Csa6G499020 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G499020
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 24615058 .. 24615759 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATCCATATCAGTGCTAGATTTGACTTATGCTTCTATGTCCCATTCTTTTTCAAGAGAGTTATTTATTCTGGATGTGCTCTCGTCTACAAGGGCTATCCTTTGTTTGTGAGAGAGAATGATGATTGGAAACCTAACTCGTCTCTCTACCTCTTTCAAGAGTTTTCCAACTCGTTCGGTTGGTTTTTCACAAATCACAATCTCAAATAACAATGTGTATAAAAGTTAATGATTAATATCTTTTGTAGGTAAAGGTTTTTAAATATAATAAAAATAGTGGATTTATTTATAACAAAATTTTGTTTTTTCTCATGCGTATTGAATGAAAAGTGTGTAACGTTTGTAAATATTTTAAAACCCTTCTAATTGATATTCAGAACAATCTTTTATATATATATCTATTTATGGAAGATATAGGAATTTGAATATACAGAAGAGAGTTATAGATATCAAAAACCCTAAACAGTGGTGGAGGGGAAGGGAAAGGAAGATGAGGGTGGGAGAGCGCCGGAAGGAAAAGCAAAAGCTGAGAGTAACAGTAGAGCGAGCCGTGCGTGTCGTTCTGTGGAGCACGTCAGTGATGACTGGGCGAGTGAGGTTAGGATGGAAAAGGAGGAAATGGGGGGAGTGAAGAAAGGGGGGCGTGGGTATCCAAGCCTAAACAGTTCTACAGATTCTCAATTACGGACATTTCAGTAA

mRNA sequence

ATGGCCATCCATATCAGTGCTAGATTTGACTTATGCTTCTATGTCCCATTCTTTTTCAAGAGAGTTATTTATTCTGGATGTGCTCTCGTCTACAAGGGCTATCCTTTGTTTGTGAGAGAGAATGATGATTGGAAACCTAACTCGTCTCTCTACCTCTTTCAAGAGTTTTCCAACTCGTTCGTGGTGGAGGGGAAGGGAAAGGAAGATGAGGGTGGGAGAGCGCCGGAAGGAAAAGCAAAAGCTGAGAGTAACAGTAGAGCGAGCCGTGCGTGTCGTTCTGTGGAGCACGTCAGTGATGACTGGGCGAGTGAGGTTAGGATGGAAAAGGAGGAAATGGGGGGAGTGAAGAAAGGGGGGCGTGGGTATCCAAGCCTAAACAGTTCTACAGATTCTCAATTACGGACATTTCAGTAA

Coding sequence (CDS)

ATGGCCATCCATATCAGTGCTAGATTTGACTTATGCTTCTATGTCCCATTCTTTTTCAAGAGAGTTATTTATTCTGGATGTGCTCTCGTCTACAAGGGCTATCCTTTGTTTGTGAGAGAGAATGATGATTGGAAACCTAACTCGTCTCTCTACCTCTTTCAAGAGTTTTCCAACTCGTTCGTGGTGGAGGGGAAGGGAAAGGAAGATGAGGGTGGGAGAGCGCCGGAAGGAAAAGCAAAAGCTGAGAGTAACAGTAGAGCGAGCCGTGCGTGTCGTTCTGTGGAGCACGTCAGTGATGACTGGGCGAGTGAGGTTAGGATGGAAAAGGAGGAAATGGGGGGAGTGAAGAAAGGGGGGCGTGGGTATCCAAGCCTAAACAGTTCTACAGATTCTCAATTACGGACATTTCAGTAA

Protein sequence

MAIHISARFDLCFYVPFFFKRVIYSGCALVYKGYPLFVRENDDWKPNSSLYLFQEFSNSFVVEGKGKEDEGGRAPEGKAKAESNSRASRACRSVEHVSDDWASEVRMEKEEMGGVKKGGRGYPSLNSSTDSQLRTFQ*
Homology
[Close]
BLAST of Csa6G499020 vs. TrEMBL
Match: A0A0A0KLS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499020 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 8.1e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1 

Query: 1   MAIHISARFDLCFYVPFFFKRVIYSGCALVYKGYPLFVRENDDWKPNSSLYLFQEFSNSF 60
           MAIHISARFDLCFYVPFFFKRVIYSGCALVYKGYPLFVRENDDWKPNSSLYLFQEFSNSF
Sbjct: 1   MAIHISARFDLCFYVPFFFKRVIYSGCALVYKGYPLFVRENDDWKPNSSLYLFQEFSNSF 60

Query: 61  VVEGKGKEDEGGRAPEGKAKAESNSRASRACRSVEHVSDDWASEVRMEKEEMGGVKKGGR 120
           VVEGKGKEDEGGRAPEGKAKAESNSRASRACRSVEHVSDDWASEVRMEKEEMGGVKKGGR
Sbjct: 61  VVEGKGKEDEGGRAPEGKAKAESNSRASRACRSVEHVSDDWASEVRMEKEEMGGVKKGGR 120

Query: 121 GYPSLNSSTDSQLRTFQ 138
           GYPSLNSSTDSQLRTFQ
Sbjct: 121 GYPSLNSSTDSQLRTFQ 137

[Close]
BLAST of Csa6G499020 vs. NCBI nr
Match: gi|700193502|gb|KGN48706.1| (hypothetical protein Csa_6G499020 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1 

Query: 1   MAIHISARFDLCFYVPFFFKRVIYSGCALVYKGYPLFVRENDDWKPNSSLYLFQEFSNSF 60
           MAIHISARFDLCFYVPFFFKRVIYSGCALVYKGYPLFVRENDDWKPNSSLYLFQEFSNSF
Sbjct: 1   MAIHISARFDLCFYVPFFFKRVIYSGCALVYKGYPLFVRENDDWKPNSSLYLFQEFSNSF 60

Query: 61  VVEGKGKEDEGGRAPEGKAKAESNSRASRACRSVEHVSDDWASEVRMEKEEMGGVKKGGR 120
           VVEGKGKEDEGGRAPEGKAKAESNSRASRACRSVEHVSDDWASEVRMEKEEMGGVKKGGR
Sbjct: 61  VVEGKGKEDEGGRAPEGKAKAESNSRASRACRSVEHVSDDWASEVRMEKEEMGGVKKGGR 120

Query: 121 GYPSLNSSTDSQLRTFQ 138
           GYPSLNSSTDSQLRTFQ
Sbjct: 121 GYPSLNSSTDSQLRTFQ 137

The following BLAST results are available for this feature:
BLAST of Csa6G499020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLS0_CUCSA8.1e-74100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499020 PE=4 SV=1[more]
BLAST of Csa6G499020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193502|gb|KGN48706.1|1.2e-73100.00hypothetical protein Csa_6G499020 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G499020.1Csa6G499020.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G499020CSPI06G29820Wild cucumber (PI 183967)cpicuB313
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G499020Melon (DHL92) v3.6.1cumedB462
Csa6G499020Melon (DHL92) v3.6.1cumedB453
Csa6G499020Melon (DHL92) v3.6.1cumedB483
Csa6G499020Silver-seed gourdcarcuB0063
Csa6G499020Silver-seed gourdcarcuB0441
Csa6G499020Silver-seed gourdcarcuB0659
Csa6G499020Silver-seed gourdcarcuB0776
Csa6G499020Watermelon (97103) v2cuwmbB412
Csa6G499020Watermelon (97103) v2cuwmbB424
Csa6G499020Watermelon (97103) v2cuwmbB496
Csa6G499020Watermelon (97103) v2cuwmbB502
Csa6G499020Wax gourdcuwgoB625
Csa6G499020Wax gourdcuwgoB647
Csa6G499020Cucumber (Chinese Long) v2cucuB070
Csa6G499020Cucumber (Chinese Long) v2cucuB073
Csa6G499020Cucumber (Chinese Long) v2cucuB122
Csa6G499020Cucumber (Gy14) v1cgycuB452
Csa6G499020Cucumber (Gy14) v1cgycuB121
Csa6G499020Cucumber (Gy14) v1cgycuB242
Csa6G499020Cucurbita maxima (Rimu)cmacuB192
Csa6G499020Cucurbita maxima (Rimu)cmacuB199
Csa6G499020Cucurbita maxima (Rimu)cmacuB681
Csa6G499020Cucurbita maxima (Rimu)cmacuB810
Csa6G499020Cucurbita maxima (Rimu)cmacuB877
Csa6G499020Cucurbita moschata (Rifu)cmocuB177
Csa6G499020Cucurbita moschata (Rifu)cmocuB184
Csa6G499020Cucurbita moschata (Rifu)cmocuB670
Csa6G499020Cucurbita moschata (Rifu)cmocuB799
Csa6G499020Cucurbita moschata (Rifu)cmocuB865
Csa6G499020Melon (DHL92) v3.5.1cumeB471
Csa6G499020Melon (DHL92) v3.5.1cumeB482
Csa6G499020Melon (DHL92) v3.5.1cumeB503
Csa6G499020Watermelon (Charleston Gray)cuwcgB431
Csa6G499020Watermelon (Charleston Gray)cuwcgB432
Csa6G499020Watermelon (Charleston Gray)cuwcgB511
Csa6G499020Watermelon (97103) v1cuwmB466
Csa6G499020Watermelon (97103) v1cuwmB472
Csa6G499020Watermelon (97103) v1cuwmB500
Csa6G499020Watermelon (97103) v1cuwmB535
Csa6G499020Cucurbita pepo (Zucchini)cpecuB085
Csa6G499020Cucurbita pepo (Zucchini)cpecuB123
Csa6G499020Cucurbita pepo (Zucchini)cpecuB503
Csa6G499020Cucurbita pepo (Zucchini)cpecuB839
Csa6G499020Cucurbita pepo (Zucchini)cpecuB845
Csa6G499020Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G499020Bottle gourd (USVL1VR-Ls)culsiB477
Csa6G499020Bottle gourd (USVL1VR-Ls)culsiB455
Csa6G499020Bottle gourd (USVL1VR-Ls)culsiB483
Csa6G499020Cucumber (Gy14) v2cgybcuB081
Csa6G499020Cucumber (Gy14) v2cgybcuB147
Csa6G499020Cucumber (Gy14) v2cgybcuB281