Csa6G519670 (gene) Cucumber (Chinese Long) v2

NameCsa6G519670
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionZinc finger family protein; contains IPR011016 (Zinc finger, RING-CH-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr6 : 27663525 .. 27666372 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCTTCCCATAAAGATGAATTGTATTCTATTCAATTTCCCTCTCTTTACTATTTCTTAAATCGTTTACTTAATACCTAATTTTACACTCTCCCCTCAGATTAGTGTTTATCCTTTACTTCTTCTTCCTTTTATTTTTTTTTATGTCACATCCAGATACTACTGCCAGAGAGAGAGACAGGAGGAAATAGAGGTATTTCACCTGGAGGAGGCCATTTGGAGCCGACCCAGATGACCAGATCTCTCTGTTTTGTTGTTTTCATTTTCAATTTATGAAGTAAACGCTTTCCCTGGAAGAATTTTTCGTATTTAAAAGTAAACTCTCTACTCATTTTCTTCTGTGGAGTTTCTCCTCAGGAACAAGGCATTTATATCTTTCATTGGTGAAACAAAGCTGTAACCAAAATGATGTTTCTCATCATGTACACTAAAGCCTTTGGATTATAAGATGGGGCGATTCTTTTGAGTTTGTTTTTCTCCCTTTTCGTGGGGGATTACCCACTTTCATTTTCGACTGAAATTTTCATTATGTATCAATTAGTTGAGTGATGCATTCTGATACTGTGGTGAGTTACTAGTTTTGTGAACGAAGTATTTCGGAACAGCTTTTGCGGGAATCTGGGTTGACAAGAAAAATATTTTTTGGTAAATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGCGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGATAGGATCGAGGCTACCATTGTGATTATCCCAGAAAGCCTCGCCTCTGCTGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGAGACAAGGGAGGGTTCGAATCTGAACCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGGGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTGTGAAGAACAATGGAATGGGGTTGGGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTAAAGCCAAAAGGGGGTAAAGGGTTTATTGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCGTCCAATCAAACCTCAGAGGCTAAAACTGGGACCAGTACTTCAGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGGTTCTTTCTTCTCTCTCTCTCTTCTAGTTTGATATGAAGCTATGTACCGTTTATTTAAGATTTGGCATTGACATTTGATGAAGTGTTGTGGTTTTGGTTATCTATTTTTGTTCTATTACTTTGGCTGCTAATCCGGCCATTTAACTAATACTTTTGACTTTTATCTTTCCTCATTTGTTTTATAATCTAGTCTTCTTTTGGCTCTTTTGCGTCCAAAAGGATTACCCGATTTAGTTTACTGACCTGTAGAAATAGTAACCCCTTTCATTTCTGTAAGCACACAAATTAAAAGGAGCCAGTTTATGAATATGGAGGAAGAAAGTTTAAGGCTGTATCCATCCTTTTGTTGGTTTCTGTCATATTGTAAAAGTCTCCTGTAAAGTTAGTCTACCCTTGATTTTGTTTTGTGCTATCAATTTAAATCTGTCGCTGCTATACCAACTTGGTTCTTCCTTCAGGTATAGTATTGGAAAATTGTAATAAGGGTTCATCGAATTAAGTATCTCTTCCCCTAAAGCGTTTTTCAAGGTGGCATGAGCAGTTATACAATCAATGAAATGGAGTAATGACATAAAGTTACAATCACGTGTCTAAGGGGTTCAAATATGGTTATAGAATATTATGAAAGGGTTACAAAATGTTTATTTTTATCACCTCTTTTGGTTCAAACTTAGAACTTCCCATTTCCAGGTGTCCCTTCAACCTCTTCAAGAGGACTTTAATACTAACTCTAGAGTTGGGAGTGATATTTGATGGCTGATTGTGTTTGAACAATTCAATGATAGATTTAAGGATAATTTTTGTTTAACAGCTTTTGGCGTTTCACATAGATACTGCCAAATGGATTGTAAAGCAAGTTGAAACGAAGTAATTTCCTTGAAGTTGAAATATGCTGCACAAGAGATTGAGTATTGAATGGTATAACATTGATAAAGTCAACTACTTGTTTCTGTGCATTTGCATGTGAAAATAAAAGGAAAAAAAATCCAAAACGATGATTTGCCAATTGGCAACTCCTGTTTTTAAATTACATTGTCTTTCATATTGTCAAATGAGCCGATGATTATCTAATCATAATCATTTTGGTTAATACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTTGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAGTGGAAACACATCAAACGGGGGTGGTGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAGCAAGTGTCAAGAAAAAAAAGAAAAGAAAAGAAAAAGAAGAATTCTTCTTTTCCCATGGAACGGTTGACGTTTTCAACTTAACTTTGCTCTAATGCTGTTTAAACCCTGTACATCTTACAATCTTGCCAAACAGATGAATTTGTGGCTGGGGTTTTTTTTTTTTTTTTTTTTCAGTGCAGTTTCTGCAGCTTTTGCTTCGAGAATTGCTCACTTTTCTGTTAACAAAGCTTTTGTGAATGATTATGACCGATGTTTGAGTTTGTGATGATTTTGTAAGATG

