Csa6G502680 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G502680
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionADP-ribosylation factor; contains IPR003579 (Small GTPase superfamily, Rab type), IPR005225 (Small GTP-binding protein domain), IPR006689 (Small GTPase superfamily, ARF/SAR type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr6 : 25329589 .. 25332256 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAATACAAATTTTTACAAAGAGGTAAAATTCCCAATTTCCGACGAGAAGCTTCCGCCCAATTTCTCACTGGACTCGCGCTCAAATCTCTCTCTGTAGTCGTCATTTGGTTGGCTTCTCTCTCGATCGATCCTCCTTACTTCTCAACTTTACCTCACTCTCCCGCGTCAAGGTTTGTTCGTCTCTCATTGTTTCTGTAACGTTTTTTCTTCCACATATCTATTTACTGGGCTTAGGTTTTAGGAACCCGGTTGAGAATCTGAGTTATCTCTAAAAGCAAAGAAAATAACACCCAAAAAAAGTTCTAAACCATTTCAATCCCTGTGTTGTTTATTAGAAAGACGAGGAAATTGCTACTGAATTCGGTGAACTGCTTAGAAGATTTGCAGTGCGGAGTTGGCGTAGATAATGGGGTTGCTTAGTATCATTCGAAAAATCAAAAGGAAAGAGAAGGAAATGCGTATACTTATGGTGTATGTCAATCTCTCTCCCTCTATCTCTATCTGTTTCCTCCCCAGTTTACTTCTCTGCTTCTTATCCAGTTGGATCCATTGTTGATTGACATTCAGAGGCCTTGACAACTCTGGGAAAACTACCATCGTTTTAAAAATCAATGGGGAAGATACCAGCGTTATCAGCCCTACGCTTGGATTTAATATCAAGACTATCATCTATCACAAGTGAGCTTCCATGCTTGTTCTTGTTACCATGCTTGCAATTCATTATTTTTTCTGGATTGAAATTTTCTTGTTAAAGTTTTGAGATTTGGTATGCACCCTGTTCACTCTTTACTTGCTAATTTTCCCCCACAAATAAATGGCAATGAACCGTGAATAATATGGCCCATTTTGCATTTTTTTATGAGAGTTTTTGATTATGACGCAGAAGAGATCTTCTCTCCGTCAATGCATAAGCTATTTTCAACCGATTCTTTGTTCTAAAAACTTGATCGGCTACTCCTGATTCTATATTTTTGTTGTGCTTGTGGGAAATATTTATAGTGCGAATATTTGAACTTTGATGCACATTTGACATGCAGTTAACAAATTACTATGGCAGGTACACACTTAACATATGGGATGTTGGGGGCCAAAAGACTATAAGATCATGTTGGAGGAACTATTTTGAGCAGAGGGATGGACTAGTATGGGTGGTTGACAGTTCTGATCTTAGAAGATTGGATGATTGCAAGTCGGAACTTGATAATCTTTTGAAAGAAGAGGTTAGAAATAGAAGTCCCTGTTCCTTAATTGACAGGTTTACTATGTAATAACAATGTGATTTTCTCTGTATATGATGTAGGCTCAATCTTTCTGTTTTCATTTTTCTGTATTTGCGAGATATTACTATCTATTATTGGTCAAAATTCATCATAGAACCGTAGGTGGTTTGACATTCTCATAAAGTCTTTAGTTATTCTGAAGTTCAAAGTTGTTAGTGATGCATTTATTGGCGACTCAGCCAAGTATATGAAATGCAAGCTTGATAAGTTGATATATGGTCCTAACTAGTTCAGAAATGTGTTTTGATGCTTTTAATCAGTATTTTTCTGTGGTGTCTCTACCTTTCCTTTTATCTATCGCAATGAGATTAGTTTCTCACTTAAAGAAAGAAGTATGTAAGTAATAACTGAAATGTAAGCACAGATGATATCAAAGGTTCTATAAAATTTTACATGGTAAAGAAAGAGATTACTAATTTTTTTGCTCATATTACAGAGACTTTCTGGAGCATCATTGCTTATTCTCGCCAATAAGCAGGACATAAAAGGAGCCCTTTCTCCAGAGGAAATTGCTAAGGTAAGAAGTTCCTCTTCTAAGCTTTAAATTCAATTTCGCTCCAATGGGATCTTTGCTGAAGATTTAACTTGAAAACGTTGCTTGTTAGTCCCTCCCGATCAAGTTCTTTCCATCCTTTGCATAATGGCAGTTGGCTAACCACCTCACGAGATATTATTTTAGAAAAGTCGTGCATAAATCCAAGGTTGCACAGCATCTGTAGAGTTAGACTAGTATATTCCGGAAATTTTAAAGTAATTACTTGATCTTAAACACAAATTTTCACACTTTCTGCTAAATATCCATCACATTTAGAGAATAATTATACATCACACTTAGAGAAAATAATTATACATCACATTTAGAGCAAATTCTGTAAGGAAAATTTCATAGCCCTTATCACAAATTATAGTTAAAAGGCGAAGGGTTTCATTCAAGTTCTTGTGACTTTTAGAATCAAACATCATGTTAAGTCATCCTGTTGTATGCTATTACTATTAACTTGAGGTTTAGATGTGGGGTTCTTAAATAAATGCTTTCCAATGCATAAAGTGAACTAATGCTTAACTACCTACGTATTTGTTCATCTCTTACTCTTCAGGTATTGAATTTGGAAGCCATGGACAAAACACGGCATTGGAAAATTGTTGGTTGTAGTGCATACACCGGCGAGGGGCTGTTGGAAGGCTTTGATTGGTTGGTCCAAGACGTTGCTTCCCGAATTTATGTGTTAGATTAATATCTTTTCAATTTTGTATCTTGCCATATGAAAACTGATCCAAGATTTTGTCGAATATATGTGGGTTTGTTCATTTATGTTGAATGCTCATTTTTTTTAAGGGTGTTTTTAATCGTTAAAAATATATATGCACTCATTTCACATTGTT

