
           V++ DI+L+YIG++GP TSQC+NV  P I G+Q P AC
Sbjct: 363 VEIGDINLSYIGTKGPATSQCSNV-KPTIAGRQTPLAC 396

BLAST of Cla015660 vs. TrEMBL
Match: A0A061FNR4_THECC (Pectin lyase-like superfamily protein, putative OS=Theobroma cacao GN=TCM_043174 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16
Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 1

Query: 2   MGLRSNIMALLILPLLLWLASTSKGQSVFDVTTYGAKPN--TDITQALANAWKDACASTI 61
           M +  N++AL +L LL   A       VFDV  +GAK    TDI+QAL  AW++ACA   
Sbjct: 1   MAVELNVLALSLLFLLASNAKAQPNNGVFDVMNFGAKAGGKTDISQALMAAWREACALVS 60

Query: 62  PSKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDP 100
           PSK++IPEG Y L+Q  L G CK+ +EVQV G L+AP DP
Sbjct: 61  PSKVVIPEGEYVLSQVTLAGPCKAPVEVQVRGNLKAPADP 100


HSP 2 Score: 285.0 bits (728), Expect = 1.2e-73
Identity = 139/220 (63.18%), Postives = 163/220 (74.09%), Query Frame = 1

Query: 103 GLNVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVT 162
           G NVTF  V IIAPE+SPNTDGIH+  S  I I +T I TGDDCVS+GD  K+I+I  VT
Sbjct: 176 GQNVTFSRVKIIAPEDSPNTDGIHIGRSSGISITDTVIQTGDDCVSLGDGCKEISIRRVT 235

Query: 163 CGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDI 222
           CGPGHGISVGSLGKY+ E  V GV+V  C + NTSNGVR+KTWPDS     A++LHFEDI
Sbjct: 236 CGPGHGISVGSLGKYSNEDPVEGVIVRNCTIRNTSNGVRVKTWPDSHDGL-ASNLHFEDI 295

Query: 223 EMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACE 282
            M NV NP++IDQEYCP N CN  +PS+IKIS+VSFKNIRGT  T +A+  VCS    C+
Sbjct: 296 VMENVGNPVLIDQEYCPWNQCNAKVPSRIKISDVSFKNIRGTSTTALAVNLVCSSGFPCQ 355

Query: 283 GVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACA 323
            V++ DIDL Y G+ GPI SQC NV  P I+GKQNP  CA
Sbjct: 356 NVEIADIDLQYSGNDGPIMSQCKNV-KPTISGKQNPNPCA 393

BLAST of Cla015660 vs. NCBI nr
Match: gi|778723597|ref|XP_011658677.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 6.2e-105
Identity = 191/230 (83.04%), Postives = 206/230 (89.57%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           NVTFQNVTIIAPENSPNTDGIHVSSSE I I NT+ISTGDDC+SVGDSNKQITITNVTCG
Sbjct: 234 NVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGDDCISVGDSNKQITITNVTCG 293

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGIS+GSLGKYTKEKEVAGV V  CKLINTSNGVRIKTWPD A  Y A+DLHFEDIEM
Sbjct: 294 PGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKTWPDCAVAYTASDLHFEDIEM 353

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
           VNVSNP+IIDQEYCPSN CNK IPSKIKI+NVSFKNIRGT  T VA+KF+CS   +CEGV
Sbjct: 354 VNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGTSATFVAVKFICSTVFSCEGV 413

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPSTD 335
           +VTDIDL YIG++G ITSQC NV+ PIITGKQNPRAC EAAP+N+ PSTD
Sbjct: 414 EVTDIDLAYIGTQGRITSQCRNVI-PIITGKQNPRACVEAAPVNS-PSTD 461

BLAST of Cla015660 vs. NCBI nr
Match: gi|778723597|ref|XP_011658677.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 5.6e-37
Identity = 89/124 (71.77%), Postives = 99/124 (79.84%), Query Frame = 1

Query: 1   MMGLRSNIMALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIP 60
           MMGLRSNIM LL L LLL LAST+KGQS+FD+TTYGAKPNTDITQA ANAWKDACAST  
Sbjct: 59  MMGLRSNIMTLL-LHLLLMLASTAKGQSIFDITTYGAKPNTDITQAFANAWKDACASTYS 118

Query: 61  SKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGLNVTFQNVTIIAPENSP 120
           SKLLIP GVY LNQS L+G CKS+IEV++EGTLQA  DPIGDGL V FQ +  +    + 
Sbjct: 119 SKLLIPMGVYHLNQSILHGPCKSTIEVRMEGTLQAHPDPIGDGL-VLFQYIDQLTLSGTG 178