mRNA sequence

ATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGCGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGATAGGATCGAGGCTACCATTGTGATTATCCCAGAAAGCCTCGCCTCTGCTGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGAGACAAGGGAGGGTTCGAATCTGAACCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGGGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTGTGAAGAACAATGGAATGGGGTTGGGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTAAAGCCAAAAGGGGGTAAAGGGTTTATTGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCGTCCAATCAAACCTCAGAGGCTAAAACTGGGACCAGTACTTCAGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTTGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAGTGGAAACACATCAAACGGGGGTGGTGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAG

Coding sequence (CDS)

ATGGATCGCGAAGAAAGGAATCGCCAAGATGGTGGTGATGTGTCGAGTCGAGTAGAAACAGCGGTGCCTAAACCCACAAATGATTTGGTTAATGGCGATAGGATCGAGGCTACCATTGTGATTATCCCAGAAAGCCTCGCCTCTGCTGGCGGCGACAAGGAAGCTCACGGCTTCGGTGGAGAAGCTATACCAAATGTTAATATAGAGACAAGGGAGGGTTCGAATCTGAACCCTTCAGAAACTGTACTGGTTATTGATTCGGATGGGGCTGCATCTAGAGGTGAAGACGGAGAATCGCTTGTGAAGAACAATGGAATGGGGTTGGGGAAGGATTTGGAAAAGTTGAATGTAAAATCAAAGATGTCAGAAGCGAAGGACAATCCGATGTTGATAAATGTAAAGCCAAAAGGGGGTAAAGGGTTTATTGATGACTGGAATGGAGAAAGGGTCTGTAGGATCTGCCATTTGGCGTCCAATCAAACCTCAGAGGCTAAAACTGGGACCAGTACTTCAGAATTGATTCAACTTGGTTGTGACTGCAAAGATGAGCTGGGAATTGCGCATGGTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGAATGTGCGAAATTTGTGGTGAGACTGCTAAAAACGTTGAAGGAGTTGGGGACAACAGATTTATGGAAGAGTGGAACGAGGGGAGATCAGTAGACAGCAGTGGAAACACATCAAACGGGGGTGGTGGATGTTGGAGGGGACAGCCATTCTGTAACTTTTTGATGGCATGTCTGGTAATAGCTTTTGTTCTTCCATGGTTTTTTCGTATAAACATTTTCTAG

Protein sequence

MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGGEAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF*
BLAST of Csa6G519670 vs. TrEMBL
Match: A0A0A0KHW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519670 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 1.9e-159
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1

Query: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60
           MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG
Sbjct: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60

Query: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK 120
           EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK
Sbjct: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC 180
           MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC
Sbjct: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 240
           KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN
Sbjct: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 240

Query: 241 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
           GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274

BLAST of Csa6G519670 vs. TrEMBL
Match: A0A061GDI8_THECC (RING/FYVE/PHD zinc finger superfamily protein, putative OS=Theobroma cacao GN=TCM_029667 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-62
Identity = 126/249 (50.60%), Postives = 167/249 (67.07%), Query Frame = 1

Query: 40  VIIPESLASAGG---DKEAHGFGGEAIPNVNIETREGSNLNPS------ETVLVIDSDGA 99
           V+  E L  AGG   D+E +  GG       ++     +LN S      ET++V+++  A
Sbjct: 116 VVSTEVLGEAGGEMFDQETNQMGGVGETTGQVDQGSSRSLNNSVDRFVVETIIVVNTQEA 175

