Csa7G008460 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCGCTTGCCTAGTATTGTTCATGCTAAGCAAAGTTTTCAGCGTTCTTCAACAATGAGAAATGGAGCATCTCCAACGGTTGTAGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGACACAGAAGAGGCGTTTCGTCATCCCGCTATCTTGCTTGAACCAACCTTCATTTCAAGATTTATTAAGTCAAGCAGAAGAAGAGTTTGGATATGATCATTCAATGGGTGGCATCACAATTCCTTGCAGTGAAGCAATTTTTCTCAGTCTCACACAAAGCTGAAATCATGAACCAGAAGGATTAATTTAGTCTAGGTAGAACAGAAAAAGGATTAGAATAGCACCGATTCACAGAATGTAGACATAATATTTTTGAATGA ATGGGTTTCCGCTTGCCTAGTATTGTTCATGCTAAGCAAAGTTTTCAGCGTTCTTCAACAATGAGAAATGGAGCATCTCCAACGGTTGTAGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGACACAGAAGAGGCGTTTCGTCATCCCGCTATCTTGCTTGAACCAACCTTCATTTCAAGATTTATTAAGTCAAGCAGAAGAAGAGTTTGGATATGATCATTCAATGGGTGGCATCACAATTCCTTGCAGTGAAGCAATTTTTCTCAGTCTCACACAAAGCTGA ATGGGTTTCCGCTTGCCTAGTATTGTTCATGCTAAGCAAAGTTTTCAGCGTTCTTCAACAATGAGAAATGGAGCATCTCCAACGGTTGTAGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGACACAGAAGAGGCGTTTCGTCATCCCGCTATCTTGCTTGAACCAACCTTCATTTCAAGATTTATTAAGTCAAGCAGAAGAAGAGTTTGGATATGATCATTCAATGGGTGGCATCACAATTCCTTGCAGTGAAGCAATTTTTCTCAGTCTCACACAAAGCTGA MGFRLPSIVHAKQSFQRSSTMRNGASPTVVDVPKGYFTVYVGETQKRRFVIPLSCLNQPSFQDLLSQAEEEFGYDHSMGGITIPCSEAIFLSLTQS*
BLAST of Csa7G008460 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.1e-25 Identity = 60/94 (63.83%), Postives = 67/94 (71.28%), Query Frame = 1
BLAST of Csa7G008460 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.6e-24 Identity = 58/94 (61.70%), Postives = 68/94 (72.34%), Query Frame = 1
BLAST of Csa7G008460 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.0e-23 Identity = 58/94 (61.70%), Postives = 65/94 (69.15%), Query Frame = 1
BLAST of Csa7G008460 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22 Identity = 56/94 (59.57%), Postives = 61/94 (64.89%), Query Frame = 1
BLAST of Csa7G008460 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22 Identity = 57/94 (60.64%), Postives = 61/94 (64.89%), Query Frame = 1
BLAST of Csa7G008460 vs. TrEMBL
Match: A0A0A0K2F0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008460 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 2.7e-47 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1
BLAST of Csa7G008460 vs. TrEMBL
Match: A0A0A0K4J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008980 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.1e-35 Identity = 77/96 (80.21%), Postives = 83/96 (86.46%), Query Frame = 1
BLAST of Csa7G008460 vs. TrEMBL
Match: A0A0A0K5T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009020 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.4e-35 Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 1
BLAST of Csa7G008460 vs. TrEMBL
Match: A0A0A0K160_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008990 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 4.4e-34 Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 1
BLAST of Csa7G008460 vs. TrEMBL
Match: A0A0A0K0H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009010 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 6.4e-33 Identity = 73/96 (76.04%), Postives = 80/96 (83.33%), Query Frame = 1
BLAST of Csa7G008460 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25 Identity = 51/94 (54.26%), Postives = 69/94 (73.40%), Query Frame = 1
BLAST of Csa7G008460 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.1 bits (248), Expect = 7.7e-22 Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 1
BLAST of Csa7G008460 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.1 bits (240), Expect = 6.5e-21 Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = 1
BLAST of Csa7G008460 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 96.7 bits (239), Expect = 8.5e-21 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 1
BLAST of Csa7G008460 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 96.7 bits (239), Expect = 8.5e-21 Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = 1
BLAST of Csa7G008460 vs. NCBI nr
Match: gi|700187966|gb|KGN43199.1| (hypothetical protein Csa_7G008460 [Cucumis sativus]) HSP 1 Score: 195.7 bits (496), Expect = 3.8e-47 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1
BLAST of Csa7G008460 vs. NCBI nr
Match: gi|778722823|ref|XP_011658575.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 1.5e-35 Identity = 77/96 (80.21%), Postives = 83/96 (86.46%), Query Frame = 1
BLAST of Csa7G008460 vs. NCBI nr
Match: gi|778722830|ref|XP_004144905.2| (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]) HSP 1 Score: 156.8 bits (395), Expect = 2.0e-35 Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 1
BLAST of Csa7G008460 vs. NCBI nr
Match: gi|659094350|ref|XP_008448013.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 154.5 bits (389), Expect = 9.8e-35 Identity = 77/96 (80.21%), Postives = 82/96 (85.42%), Query Frame = 1
BLAST of Csa7G008460 vs. NCBI nr
Match: gi|659094356|ref|XP_008448016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 152.5 bits (384), Expect = 3.7e-34 Identity = 75/96 (78.12%), Postives = 81/96 (84.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |