Csa6G519670 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGCTTCCCATAAAGATGAATTGTATTCTATTCAATTTCCCTCTCTTTACTATTTCTTAAATCGTTTACTTAATACCTAATTTTACACTCTCCCCTCAGATTAGTGTTTATCCTTTACTTCTTCTTCCTTTTATTTTTTTTTATGTCACATCCAGATACTACTGCCAGAGAGAGAGACAGGAGGAAATAGAGGTATTTCACCTGGAGGAGGCCATTTGGAGCCGACCCAGATGACCAGATCTCTCTGTTTTGTTGTTTTCATTTTCAATTTATGAAGTAAACGCTTTCCCTGGAAGAATTTTTCGTATTTAAAAGTAAACTCTCTACTCATTTTCTTCTGTGGAGTTTCTCCTCAGGAACAAGGCATTTATATCTTTCATTGGTGAAACAAAGCTGTAACCAAAATGATGTTTCTCATCATGTACACTAAAGCCTTTGGATTATAAGATGGGGCGATTCTTTTGAGTTTGTTTTTCTCCCTTTTCGTGGGGGATTACCCACTTTCATTTTCGACTGAAATTTTCATTATGTATCAATTAGTTGAGTGATGCATTCTGATACTGTGGTGAGTTACTAGTTTTGTGAACGAAGTATTTCGGAACAGCTTTTGCGGGAATCTGGGTTGACAAGAAAAATATTTTTTGGTAAATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGCGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGATAGGATCGAGGCTACCATTGTGATTATCCCAGAAAGCCTCGCCTCTGCTGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGAGACAAGGGAGGGTTCGAATCTGAACCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGGGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTGTGAAGAACAATGGAATGGGGTTGGGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTAAAGCCAAAAGGGGGTAAAGGGTTTATTGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCGTCCAATCAAACCTCAGAGGCTAAAACTGGGACCAGTACTTCAGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGGTTCTTTCTTCTCTCTCTCTCTTCTAGTTTGATATGAAGCTATGTACCGTTTATTTAAGATTTGGCATTGACATTTGATGAAGTGTTGTGGTTTTGGTTATCTATTTTTGTTCTATTACTTTGGCTGCTAATCCGGCCATTTAACTAATACTTTTGACTTTTATCTTTCCTCATTTGTTTTATAATCTAGTCTTCTTTTGGCTCTTTTGCGTCCAAAAGGATTACCCGATTTAGTTTACTGACCTGTAGAAATAGTAACCCCTTTCATTTCTGTAAGCACACAAATTAAAAGGAGCCAGTTTATGAATATGGAGGAAGAAAGTTTAAGGCTGTATCCATCCTTTTGTTGGTTTCTGTCATATTGTAAAAGTCTCCTGTAAAGTTAGTCTACCCTTGATTTTGTTTTGTGCTATCAATTTAAATCTGTCGCTGCTATACCAACTTGGTTCTTCCTTCAGGTATAGTATTGGAAAATTGTAATAAGGGTTCATCGAATTAAGTATCTCTTCCCCTAAAGCGTTTTTCAAGGTGGCATGAGCAGTTATACAATCAATGAAATGGAGTAATGACATAAAGTTACAATCACGTGTCTAAGGGGTTCAAATATGGTTATAGAATATTATGAAAGGGTTACAAAATGTTTATTTTTATCACCTCTTTTGGTTCAAACTTAGAACTTCCCATTTCCAGGTGTCCCTTCAACCTCTTCAAGAGGACTTTAATACTAACTCTAGAGTTGGGAGTGATATTTGATGGCTGATTGTGTTTGAACAATTCAATGATAGATTTAAGGATAATTTTTGTTTAACAGCTTTTGGCGTTTCACATAGATACTGCCAAATGGATTGTAAAGCAAGTTGAAACGAAGTAATTTCCTTGAAGTTGAAATATGCTGCACAAGAGATTGAGTATTGAATGGTATAACATTGATAAAGTCAACTACTTGTTTCTGTGCATTTGCATGTGAAAATAAAAGGAAAAAAAATCCAAAACGATGATTTGCCAATTGGCAACTCCTGTTTTTAAATTACATTGTCTTTCATATTGTCAAATGAGCCGATGATTATCTAATCATAATCATTTTGGTTAATACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTTGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAGTGGAAACACATCAAACGGGGGTGGTGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAGCAAGTGTCAAGAAAAAAAAGAAAAGAAAAGAAAAAGAAGAATTCTTCTTTTCCCATGGAACGGTTGACGTTTTCAACTTAACTTTGCTCTAATGCTGTTTAAACCCTGTACATCTTACAATCTTGCCAAACAGATGAATTTGTGGCTGGGGTTTTTTTTTTTTTTTTTTTTCAGTGCAGTTTCTGCAGCTTTTGCTTCGAGAATTGCTCACTTTTCTGTTAACAAAGCTTTTGTGAATGATTATGACCGATGTTTGAGTTTGTGATGATTTTGTAAGATG ATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGCGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGATAGGATCGAGGCTACCATTGTGATTATCCCAGAAAGCCTCGCCTCTGCTGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGAGACAAGGGAGGGTTCGAATCTGAACCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGGGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTGTGAAGAACAATGGAATGGGGTTGGGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTAAAGCCAAAAGGGGGTAAAGGGTTTATTGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCGTCCAATCAAACCTCAGAGGCTAAAACTGGGACCAGTACTTCAGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTTGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAGTGGAAACACATCAAACGGGGGTGGTGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAG ATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGCGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGATAGGATCGAGGCTACCATTGTGATTATCCCAGAAAGCCTCGCCTCTGCTGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGAGACAAGGGAGGGTTCGAATCTGAACCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGGGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTGTGAAGAACAATGGAATGGGGTTGGGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTAAAGCCAAAAGGGGGTAAAGGGTTTATTGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCGTCCAATCAAACCTCAGAGGCTAAAACTGGGACCAGTACTTCAGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTTGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAGTGGAAACACATCAAACGGGGGTGGTGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAG MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGGEAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF*