Query: 100 ASRGEDGESLVKNNGMGLGKDLEKLNVKSKMSEAKDNPML-INVKPKGGKGFIDDWNGER 159
                     VK+NG+G  K + +   K+K++EA+D+ ++ I     GG+ + + W+GER
Sbjct: 176 TCVDGSNRLEVKDNGLGSSKVMTE-RPKTKVAEAEDSCVIDIKGSDGGGRQYKESWDGER 235

Query: 160 VCRICHLASNQTSEAKTGT----STSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCE 219
           VCRICHL + Q+ E+   T    +T +LIQLGC CKDELGIAH HCAEAWFKLKGNRMCE
Sbjct: 236 VCRICHLTTEQSLESTDITFSTAATMDLIQLGCGCKDELGIAHSHCAEAWFKLKGNRMCE 295

Query: 220 ICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVL 275
           ICG+TAKN+ GV DNRF+E+W++  S    G +S+ GGGCWRGQPFCNFLMACLVIAFVL
Sbjct: 296 ICGQTAKNITGVRDNRFIEDWHDQGSTSGGGISSDRGGGCWRGQPFCNFLMACLVIAFVL 355

BLAST of Csa6G519670 vs. TrEMBL
Match: M5WUB0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009296mg PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-61
Identity = 139/299 (46.49%), Postives = 181/299 (60.54%), Query Frame = 1

Query: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVI-IPESLASAGGDKEAHGFG 60
           MD    + Q   +V   V+    + + + V    +E  IVI   E+L    G K+A   G
Sbjct: 1   MDSGAHDLQGSSEVLGAVDQKTIEKSRNSVVWSVVETVIVIESEEALGKELGSKKAVVEG 60

Query: 61  GEAIPN-----------VNIETREGSNLNP--------SETVLVIDSDGAAS-RGEDGES 120
            E + +           V  E  +G+N N         SET++VI+SD AA   G++G  
Sbjct: 61  LEKLNDKEACDQPGSGVVPSEVEQGNNKNSNNLADGNVSETLVVINSDEAARVTGDNGRL 120

Query: 121 LVKNNGMGLGKDLEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASN 180
           + K + +G  K +     K K+ +A+ +  +I+V+   GKGF D W+ ERVCRICHL+S 
Sbjct: 121 VTKVDELGSSK-VSVEESKKKVPQAERDSHVIDVRCGSGKGFGDKWDVERVCRICHLSSE 180

Query: 181 QTSEAKTGTSTS----ELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVE 240
           Q+ + K  T+ S    ELI LGC+C+DELG+AHGHCAEAWFKLKGNR CEICGETA NV 
Sbjct: 181 QSPDRKIETANSSTPTELIHLGCECRDELGVAHGHCAEAWFKLKGNRTCEICGETANNVT 240

Query: 241 GVGDNRFMEEWNEGRSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
           G GD+RFMEEWNE        N+ +  GGCWRGQPFCNFLMACLVIAFVLPWFFR+ +F
Sbjct: 241 GHGDSRFMEEWNEETLSGIENNSLDRNGGCWRGQPFCNFLMACLVIAFVLPWFFRVKMF 298

BLAST of Csa6G519670 vs. TrEMBL
Match: F6HMA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g01500 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-61
Identity = 123/225 (54.67%), Postives = 155/225 (68.89%), Query Frame = 1

Query: 60  GEAIPNVNIETREGSNLNP-SETVLVI---DSDGAASRGEDGESLVKNNGMGLGKDLEKL 119
           G+ +  V    RE S+  P  ETV++I   + D    RG  G S    +     +   + 
Sbjct: 12  GDKVDRVEGGIRESSSAEPVPETVIMITPAEPDAEERRGSSGGS---GSDKAKAEAEAEA 71

Query: 120 NVKSKMSEAKDNPMLINVK---PKGGKGFIDDWNGERVCRICHLASNQTSEAKTGT---S 179
             +SK S  + N  +++VK     GG G +++W+GERVCRICHL+S+  +E    T   +
Sbjct: 72  ETESKASVKEVNSCVVDVKCGGGGGGGGLVENWDGERVCRICHLSSDPAAEGSIATCRDA 131

Query: 180 TSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEG 239
           +++LIQLGC CKDELGI+H HCAEAWFKLKGNRMCEICGETA NV+GV DNRFME+WNE 
Sbjct: 132 SADLIQLGCGCKDELGISHPHCAEAWFKLKGNRMCEICGETANNVKGVWDNRFMEDWNER 191