Query: 121 NTDG 125
             DG
Sbjct: 179 AFDG 180


HSP 2 Score: 380.2 bits (975), Expect = 3.8e-102
Identity = 188/230 (81.74%), Postives = 203/230 (88.26%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           NVTFQNVTIIAPE SPNTDGIHVS+SEEI ILNT+ISTGDDCVSVGD NKQITITNVTCG
Sbjct: 175 NVTFQNVTIIAPEKSPNTDGIHVSNSEEINILNTKISTGDDCVSVGDGNKQITITNVTCG 234

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGIS+GSLGKYT EKEVAGV V  C LINTSNGVRIK+WPDSA  Y A+DLHFEDIEM
Sbjct: 235 PGHGISIGSLGKYTTEKEVAGVTVKSCNLINTSNGVRIKSWPDSAVAYTASDLHFEDIEM 294

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
           VNVSNPIIIDQEYCPSN CNK IPSKIKI NVSFKNIRGT  T VAIKF+CSKD+ C+ V
Sbjct: 295 VNVSNPIIIDQEYCPSNQCNKKIPSKIKIRNVSFKNIRGTSATFVAIKFICSKDLPCDDV 354

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPSTD 335
           +V DI+L+Y G++G ITSQC NV+ PIITGKQNPRAC E APIN+ PSTD
Sbjct: 355 EVADINLSYTGTQGRITSQCRNVI-PIITGKQNPRACIEVAPINS-PSTD 402

BLAST of Cla015660 vs. NCBI nr
Match: gi|659110970|ref|XP_008455507.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 155.6 bits (392), Expect = 1.5e-34
Identity = 86/123 (69.92%), Postives = 98/123 (79.67%), Query Frame = 1

Query: 2   MGLRSNIMALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPS 61
           MGLRSNIMALL L LLL LAST+K QS+FD+TTYGAKPNTDITQ LANAWKDACAST PS
Sbjct: 1   MGLRSNIMALL-LHLLLMLASTAKCQSIFDITTYGAKPNTDITQVLANAWKDACASTNPS 60

Query: 62  KLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGLNVTFQNVTIIAPENSPN 121
           +LLIP GVYQLNQS L G C S+IEV++EGTLQA  DPIG GL V F+++  +    +  
Sbjct: 61  QLLIPTGVYQLNQSLLIGPCNSTIEVRMEGTLQAHPDPIGIGL-VLFRHIDQLTISGTGA 120

Query: 122 TDG 125
            DG
Sbjct: 121 FDG 121


HSP 2 Score: 367.9 bits (943), Expect = 1.9e-98
Identity = 176/230 (76.52%), Postives = 201/230 (87.39%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           NVTFQ+VTI APENSPNTDGIH+SSSE+I IL+++ISTGDDCVSVGDSNKQ+TITNVTCG
Sbjct: 34  NVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCG 93

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGISVGSLGKYTKEK+V GV V  CKLINT+NGVRIKTWPDSAG + A+D+HFEDIEM
Sbjct: 94  PGHGISVGSLGKYTKEKDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEM 153

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
            NVSNP+IIDQEYCP N CN+ +PSKIKIS VSFKNIRGT  TP+A+K VCSK + CEGV
Sbjct: 154 QNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPIAVKLVCSKSIPCEGV 213

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPSTD 335
           +V DI+LTY G RGPI S+CANV  P+ITGKQ+P+ CA+ AP  A PSTD
Sbjct: 214 EVADINLTYSGIRGPILSECANV-QPLITGKQSPQICAKPAPAGA-PSTD 261

BLAST of Cla015660 vs. NCBI nr
Match: gi|449445367|ref|XP_004140444.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 1.3e-97
Identity = 174/226 (76.99%), Postives = 198/226 (87.61%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+TF++VTI APENSPNTDGIH+SSSE+I+ILNT+ISTGDDCVSVGDSNK ITI +VTCG
Sbjct: 174 NITFEHVTISAPENSPNTDGIHISSSEQIRILNTKISTGDDCVSVGDSNKDITIRDVTCG 233

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGIS+GSLGKYTKEK V GV V KCKLI T+NGVRIKTWPDSA  Y A+D+HFEDIEM
Sbjct: 234 PGHGISIGSLGKYTKEKAVEGVWVTKCKLIKTTNGVRIKTWPDSAVKYSASDMHFEDIEM 293