BLAST of Csa6G519670 vs. TrEMBL
Match: A0A0A0KHW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519670 PE=4 SV=1) HSP 1 Score: 569.7 bits (1467), Expect = 1.9e-159 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1
BLAST of Csa6G519670 vs. TrEMBL
Match: A0A061GDI8_THECC (RING/FYVE/PHD zinc finger superfamily protein, putative OS=Theobroma cacao GN=TCM_029667 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.3e-62 Identity = 126/249 (50.60%), Postives = 167/249 (67.07%), Query Frame = 1
BLAST of Csa6G519670 vs. TrEMBL
Match: M5WUB0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009296mg PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.9e-61 Identity = 139/299 (46.49%), Postives = 181/299 (60.54%), Query Frame = 1
BLAST of Csa6G519670 vs. TrEMBL
Match: F6HMA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g01500 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.4e-61 Identity = 123/225 (54.67%), Postives = 155/225 (68.89%), Query Frame = 1
BLAST of Csa6G519670 vs. TrEMBL
Match: W9RP22_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005813 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 2.1e-60 Identity = 125/283 (44.17%), Postives = 172/283 (60.78%), Query Frame = 1
BLAST of Csa6G519670 vs. TAIR10
Match: AT2G34200.1 (AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27 Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 1
BLAST of Csa6G519670 vs. TAIR10
Match: AT5G05830.1 (AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 119.0 bits (297), Expect = 4.6e-27 Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 1
BLAST of Csa6G519670 vs. TAIR10
Match: AT5G59000.1 (AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22 Identity = 55/153 (35.95%), Postives = 65/153 (42.48%), Query Frame = 1
BLAST of Csa6G519670 vs. TAIR10
Match: AT2G37950.1 (AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21 Identity = 51/133 (38.35%), Postives = 68/133 (51.13%), Query Frame = 1
BLAST of Csa6G519670 vs. TAIR10
Match: AT5G01070.2 (AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 96.3 bits (238), Expect = 3.2e-20 Identity = 55/134 (41.04%), Postives = 71/134 (52.99%), Query Frame = 1
BLAST of Csa6G519670 vs. NCBI nr
Match: gi|778721140|ref|XP_011658254.1| (PREDICTED: uncharacterized protein LOC105435966 [Cucumis sativus]) HSP 1 Score: 569.7 bits (1467), Expect = 2.8e-159 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1
BLAST of Csa6G519670 vs. NCBI nr
Match: gi|659078443|ref|XP_008439727.1| (PREDICTED: uncharacterized protein LOC103484442 [Cucumis melo]) HSP 1 Score: 544.7 bits (1402), Expect = 9.5e-152 Identity = 262/274 (95.62%), Postives = 266/274 (97.08%), Query Frame = 1
BLAST of Csa6G519670 vs. NCBI nr
Match: gi|470115560|ref|XP_004293966.1| (PREDICTED: uncharacterized protein LOC101301561 [Fragaria vesca subsp. vesca]) HSP 1 Score: 249.6 bits (636), Expect = 6.3e-63 Identity = 132/277 (47.65%), Postives = 170/277 (61.37%), Query Frame = 1
BLAST of Csa6G519670 vs. NCBI nr
Match: gi|590623497|ref|XP_007025338.1| (RING/FYVE/PHD zinc finger superfamily protein, putative [Theobroma cacao]) HSP 1 Score: 248.1 bits (632), Expect = 1.8e-62 Identity = 126/249 (50.60%), Postives = 167/249 (67.07%), Query Frame = 1
BLAST of Csa6G519670 vs. NCBI nr
Match: gi|645237675|ref|XP_008225316.1| (PREDICTED: uncharacterized protein LOC103324972 [Prunus mume]) HSP 1 Score: 247.3 bits (630), Expect = 3.1e-62 Identity = 129/234 (55.13%), Postives = 162/234 (69.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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