Query: 240 RSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
           R   SS N+S+ GGGCWRGQPFCNFLMACLVIAFVLPWFFR+N+F
Sbjct: 192 RYAGSSSNSSDRGGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 233

BLAST of Csa6G519670 vs. TrEMBL
Match: W9RP22_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005813 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.1e-60
Identity = 125/283 (44.17%), Postives = 172/283 (60.78%), Query Frame = 1

Query: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60
           MD EE + Q   +V SR +    + ++D V+G  +E    +  E  A    + +     G
Sbjct: 1   MDEEEHDPQSSNEVLSRDDRRAKENSSDFVDGSAVETITAVKKEERACHSEENKDLELRG 60

Query: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNV--- 120
             + + N    +G+  NP+ + + +  + +         LV  +   L   +++L +   
Sbjct: 61  CELGSTN-GVEQGTIANPTNSGVRVVVEASVVISPSEAPLVSGDNRVLNAKVDELGLSIM 120

Query: 121 -----KSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGT-STS 180
                KSKMSE++    +I++     K   D W+GER+CRICHL+S+Q+ + +T T S +
Sbjct: 121 SVEESKSKMSESEKQSCVIDISCGSAKSCGDKWDGERICRICHLSSDQSPDRRTTTTSVA 180

Query: 181 ELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRS 240
           +LI LGC CKD+L IAH  CAEAWFK+KGNRMCEICGETAKN+ GVGD RFMEEWNE R 
Sbjct: 181 DLIHLGCGCKDDLSIAHYQCAEAWFKVKGNRMCEICGETAKNITGVGDIRFMEEWNE-RF 240

Query: 241 VDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
             S   +S   GGCWRGQPFCNFLMACLV+AFVLPWFFR+N+F
Sbjct: 241 TRSGSMSSERSGGCWRGQPFCNFLMACLVVAFVLPWFFRVNMF 281

BLAST of Csa6G519670 vs. TAIR10
Match: AT2G34200.1 (AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27
Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 1

Query: 147 GERVCRICHLASNQTSEAKTGTST--SELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMC 206
           GER+CRICH  S+Q+ EA     +   ELI++GC CK+ELG+AH HCAEAWFKL+GN +C
Sbjct: 98  GERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVC 157

Query: 207 EICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFV 266
           EICG TAKNV      R ME+W+  R      NT +G     RGQ  C F++  L I  +
Sbjct: 158 EICGCTAKNV----TVRLMEDWSGERD-----NTLDGRRRRGRGQSCCIFMVFLLTI-LL 213

Query: 267 LPWFFR 271
           L WFF+
Sbjct: 218 LHWFFK 213

BLAST of Csa6G519670 vs. TAIR10
Match: AT5G05830.1 (AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-27
Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 1

Query: 91  ASRGEDGESLVKNNGMGLGKDLEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERV 150
           +S G DG+   + +   + K+ E +  + + S A    + I+++    +  +     ER 
Sbjct: 19  SSSGCDGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERD 78

Query: 151 CRICHLASNQTSEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGET 210
           CRICH+ S   +  ++G      I+LGC CK +L  AH HCAE WFK+KGN++CE+CG  
Sbjct: 79  CRICHM-SLDAANLESGVP----IELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSI 138

Query: 211 AKNVEGVGDNRFMEEWNEGRSVD-----SSGNTSNGGGGCWRGQPFCNFLMACLVIAFVL 270
           A NV G  +    E  NE   V+     +SG     G   W+G  F NFL+AC+V AFV+
Sbjct: 139 AGNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFVI 198

Query: 271 PWFFRINI 274
            W F  N+
Sbjct: 199 SWLFHFNV 201

BLAST of Csa6G519670 vs. TAIR10
Match: AT5G59000.1 (AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 55/153 (35.95%), Postives = 65/153 (42.48%), Query Frame = 1

Query: 147 GERVCRICHLASNQTSEAKTGTSTSE--------------------------LIQLGCDC 206
           G R CRICHL      EA+      E                           +QLGC C
Sbjct: 77  GGRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSC 136

Query: 207 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 266
           K +LG+AH  CAE WFK+KGN  CEICG  A NV G   N         ++      T  
Sbjct: 137 KGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSNPESTASTHSQAAAGQSLTQT 196

Query: 267 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINI 274
              G W G+P  NFL+A +V AFV+ W F   +
Sbjct: 197 EPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

BLAST of Csa6G519670 vs. TAIR10
Match: AT2G37950.1 (AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 51/133 (38.35%), Postives = 68/133 (51.13%), Query Frame = 1

Query: 148 ERVCRICHLASNQTSEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEIC 207
           E+ CRICHL           TS    I+LGC CKD+L +AH  CAE WFK+KG++ CEIC
Sbjct: 81  EKDCRICHLGVE--------TSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEIC 140

Query: 208 GETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSNGGGG-------CWRGQPFCNFLMACLV 267
              A+NV G   N  +    E R + +   T+ G GG        W+ Q   N ++AC+V
Sbjct: 141 QSVARNVGGA--NEMVGSTMEERELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMV 200

Query: 268 IAFVLPWFFRINI 274
             F + W F  ++
Sbjct: 201 FGFFISWIFHFHV 203

BLAST of Csa6G519670 vs. TAIR10
Match: AT5G01070.2 (AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 3.2e-20
Identity = 55/134 (41.04%), Postives = 71/134 (52.99%), Query Frame = 1

Query: 148 ERVCRICHLASNQTSEAKTGTSTSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEIC 207
           E+ CRICHL   ++S  + G    + + LGC CKD+LG  H  CA+ WFK+KGN+ CEIC
Sbjct: 75  EKDCRICHLGL-ESSRHECG----DPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEIC 134

Query: 208 GETAKNVEGVGDNRFMEEWNEGRSVD-SSGNT-------SNGGGGCWRGQPFCNFLMACL 267
              A+N   V DN   +   E    D  +GNT        +      RG  F NFL+ C+
Sbjct: 135 RSIAQNFFKV-DNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCM 194

Query: 268 VIAFVLPWFFRINI 274
           V AFV+ WFF  N+
Sbjct: 195 VCAFVISWFFHFNL 202

BLAST of Csa6G519670 vs. NCBI nr
Match: gi|778721140|ref|XP_011658254.1| (PREDICTED: uncharacterized protein LOC105435966 [Cucumis sativus])

HSP 1 Score: 569.7 bits (1467), Expect = 2.8e-159
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1

Query: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60
           MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG
Sbjct: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60

Query: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK 120
           EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK
Sbjct: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC 180
           MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC
Sbjct: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 240
           KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN
Sbjct: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 240

Query: 241 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
           GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274

BLAST of Csa6G519670 vs. NCBI nr
Match: gi|659078443|ref|XP_008439727.1| (PREDICTED: uncharacterized protein LOC103484442 [Cucumis melo])

HSP 1 Score: 544.7 bits (1402), Expect = 9.5e-152
Identity = 262/274 (95.62%), Postives = 266/274 (97.08%), Query Frame = 1

Query: 1   MDREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGG 60
           MDREERNRQDGGDVSSRVET VPKPTNDLVNGDRIEATIVIIPES ASA GDKEAHGFGG
Sbjct: 1   MDREERNRQDGGDVSSRVETVVPKPTNDLVNGDRIEATIVIIPESAASACGDKEAHGFGG 60

Query: 61  EAIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSK 120
           EAIPNVNI+TREGSNLNPSETVLVIDSDGAASRGEDGESL+KN+ MGL KDLEKLNVKSK
Sbjct: 61  EAIPNVNIDTREGSNLNPSETVLVIDSDGAASRGEDGESLMKNSEMGLRKDLEKLNVKSK 120

Query: 121 MSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTSTSELIQLGCDC 180
           MSE KDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQ SEAKTGTSTSELIQLGCDC
Sbjct: 121 MSETKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQASEAKTGTSTSELIQLGCDC 180

Query: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSN 240
           KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDS+GNTSN
Sbjct: 181 KDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSNGNTSN 240

Query: 241 GGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
            GGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF
Sbjct: 241 RGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 274

BLAST of Csa6G519670 vs. NCBI nr
Match: gi|470115560|ref|XP_004293966.1| (PREDICTED: uncharacterized protein LOC101301561 [Fragaria vesca subsp. vesca])

HSP 1 Score: 249.6 bits (636), Expect = 6.3e-63
Identity = 132/277 (47.65%), Postives = 170/277 (61.37%), Query Frame = 1

Query: 2   DREERNRQDGGDVSSRVETAVPKPTNDLVNGDRIEATIVIIPESLASAGGDKEAHGFGGE 61
           D+E   +++  DVS   E    K +++L NG+   + +VI     + A GD    G  G+
Sbjct: 75  DKEACEQRNSSDVSGHAELGTSKNSSNLANGNVSGSVVVIDSGEASRATGDDGRLGVEGD 134

Query: 62  AIPNVNIETREGSNLNPSETVLVIDSDGAASRGEDGESLVKNNGMGLGKDLEKLNVKSKM 121
            + +  ++  +         + VI+              +K + MG  K  E    K K+
Sbjct: 135 ELGSNKVDEPKMKVPEKESDLHVIN--------------IKCDEMGSSKVEES---KMKV 194

Query: 122 SEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEAKTGTST----SELIQLG 181
            EA+ +  +IN+K    KGF D+W GE VCRICHL+S+Q+ + KT +S+     +LI LG
Sbjct: 195 PEAERDSHVINIKCGSRKGFGDNWEGESVCRICHLSSDQSPDRKTESSSYSVSMDLIHLG 254

Query: 182 CDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDNRFMEEWNEGRSVDSSGN 241
           C CKDELGIAH HCAEAWFKLKGNRMCEICGE AKNV G+GDNRF+EEWNE R      N
Sbjct: 255 CGCKDELGIAHAHCAEAWFKLKGNRMCEICGENAKNVTGLGDNRFLEEWNERRFSGLGAN 314

Query: 242 TSNGGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
           TS    GCWRGQPFCNFLMACLVIAFVLPWFFR+N+F
Sbjct: 315 TSERNVGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 334

BLAST of Csa6G519670 vs. NCBI nr
Match: gi|590623497|ref|XP_007025338.1| (RING/FYVE/PHD zinc finger superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 248.1 bits (632), Expect = 1.8e-62
Identity = 126/249 (50.60%), Postives = 167/249 (67.07%), Query Frame = 1

Query: 40  VIIPESLASAGG---DKEAHGFGGEAIPNVNIETREGSNLNPS------ETVLVIDSDGA 99
           V+  E L  AGG   D+E +  GG       ++     +LN S      ET++V+++  A
Sbjct: 116 VVSTEVLGEAGGEMFDQETNQMGGVGETTGQVDQGSSRSLNNSVDRFVVETIIVVNTQEA 175

Query: 100 ASRGEDGESLVKNNGMGLGKDLEKLNVKSKMSEAKDNPML-INVKPKGGKGFIDDWNGER 159
                     VK+NG+G  K + +   K+K++EA+D+ ++ I     GG+ + + W+GER
Sbjct: 176 TCVDGSNRLEVKDNGLGSSKVMTE-RPKTKVAEAEDSCVIDIKGSDGGGRQYKESWDGER 235

Query: 160 VCRICHLASNQTSEAKTGT----STSELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCE 219
           VCRICHL + Q+ E+   T    +T +LIQLGC CKDELGIAH HCAEAWFKLKGNRMCE
Sbjct: 236 VCRICHLTTEQSLESTDITFSTAATMDLIQLGCGCKDELGIAHSHCAEAWFKLKGNRMCE 295

Query: 220 ICGETAKNVEGVGDNRFMEEWNEGRSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVL 275
           ICG+TAKN+ GV DNRF+E+W++  S    G +S+ GGGCWRGQPFCNFLMACLVIAFVL
Sbjct: 296 ICGQTAKNITGVRDNRFIEDWHDQGSTSGGGISSDRGGGCWRGQPFCNFLMACLVIAFVL 355

BLAST of Csa6G519670 vs. NCBI nr
Match: gi|645237675|ref|XP_008225316.1| (PREDICTED: uncharacterized protein LOC103324972 [Prunus mume])

HSP 1 Score: 247.3 bits (630), Expect = 3.1e-62
Identity = 129/234 (55.13%), Postives = 162/234 (69.23%), Query Frame = 1

Query: 52  DKEAHGFGGEAIPNVNIE---TREGSNL---NPSETVLVIDSDGAAS-RGEDGESLVKNN 111
           DKEA    G  +    +E    +  +NL   N SET++VI+SD AA   G++G  + K +
Sbjct: 78  DKEACDQPGSGVVPSEVEQGNNKNSNNLADGNVSETLVVINSDEAARVTGDNGRLVTKVD 137