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
           ++VSNPI+IDQEYCP N CN+ IPS IKIS VSFKNIRGT VTPVA+K VCSK + CE V
Sbjct: 294 IDVSNPILIDQEYCPWNQCNRKIPSSIKISKVSFKNIRGTTVTPVAVKLVCSKSIPCEAV 353

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAP 331
           +V DIDL Y G++G ITSQCANV  PII+GKQNPR CAEAAP++AP
Sbjct: 354 EVADIDLKYNGNKGSITSQCANV-KPIISGKQNPRICAEAAPVDAP 398

BLAST of Cla015660 vs. NCBI nr
Match: gi|449445367|ref|XP_004140444.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 9.2e-32
Identity = 76/103 (73.79%), Postives = 84/103 (81.55%), Query Frame = 1

Query: 2   MGLRSNIMALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPS 61
           MGLR N +A L   LL  LAST+KGQSVFDVT YGAKPNTDIT AL NAWK ACAST  S
Sbjct: 1   MGLRWNFVAFL--SLLFLLASTTKGQSVFDVTRYGAKPNTDITHALLNAWKGACASTSRS 60

Query: 62  KLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGL 105
           K+LIP+G+Y L+QSNL G CKSSIE+QV+GTLQAP DP GDGL
Sbjct: 61  KVLIPKGIYLLSQSNLKGPCKSSIEIQVQGTLQAPPDPKGDGL 101


HSP 2 Score: 359.8 bits (922), Expect = 5.3e-96
Identity = 174/230 (75.65%), Postives = 194/230 (84.35%), Query Frame = 1

Query: 105 NVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCG 164
           N+TF +VTI APENSPNTDGIHVSSSE+I ILNT I+TGDDC+SVGD+NKQI I++VTCG
Sbjct: 179 NLTFDHVTITAPENSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCG 238

Query: 165 PGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEM 224
           PGHGIS+GSLGKYTKEKEV GV V KCKL +T+NGVRIKTWPDS G +PATD+HFEDIEM
Sbjct: 239 PGHGISIGSLGKYTKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPATDMHFEDIEM 298

Query: 225 VNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGV 284
            NVSNPIIIDQEYCP N CN+ +PSKIKIS VSFKNIRGT  T VA+K VCS+   CE V
Sbjct: 299 DNVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATAVAVKIVCSQSNPCEEV 358

Query: 285 KVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPSTD 335
           +V DIDLTY GS GPI SQCANV  P+ITGKQNP  C E API+  PSTD
Sbjct: 359 EVADIDLTYSGSEGPIKSQCANV-KPVITGKQNPPICGEPAPIDG-PSTD 406

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PGLR_BRANA1.2e-6856.62Polygalacturonase OS=Brassica napus PE=2 SV=1[more]
PGLR_MEDSA2.1e-6854.15Polygalacturonase OS=Medicago sativa PE=2 SV=1[more]
PGLR_TOBAC3.6e-6857.66Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1[more]
PGLR_OENOR3.0e-6754.30Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1[more]
PGLR_GOSHI8.8e-6753.60Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
E3VSV7_CUCPE1.3e-8868.10Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1[more]
E3VSV7_CUCPE2.2e-2462.62Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1[more]
A0A0A0K3B7_CUCSA5.0e-7763.64Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1[more]
A0A0A0K3B7_CUCSA9.6e-1239.47Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1[more]
A0A061FNR4_THECC2.2e-1650.00Pectin lyase-like superfamily protein, putative OS=Theobroma cacao GN=TCM_043174... [more]
Match NameE-valueIdentityDescription
gi|778723597|ref|XP_011658677.1|6.2e-10583.04PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|778723597|ref|XP_011658677.1|5.6e-3771.77PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|659110970|ref|XP_008455507.1|1.5e-3469.92PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
gi|449445367|ref|XP_004140444.1|1.3e-9776.99PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|449445367|ref|XP_004140444.1|9.2e-3273.79PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR006626PbH1
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0004106 chorismate mutase activity
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015660Cla015660.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 55..95
score: 1.8E-4coord: 102..309
score: 8.8
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 160..173
scor
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 248..270
score: 2700.0coord: 103..129
score: 5.2coord: 214..235
score: 5400.0coord: 130..151
score: 1400.0coord: 183..204
score: 260.0coord: 153..173
score: 38
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 15..313
score: 1.11
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 12..99
score: 4.5E-14coord: 104..322
score: 2.8
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 1..322
score: 2.0E
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 1..322
score: 2.0E

The following gene(s) are paralogous to this gene:

None