mRNA sequence

ATGGGGTTGCTTAGTATCATTCGAAAAATCAAAAGGAAAGAGAAGGAAATGCGTATACTTATGGTAGGCCTTGACAACTCTGGGAAAACTACCATCGTTTTAAAAATCAATGGGGAAGATACCAGCGTTATCAGCCCTACGCTTGGATTTAATATCAAGACTATCATCTATCACAAGTACACACTTAACATATGGGATGTTGGGGGCCAAAAGACTATAAGATCATGTTGGAGGAACTATTTTGAGCAGAGGGATGGACTAGTATGGGTGGTTGACAGTTCTGATCTTAGAAGATTGGATGATTGCAAGTCGGAACTTGATAATCTTTTGAAAGAAGAGAGACTTTCTGGAGCATCATTGCTTATTCTCGCCAATAAGCAGGACATAAAAGGAGCCCTTTCTCCAGAGGAAATTGCTAAGGTATTGAATTTGGAAGCCATGGACAAAACACGGCATTGGAAAATTGTTGGTTGTAGTGCATACACCGGCGAGGGGCTGTTGGAAGGCTTTGATTGGTTGGTCCAAGACGTTGCTTCCCGAATTTATGTGTTAGATTAA

Coding sequence (CDS)

ATGGGGTTGCTTAGTATCATTCGAAAAATCAAAAGGAAAGAGAAGGAAATGCGTATACTTATGGTAGGCCTTGACAACTCTGGGAAAACTACCATCGTTTTAAAAATCAATGGGGAAGATACCAGCGTTATCAGCCCTACGCTTGGATTTAATATCAAGACTATCATCTATCACAAGTACACACTTAACATATGGGATGTTGGGGGCCAAAAGACTATAAGATCATGTTGGAGGAACTATTTTGAGCAGAGGGATGGACTAGTATGGGTGGTTGACAGTTCTGATCTTAGAAGATTGGATGATTGCAAGTCGGAACTTGATAATCTTTTGAAAGAAGAGAGACTTTCTGGAGCATCATTGCTTATTCTCGCCAATAAGCAGGACATAAAAGGAGCCCTTTCTCCAGAGGAAATTGCTAAGGTATTGAATTTGGAAGCCATGGACAAAACACGGCATTGGAAAATTGTTGGTTGTAGTGCATACACCGGCGAGGGGCTGTTGGAAGGCTTTGATTGGTTGGTCCAAGACGTTGCTTCCCGAATTTATGTGTTAGATTAA

Protein sequence

MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKYTLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASLLILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASRIYVLD*
Homology
[Close]
BLAST of Csa6G502680 vs. Swiss-Prot
Match: ARF5_ARATH (ADP-ribosylation factor-like protein 2 OS=Arabidopsis thaliana GN=ARL2 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-94
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIK+KEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIY KY
Sbjct: 1   MGLLSIIRKIKKKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERL+G+SL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDI+GAL+P+EI KVLNLE+MDK+RHWKIVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

[Close]
BLAST of Csa6G502680 vs. Swiss-Prot
Match: ARL2_DICDI (ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum GN=arl2 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.5e-68
Identity = 117/185 (63.24%), Postives = 155/185 (83.78%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLL++++K+K+KEKE+RILM+GLDN+GKTTI+ K NGED S ISPTLGFNI+T++Y +Y
Sbjct: 1   MGLLTVLKKLKQKEKELRILMLGLDNAGKTTILKKFNGEDISTISPTLGFNIQTLMYKEY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
            LNIWD+GGQKT+RS WRNY+E+ D ++WV+DSSD+RR+DDCK EL  LL+EE+ +GAS 
Sbjct: 61  KLNIWDIGGQKTLRSYWRNYYEENDAVIWVIDSSDIRRIDDCKFELKKLLEEEKFAGASF 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           L+ ANKQD+ GA++ EEI+K L+LE ++ T HW+I+ CSA TG GL EG DW+V+D+ SR
Sbjct: 121 LVFANKQDLDGAMTSEEISKYLDLEQLN-THHWEIMSCSAVTGLGLEEGIDWVVKDIVSR 180

Query: 181 IYVLD 186
            +VLD
Sbjct: 181 CFVLD 184

[Close]
BLAST of Csa6G502680 vs. Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.9e-64
Identity = 115/185 (62.16%), Postives = 148/185 (80.00%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLL+I++K+K+KE+E+R+LM+GLDN+GKTTI+ K NGED   ISPTLGFNIKT+ +  +
Sbjct: 1   MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGF 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
            LNIWDVGGQK++RS WRNYFE  DGL+WVVDS+D +R+ DC+ EL NLL EERL+GA+L
Sbjct: 61  KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LI ANKQD+ GALS   I + L L+++ ++ HW I GCSA TGE LL G DWL+ D++SR
Sbjct: 121 LIFANKQDLPGALSSNAIREALELDSI-RSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 180

Query: 181 IYVLD 186
           I++ D
Sbjct: 181 IFMAD 184

[Close]
BLAST of Csa6G502680 vs. Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 245.0 bits (624), Expect = 6.6e-64
Identity = 115/185 (62.16%), Postives = 148/185 (80.00%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLL+I++K+K+KE+E+R+LM+GLDN+GKTTI+ K NGED   ISPTLGFNIKT+ +  +
Sbjct: 1   MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGF 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
            LNIWDVGGQK++RS WRNYFE  DGL+WVVDS+D +R+ DC+ EL +LL EERL+GA+L
Sbjct: 61  KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LI ANKQD+ GALS   I +VL L+++ ++ HW I GCSA TGE LL G DWL+ D++SR
Sbjct: 121 LIFANKQDLPGALSSNAIREVLELDSI-RSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 180

Query: 181 IYVLD 186
           I+  D
Sbjct: 181 IFTAD 184

[Close]
BLAST of Csa6G502680 vs. Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-63
Identity = 113/185 (61.08%), Postives = 148/185 (80.00%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLL+I++K+K+KE+E+R+LM+GLDN+GKTTI+ K NGED   ISPTLGFNIKT+ +  +
Sbjct: 1   MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGF 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
            LNIWDVGGQK++RS WRNYFE  DGL+WVVDS+D +R+ DC+ EL +LL EERL+GA+L
Sbjct: 61  KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LI ANKQD+ GALS   I + L L+++ ++ HW+I GCSA TGE LL G DWL+ D++SR
Sbjct: 121 LIFANKQDLPGALSCNAIQEALELDSI-RSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 180

Query: 181 IYVLD 186
           ++  D
Sbjct: 181 VFTAD 184

[Close]
BLAST of Csa6G502680 vs. TrEMBL
Match: A0A0A0KGG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502680 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 5.2e-100
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR
Sbjct: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180

Query: 181 IYVLD 186
           IYVLD
Sbjct: 181 IYVLD 185

[Close]
BLAST of Csa6G502680 vs. TrEMBL
Match: I1LHS7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G176300 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.3e-94
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI Y KY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKFELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGAL+PEEIAKVLNLEAMDK+RHW+IVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

[Close]
BLAST of Csa6G502680 vs. TrEMBL
Match: A0A0B2S9Y3_GLYSO (Putative ADP-ribosylation factor OS=Glycine soja GN=glysoja_003255 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.3e-94
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI Y KY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKFELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGAL+PEEIAKVLNLEAMDK+RHW+IVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

[Close]
BLAST of Csa6G502680 vs. TrEMBL
Match: A0A0L9URD7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g045300 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.3e-94
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI Y KY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIAYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKLELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGAL+PEEIAKVLNLEAMDK+RHW+IVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

[Close]
BLAST of Csa6G502680 vs. TrEMBL
Match: A0A0D2SNF8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G203200 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 7.3e-94
Identity = 175/185 (94.59%), Postives = 179/185 (96.76%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI Y KY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQ+TIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGAL+P EIAKVLNLE+MDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR
Sbjct: 121 LILANKQDIKGALTPAEIAKVLNLESMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

[Close]
BLAST of Csa6G502680 vs. TAIR10
Match: AT2G18390.1 (AT2G18390.1 ADP-ribosylation factor family protein)

HSP 1 Score: 347.1 bits (889), Expect = 7.0e-96
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIK+KEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIY KY
Sbjct: 1   MGLLSIIRKIKKKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERL+G+SL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDI+GAL+P+EI KVLNLE+MDK+RHWKIVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

[Close]
BLAST of Csa6G502680 vs. TAIR10
Match: AT5G14670.1 (AT5G14670.1 ADP-ribosylation factor A1B)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 77/168 (45.83%), Postives = 109/168 (64.88%), Query Frame = 1 

Query: 14  EKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKYTLNIWDVGGQKTI 73
           +KEMRILMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y   +  +WDVGGQ  I
Sbjct: 15  KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74

Query: 74  RSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASLLILANKQDIKGAL 133
           R  WR+YF+   GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+  A+
Sbjct: 75  RPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAM 134

Query: 134 SPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASRI 182
           +  EI   L L ++ + RHW I    A +GEGL EG DWL  ++A+++
Sbjct: 135 NAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIATKV 181

[Close]
BLAST of Csa6G502680 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 78/167 (46.71%), Postives = 108/167 (64.67%), Query Frame = 1 

Query: 14  EKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKYTLNIWDVGGQKTI 73
           +KEMRILMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y   +  +WDVGGQ  I
Sbjct: 15  KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74

Query: 74  RSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASLLILANKQDIKGAL 133
           R  WR+YF+   GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+  A+
Sbjct: 75  RPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAM 134

Query: 134 SPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 181
           +  EI   L L ++ + RHW I    A +GEGL EG DWL  ++AS+
Sbjct: 135 NAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

[Close]
BLAST of Csa6G502680 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 78/167 (46.71%), Postives = 108/167 (64.67%), Query Frame = 1 

Query: 14  EKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKYTLNIWDVGGQKTI 73
           +KEMRILMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y   +  +WDVGGQ  I
Sbjct: 15  KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74

Query: 74  RSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASLLILANKQDIKGAL 133
           R  WR+YF+   GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+  A+
Sbjct: 75  RPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAM 134

Query: 134 SPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 181
           +  EI   L L ++ + RHW I    A +GEGL EG DWL  ++AS+
Sbjct: 135 NAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

[Close]
BLAST of Csa6G502680 vs. TAIR10
Match: AT3G62290.1 (AT3G62290.1 ADP-ribosylation factor A1E)

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-39
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 1 

Query: 14  EKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKYTLNIWDVGGQKTI 73
           +KEMRILMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y   +  +WDVGGQ  I
Sbjct: 15  KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74

Query: 74  RSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASLLILANKQDIKGAL 133
           R  WR+YF+   GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+  A+
Sbjct: 75  RPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAM 134

Query: 134 SPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 181
           +  EI   L L ++ + RHW I    A +GEGL EG DWL  ++A++
Sbjct: 135 NAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

[Close]
BLAST of Csa6G502680 vs. NCBI nr
Match: gi|778719429|ref|XP_004143511.2| (PREDICTED: ADP-ribosylation factor-like protein 2 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 7.5e-100
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR
Sbjct: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180

Query: 181 IYVLD 186
           IYVLD
Sbjct: 181 IYVLD 185

[Close]
BLAST of Csa6G502680 vs. NCBI nr
Match: gi|659080285|ref|XP_008440710.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 1.3e-96
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI YHKY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYHKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGF+WLVQD+ASR
Sbjct: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFNWLVQDIASR 180

Query: 181 IYVLD 186
           IYVLD
Sbjct: 181 IYVLD 185

[Close]
BLAST of Csa6G502680 vs. NCBI nr
Match: gi|1009144644|ref|XP_015889914.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Ziziphus jujuba])

HSP 1 Score: 354.4 bits (908), Expect = 1.2e-94
Identity = 176/185 (95.14%), Postives = 180/185 (97.30%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIK+KEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI Y KY
Sbjct: 1   MGLLSIIRKIKKKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDC+ ELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCRMELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGAL+PEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALTPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IYVLD
Sbjct: 181 IYVLD 185

[Close]
BLAST of Csa6G502680 vs. NCBI nr
Match: gi|1011996748|ref|XP_015961841.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Arachis duranensis])

HSP 1 Score: 354.0 bits (907), Expect = 1.6e-94
Identity = 176/185 (95.14%), Postives = 180/185 (97.30%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI Y KY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGAL+PEEIAKVLNLEAMDK+RHWKIVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALTPEEIAKVLNLEAMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

[Close]
BLAST of Csa6G502680 vs. NCBI nr
Match: gi|1021470270|ref|XP_016188436.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Arachis ipaensis])

HSP 1 Score: 353.2 bits (905), Expect = 2.8e-94
Identity = 176/185 (95.14%), Postives = 179/185 (96.76%), Query Frame = 1 

Query: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60
           MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTI Y KY
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 61  TLNIWDVGGQKTIRSCWRNYFEQRDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120
           TLNIWDVGGQKTIRS WRNYFEQ DGLVWVVDSSDLRRLDDCK ELDNLLKEERLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASL 120

Query: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180
           LILANKQDIKGAL PEEIAKVLNLEAMDK+RHWKIVGCSAYTGEGLLEGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALMPEEIAKVLNLEAMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 181 IYVLD 186
           IY+LD
Sbjct: 181 IYMLD 185

The following BLAST results are available for this feature:
BLAST of Csa6G502680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARF5_ARATH1.2e-9491.89ADP-ribosylation factor-like protein 2 OS=Arabidopsis thaliana GN=ARL2 PE=2 SV=1[more]
ARL2_DICDI1.5e-6863.24ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum GN=arl2 PE=3 ... [more]
ARL2_BOVIN3.9e-6462.16ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=1 SV=1[more]
ARL2_HUMAN6.6e-6462.16ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4[more]
ARL2_MOUSE1.1e-6361.08ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1[more]
BLAST of Csa6G502680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGG8_CUCSA5.2e-100100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502680 PE=3 SV=1[more]
I1LHS7_SOYBN4.3e-9494.59Uncharacterized protein OS=Glycine max GN=GLYMA_01G176300 PE=3 SV=1[more]
A0A0B2S9Y3_GLYSO4.3e-9494.59Putative ADP-ribosylation factor OS=Glycine soja GN=glysoja_003255 PE=3 SV=1[more]
A0A0L9URD7_PHAAN4.3e-9494.59Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g045300 PE=3 SV=1[more]
A0A0D2SNF8_GOSRA7.3e-9494.59Uncharacterized protein OS=Gossypium raimondii GN=B456_007G203200 PE=3 SV=1[more]
BLAST of Csa6G502680 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18390.17.0e-9691.89 ADP-ribosylation factor family protein[more]
AT5G14670.11.2e-3945.83 ADP-ribosylation factor A1B[more]
AT2G47170.11.2e-3946.71 Ras-related small GTP-binding family protein[more]
AT1G10630.11.2e-3946.71 ADP-ribosylation factor A1F[more]
AT3G62290.12.7e-3946.11 ADP-ribosylation factor A1E[more]
BLAST of Csa6G502680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778719429|ref|XP_004143511.2|7.5e-100100.00PREDICTED: ADP-ribosylation factor-like protein 2 [Cucumis sativus][more]
gi|659080285|ref|XP_008440710.1|1.3e-9697.30PREDICTED: ADP-ribosylation factor-like protein 2 [Cucumis melo][more]
gi|1009144644|ref|XP_015889914.1|1.2e-9495.14PREDICTED: ADP-ribosylation factor-like protein 2 [Ziziphus jujuba][more]
gi|1011996748|ref|XP_015961841.1|1.6e-9495.14PREDICTED: ADP-ribosylation factor-like protein 2 [Arachis duranensis][more]
gi|1021470270|ref|XP_016188436.1|2.8e-9495.14PREDICTED: ADP-ribosylation factor-like protein 2 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009558 embryo sac cellularization
biological_process GO:0009960 endosperm development
biological_process GO:0006886 intracellular protein transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0007021 tubulin complex assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095228cucumber EST collection version 3.0transcribed_cluster
CU098168cucumber EST collection version 3.0transcribed_cluster
CU111659cucumber EST collection version 3.0transcribed_cluster
CU143438cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G502680.1Csa6G502680.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU098168CU098168transcribed_cluster
CU143438CU143438transcribed_cluster
CU111659CU111659transcribed_cluster