Query: 112 GMGLGKDLEKLNVKSKMSEAKDNPMLINVKPKGGKGFIDDWNGERVCRICHLASNQTSEA 171
            +G  K L + + K  + +A+ +  +I+V+   GKGF D W+GERVCRICHL+S Q+ + 
Sbjct: 138 ELGSSKVLVEES-KKMVPQAEKDSHVIDVRCGSGKGFGDKWDGERVCRICHLSSEQSPDR 197

Query: 172 KTGTSTS----ELIQLGCDCKDELGIAHGHCAEAWFKLKGNRMCEICGETAKNVEGVGDN 231
           K  T+ S    ELI LGC+C+DELG+AHGHCAEAWFKLKGNR CEICGETA NV G GD+
Sbjct: 198 KIETANSSTPTELIHLGCECRDELGVAHGHCAEAWFKLKGNRTCEICGETANNVTGHGDS 257

Query: 232 RFMEEWNEGRSVDSSGNTSNGGGGCWRGQPFCNFLMACLVIAFVLPWFFRINIF 275
           RFMEEWNE        N+S+  GGCWRGQPFCNFLMACLVIAFVLPWFFR N+F
Sbjct: 258 RFMEEWNEETLSGIENNSSDRNGGCWRGQPFCNFLMACLVIAFVLPWFFRGNMF 310

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KHW6_CUCSA1.9e-159100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519670 PE=4 SV=1[more]
A0A061GDI8_THECC1.3e-6250.60RING/FYVE/PHD zinc finger superfamily protein, putative OS=Theobroma cacao GN=TC... [more]
M5WUB0_PRUPE1.9e-6146.49Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009296mg PE=4 SV=1[more]
F6HMA8_VITVI2.4e-6154.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g01500 PE=4 SV=... [more]
W9RP22_9ROSA2.1e-6044.17Uncharacterized protein OS=Morus notabilis GN=L484_005813 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G34200.12.0e-2750.79 RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G05830.14.6e-2735.64 RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G59000.11.5e-2235.95 RING/FYVE/PHD zinc finger superfamily protein[more]
AT2G37950.11.7e-2138.35 RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G01070.23.2e-2041.04 RING/FYVE/PHD zinc finger superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778721140|ref|XP_011658254.1|2.8e-159100.00PREDICTED: uncharacterized protein LOC105435966 [Cucumis sativus][more]
gi|659078443|ref|XP_008439727.1|9.5e-15295.62PREDICTED: uncharacterized protein LOC103484442 [Cucumis melo][more]
gi|470115560|ref|XP_004293966.1|6.3e-6347.65PREDICTED: uncharacterized protein LOC101301561 [Fragaria vesca subsp. vesca][more]
gi|590623497|ref|XP_007025338.1|1.8e-6250.60RING/FYVE/PHD zinc finger superfamily protein, putative [Theobroma cacao][more]
gi|645237675|ref|XP_008225316.1|3.1e-6255.13PREDICTED: uncharacterized protein LOC103324972 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0001510 RNA methylation
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016020 membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003735 structural constituent of ribosome
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU096048cucumber EST collection version 3.0transcribed_cluster
CU101998cucumber EST collection version 3.0transcribed_cluster
CU128079cucumber EST collection version 3.0transcribed_cluster
CU129847cucumber EST collection version 3.0transcribed_cluster
CU156918cucumber EST collection version 3.0transcribed_cluster
CU158426cucumber EST collection version 3.0transcribed_cluster
CU161978cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G519670.1Csa6G519670.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU161978CU161978transcribed_cluster
CU129847CU129847transcribed_cluster
CU128079CU128079transcribed_cluster
CU101998CU101998transcribed_cluster
CU096048CU096048transcribed_cluster
CU156918CU156918transcribed_cluster
CU158426CU158426transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 151..207
score: 7.
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 150..208
score: 2.0
IPR011016Zinc finger, RING-CH-typePROFILEPS51292ZF_RING_CHcoord: 143..214
score: 17
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 147..210
score: 2.2
NoneNo IPR availablePANTHERPTHR23012:SF76SUBFAMILY NOT NAMEDcoord: 74..274
score: 8.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 147..210
score: 3.3

The following gene(s) are paralogous to this gene:

None