CmoCh07G004860 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGTTCCAATCAAATCTGAAATCTAAAGCCTTCGCTCATTTGGACCCTCCCGCCTCTTCCTCTTCCTCTTCCTCTACCTCTTCGTAATTTCACTCCACACTCATCTCCCTCCTTCATTCTTCCTCGCCGTCATGGTCGTCATCTACACGCTCTGATTATCCACCTTCAATCTCACTCAATCACCTATTCTTGCTACGATTTTTTTCTCCGGTTTTAGGGATCCGTTTGCCTGGGTGCGGGCCCGAATTCTCTGGAAATCGGACAGGAAAGAACACCCATACGATTCCCCGTCGATCGCCAATTTCATATCCCTGAGTTGGTAGCTACAGACGACGGAATTGCGCCGAATTTCATCACGTTGATTTTGTTGGAATATTTGCGGTGCGGAGGCGGCGTAGATAATGGGGCTGCTTAGTATCATTCGTAAAATTAAAAGGAAGGAGAAGGAAATGCGCATACTCATGGTGTATGTAAAACTCTCTTTCTCTTTCCGCTTCGGTCTATTTCTCTGCATCTCATTCACTTGGATCCATTGTTGGTTGTGTTTTCAGAGGCCTTGACAACTCTGGGAAAACGACGATCGTTTTAAAGATTAACGGGGAGGATACTAGCGTTATCAGCCCTACACTTGGCTTCAATATCAAGACTATCATCTATCAGAAGTGAGCTTCCTTCCTAATTTTACCATGTTTTTCATTCATAATTATTTCTGGATTGAGATTTTCTTTTCAAGTTTTGGGATCTGTTATGCACACTCCTCACTCTTTAGTTGTTATTTAGCTCCAGCAAATAAATTGAGATGAACATGAACATCATGTATGGGTTATTTTGCAAGTCTTTCTTATTCTGAGAATTTTTGGTGATGACACGGAACAAATCTCATCTTCACTAATACATTAGTTGTTTTAACTAGATTCTAAGTTCTAAAACCTTAATCATCTACTTCTGGTTTGGTTGCTTTTTCTTGTGGGAAATTTTTCTAGTTCAGGTATTTGAAATTTTGAAATGCTATTAACTATTTTCTTTGATAGGTACACACTTAACATATGGGATGTTGGGGGCCAAAAGACTATAAGATCCTATTGGAGGAACTATTTTGAGCAGACTGATGGTTTAGTATGGGTTGTTGACAGTTCTGATCTTAGAAGATTGGATGATTGCAAATCAGAACTCGATAATCTTTTGAAAGAAGAGGTTAGAAGTCCCCCTTTTTTCATTGGGCAAATTGACAATGTCATAACCTATTTTCTCTGGTATAGTTGTGACTTGTATGTTGGTTTATGCATATATTTCCTTTATCTGTTTGATTTGGAATGACTGACTGCATCATTTCTTTAAACTGAAGTAAGCAAATTATAGGCTCCATCTTTCCATTTTCATTTTTTATATGAACCAAGACTATCACATTTTGGAATCGAAAATAATAGAGTTTCTATTTTAGCTTTGTTGAGAGCTAAGCTTTTAGCTTGCATATTCTTGTGTTTAGGCTCCCTCATGCATGTGTAGAGTGATTTTCACCTCATACGTAAGCGTACTCTCGCAATGCATGTGTAGAGTGATTCAAATCACTAGTTTAGAAACAAGTTTTCTTTACTCTTGATCTTTCATTAAGGTAATTCATTTCAAAACTTTTCCTTGGGTTGCTTCCATAACAATTTTTATATGTATTTGCGAGACATTACTAGTATGGACGATAATTTTGATCGTTTGATATTGTTTTCAAGTCTATAGTTTATTTTGACTCACGAGTAGTAAGTTATGAATTTGCTAGTGACTCGGCAAAATTTTTGAAGCATAGGCTTTATAAGTTGATATGTGGCCCTCTTATACTTTCAATCTGTGCTTTTGTGTATCCTCTCTTGTACTTTCATATATCATAATGAATCAGTTTCTTACTGAAAGAAAGATTAAAGTATACAAGCAGTAGATTAAATGTTAGCAATGCATGATCAAAGCTTCAATAAAATATTATATGGATGATAAAGAATGGTAATTTACTAATGTTGCCGATCATATTACAGAGGCTTTCTGGAGCATCATTGCTTATTCTAGCTAATAAGCAGGACATAAAAGGAGCTCTTTCTCCTGAGGAAATTACTAAAGTAAGAAGTTCCTCTTAGTTCAATTCTTCTTTGATTGGATCTTTTCAAGTTTTTTGTTCTGCTGAAGACCTTGCATGTTGTTATCGTTAGGCATAATTTAGTTCATTCCACATCTATTTGTAGGGTAGGCTACGTCCTCATGCAATAGTATTTTAGGAAAATCATGAGCATGAAATAAAGGCTGCATTGCATGTGTAGACTGCGAGGGCCAAAATGAGATTATAGTAACTGGCGTCTATTCTTCTTTCGATTATAGTAACTGGCATCTATTCTTCTTTTGAGGTCAGATGTTCTAAATCTCCATAATTGACAAACTTTTTGTATTAAAAAGAAATTACTAAGTTGGAGTTGGAGCTCTAAAAGAAATGCTGTCCAATGCCCAGTTTACAGTGAGGGGTTAACAAGAACTAGTACATTACTGCCTGCTTATTTGTTCATCTCTTGCTCTCCAGGTGCTGAACTTAGAAGCCATGGACAAAACCCGGCACTGGAACATTGTTGGCTGCAGCGCCTTCACTGGTGAGGGGCTGCTGGAGGGGTTCGATTGGTTGGTCCAAGACATTGCCTCCAGAATCTATGTGCTAGACTAGTACCTTTTTGATTCGATTTCTCGTTCCCGTGGAAACTGATCTAAATTTTGTTGAACATGTGTGTTGCTGCCCTTTCATGTTAAAGGCTCATCATTTTTGAAGAGTGATCGTAATTGTTTAAAATTATATATCTTTAAAGAAGAGATCTGGATGTTCATTTACATGGTTGAAAATACATATCTCAGGCAACGTCAGTAAAAGGGACTATCAATATG