CU095228CU095228transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 15..151
score: 2.4
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 46..70
score: 6.7E-16coord: 73..98
score: 6.7E-16coord: 18..41
score: 6.7E-16coord: 151..175
score: 6.7
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 4..176
score: 7.4
IPR024156Small GTPase superfamily, ARF typePROFILEPS51417ARFcoord: 10..177
score: 21
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 4..176
score: 2.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..177
score: 1.75
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..181
score: 2.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 17..180
score: 0.
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..181
score: 1.8
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 3..177
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G502680MELO3C007829Melon (DHL92) v3.5.1cumeB503
Csa6G502680Lsi01G006740Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G502680MELO3C007829.2Melon (DHL92) v3.6.1cumedB483
Csa6G502680Bhi03G001003Wax gourdcuwgoB620
Csa6G502680CSPI06G31000Wild cucumber (PI 183967)cpicuB313
Csa6G502680Cucsa.127450Cucumber (Gy14) v1cgycuB175
Csa6G502680CmaCh07G004880Cucurbita maxima (Rimu)cmacuB877
Csa6G502680CmoCh07G004860Cucurbita moschata (Rifu)cmocuB865
Csa6G502680Cp4.1LG19g09200Cucurbita pepo (Zucchini)cpecuB503
Csa6G502680CsGy6G030530Cucumber (Gy14) v2cgybcuB281
Csa6G502680Carg16046Silver-seed gourdcarcuB0776
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G502680Watermelon (97103) v2cuwmbB412
Csa6G502680Watermelon (97103) v2cuwmbB464
Csa6G502680Watermelon (97103) v2cuwmbB481
Csa6G502680Watermelon (97103) v2cuwmbB503
Csa6G502680Cucumber (Chinese Long) v2cucuB065
Csa6G502680Cucumber (Chinese Long) v2cucuB112
Csa6G502680Cucumber (Chinese Long) v2cucuB146
Csa6G502680Cucumber (Gy14) v1cgycuB484
Csa6G502680Cucurbita maxima (Rimu)cmacuB345
Csa6G502680Cucurbita maxima (Rimu)cmacuB484
Csa6G502680Cucurbita maxima (Rimu)cmacuB681
Csa6G502680Cucurbita moschata (Rifu)cmocuB181
Csa6G502680Cucurbita moschata (Rifu)cmocuB334
Csa6G502680Cucurbita moschata (Rifu)cmocuB474
Csa6G502680Cucurbita moschata (Rifu)cmocuB670
Csa6G502680Melon (DHL92) v3.5.1cumeB480
Csa6G502680Melon (DHL92) v3.5.1cumeB485
Csa6G502680Melon (DHL92) v3.5.1cumeB500
Csa6G502680Watermelon (Charleston Gray)cuwcgB432
Csa6G502680Watermelon (Charleston Gray)cuwcgB473
Csa6G502680Watermelon (Charleston Gray)cuwcgB489
Csa6G502680Watermelon (Charleston Gray)cuwcgB512
Csa6G502680Watermelon (97103) v1cuwmB473
Csa6G502680Watermelon (97103) v1cuwmB483
Csa6G502680Watermelon (97103) v1cuwmB496
Csa6G502680Watermelon (97103) v1cuwmB500
Csa6G502680Cucurbita pepo (Zucchini)cpecuB085
Csa6G502680Cucurbita pepo (Zucchini)cpecuB585
Csa6G502680Cucurbita pepo (Zucchini)cpecuB846
Csa6G502680Bottle gourd (USVL1VR-Ls)culsiB451
Csa6G502680Bottle gourd (USVL1VR-Ls)culsiB469
Csa6G502680Bottle gourd (USVL1VR-Ls)culsiB484
Csa6G502680Cucumber (Gy14) v2cgybcuB077
Csa6G502680Cucumber (Gy14) v2cgybcuB140
Csa6G502680Cucumber (Gy14) v2cgybcuB187
Csa6G502680Melon (DHL92) v3.6.1cumedB459
Csa6G502680Melon (DHL92) v3.6.1cumedB465
Csa6G502680Melon (DHL92) v3.6.1cumedB480
Csa6G502680Silver-seed gourdcarcuB0441
Csa6G502680Silver-seed gourdcarcuB0962
Csa6G502680Silver-seed gourdcarcuB0996
Csa6G502680Silver-seed gourdcarcuB1034