GAGAGTTCCAATCAAATCTGAAATCTAAAGCCTTCGCTCATTTGGACCCTCCCGCCTCTTCCTCTTCCTCTTCCTCTACCTCTTCGTAATTTCACTCCACACTCATCTCCCTCCTTCATTCTTCCTCGCCGTCATGGTCGTCATCTACACGCTCTGATTATCCACCTTCAATCTCACTCAATCACCTATTCTTGCTACGATTTTTTTCTCCGGTTTTAGGGATCCGTTTGCCTGGGTGCGGGCCCGAATTCTCTGGAAATCGGACAGGAAAGAACACCCATACGATTCCCCGTCGATCGCCAATTTCATATCCCTGAGTTGGTAGCTACAGACGACGGAATTGCGCCGAATTTCATCACGTTGATTTTGTTGGAATATTTGCGGTGCGGAGGCGGCGTAGATAATGGGGCTGCTTAGTATCATTCGTAAAATTAAAAGGAAGGAGAAGGAAATGCGCATACTCATGGTAGGCCTTGACAACTCTGGGAAAACGACGATCGTTTTAAAGATTAACGGGGAGGATACTAGCGTTATCAGCCCTACACTTGGCTTCAATATCAAGACTATCATCTATCAGAAGTACACACTTAACATATGGGATGTTGGGGGCCAAAAGACTATAAGATCCTATTGGAGGAACTATTTTGAGCAGACTGATGGTTTAGTATGGGTTGTTGACAGTTCTGATCTTAGAAGATTGGATGATTGCAAATCAGAACTCGATAATCTTTTGAAAGAAGAGAGGCTTTCTGGAGCATCATTGCTTATTCTAGCTAATAAGCAGGACATAAAAGGAGCTCTTTCTCCTGAGGAAATTACTAAAGTGCTGAACTTAGAAGCCATGGACAAAACCCGGCACTGGAACATTGTTGGCTGCAGCGCCTTCACTGGTGAGGGGCTGCTGGAGGGGTTCGATTGGTTGGTCCAAGACATTGCCTCCAGAATCTATGTGCTAGACTAGTACCTTTTTGATTCGATTTCTCGTTCCCGTGGAAACTGATCTAAATTTTGTTGAACATGTGTGTTGCTGCCCTTTCATGTTAAAGGCTCATCATTTTTGAAGAGTGATCGTAATTGTTTAAAATTATATATCTTTAAAGAAGAGATCTGGATGTTCATTTACATGGTTGAAAATACATATCTCAGGCAACGTCAGTAAAAGGGACTATCAATATG ATGGGGCTGCTTAGTATCATTCGTAAAATTAAAAGGAAGGAGAAGGAAATGCGCATACTCATGGTAGGCCTTGACAACTCTGGGAAAACGACGATCGTTTTAAAGATTAACGGGGAGGATACTAGCGTTATCAGCCCTACACTTGGCTTCAATATCAAGACTATCATCTATCAGAAGTACACACTTAACATATGGGATGTTGGGGGCCAAAAGACTATAAGATCCTATTGGAGGAACTATTTTGAGCAGACTGATGGTTTAGTATGGGTTGTTGACAGTTCTGATCTTAGAAGATTGGATGATTGCAAATCAGAACTCGATAATCTTTTGAAAGAAGAGAGGCTTTCTGGAGCATCATTGCTTATTCTAGCTAATAAGCAGGACATAAAAGGAGCTCTTTCTCCTGAGGAAATTACTAAAGTGCTGAACTTAGAAGCCATGGACAAAACCCGGCACTGGAACATTGTTGGCTGCAGCGCCTTCACTGGTGAGGGGCTGCTGGAGGGGTTCGATTGGTTGGTCCAAGACATTGCCTCCAGAATCTATGTGCTAGACTAG
BLAST of CmoCh07G004860 vs. Swiss-Prot
Match: ARF5_ARATH (ADP-ribosylation factor-like protein 2 OS=Arabidopsis thaliana GN=ARL2 PE=2 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 6.5e-96 Identity = 172/185 (92.97%), Postives = 182/185 (98.38%), Query Frame = 1
BLAST of CmoCh07G004860 vs. Swiss-Prot
Match: ARL2_DICDI (ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum GN=arl2 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 6.1e-70 Identity = 119/185 (64.32%), Postives = 158/185 (85.41%), Query Frame = 1
BLAST of CmoCh07G004860 vs. Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=1 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 3.2e-66 Identity = 118/185 (63.78%), Postives = 153/185 (82.70%), Query Frame = 1
BLAST of CmoCh07G004860 vs. Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4) HSP 1 Score: 251.9 bits (642), Expect = 5.4e-66 Identity = 118/185 (63.78%), Postives = 153/185 (82.70%), Query Frame = 1
BLAST of CmoCh07G004860 vs. Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-65 Identity = 116/185 (62.70%), Postives = 152/185 (82.16%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TrEMBL
Match: A0A0B2S9Y3_GLYSO (Putative ADP-ribosylation factor OS=Glycine soja GN=glysoja_003255 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.3e-95 Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TrEMBL
Match: A0A0A0KGG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502680 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.3e-95 Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TrEMBL
Match: A0A0L9URD7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g045300 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.3e-95 Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TrEMBL
Match: I1LHS7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G176300 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.3e-95 Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TrEMBL
Match: V7CFL0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G030600g PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 2.9e-95 Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TAIR10
Match: AT2G18390.1 (AT2G18390.1 ADP-ribosylation factor family protein) HSP 1 Score: 351.3 bits (900), Expect = 3.7e-97 Identity = 172/185 (92.97%), Postives = 182/185 (98.38%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TAIR10
Match: AT5G14670.1 (AT5G14670.1 ADP-ribosylation factor A1B) HSP 1 Score: 167.2 bits (422), Expect = 9.8e-42 Identity = 80/168 (47.62%), Postives = 114/168 (67.86%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein) HSP 1 Score: 167.2 bits (422), Expect = 9.8e-42 Identity = 81/167 (48.50%), Postives = 113/167 (67.66%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F) HSP 1 Score: 167.2 bits (422), Expect = 9.8e-42 Identity = 81/167 (48.50%), Postives = 113/167 (67.66%), Query Frame = 1
BLAST of CmoCh07G004860 vs. TAIR10
Match: AT3G62290.1 (AT3G62290.1 ADP-ribosylation factor A1E) HSP 1 Score: 166.0 bits (419), Expect = 2.2e-41 Identity = 80/167 (47.90%), Postives = 113/167 (67.66%), Query Frame = 1
BLAST of CmoCh07G004860 vs. NCBI nr
Match: gi|659080285|ref|XP_008440710.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Cucumis melo]) HSP 1 Score: 359.4 bits (921), Expect = 3.8e-96 Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 1
BLAST of CmoCh07G004860 vs. NCBI nr
Match: gi|657954852|ref|XP_008368877.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Malus domestica]) HSP 1 Score: 358.2 bits (918), Expect = 8.5e-96 Identity = 176/185 (95.14%), Postives = 183/185 (98.92%), Query Frame = 1
BLAST of CmoCh07G004860 vs. NCBI nr
Match: gi|1009144644|ref|XP_015889914.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Ziziphus jujuba]) HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95 Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 1
BLAST of CmoCh07G004860 vs. NCBI nr
Match: gi|1011996748|ref|XP_015961841.1| (PREDICTED: ADP-ribosylation factor-like protein 2 [Arachis duranensis]) HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95 Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 1
BLAST of CmoCh07G004860 vs. NCBI nr
Match: gi|951049954|ref|XP_014520081.1| (PREDICTED: ADP-ribosylation factor-like protein 2 isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 357.1 bits (915), Expect = 1.9e-95 Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |