Csa6G497190 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACTTTTAAATAAAACTGAATGAATGGTTAACTTTCGGGCATCAATAGCGATGGAGTCCAAATTTCCTAAACCTAAGTCAGAGTTTCGTCCTTAGTTTTCCGGCCTAAAGTTCACTAGAAGAGAAGACGAATAAATAGTTGCCGATTTTCTAGTCCGACTGTCTCCGTTTAAGATGGATTACGAGAACAAATTCGTCCTAGCTCCCATGGTTCGCGTTGTAAGTTAGACCAAATGATAATATCTATTGCTTGAGTTGCTCTCATTACTTGATCGAGTTTATCTTCTAATCTTAGTTTTTGTAAAAAAAATTGCCGCTCGATTGTCTACATCTAGATGCCAAACAATTATTTGGAATAGTTTGAAGCTAGATTAGTAAATCACTTAATCGTAGTTATTTCTTTCAAAATACCCGCCAGATTGTATCCGTTTAGGTTGCTGTTATTGGAGAATTGTGAATTTGATGAGATTATGTGTTTCGAATTACAAAAGTTTTTTTCATGGAGCTTTTCGTTATTGGCCTTTCATGTTTTCAGGGAACGTTACCGTTTAGATTATTAGCTTCACAATACGGTGCAGACATCACCTATGGCGAGGAAATTATTGACCATAAGATGATCAAATGCGAGCGTAGATTAAATGGTAGTGGTACTTTTCTTCTCTGTATTGTTAAAAAATTGTAGTTATTGATTTTCAATTGTACTCTCACACCAAATGCGATGTTTATGATATAGCAGTGTTACTCTATTCATATTAAGTCTATTTCACCCAGAAAAATGATATATTGACTTCACCTGTAGAGATAAATTGTTGCTGTCGTATGCATATTGGCAATAAGTTAATGTGTTCATTTATTGATAATTATGGATATGCTTGTTTAATGTTATCCTCTATCCATTTTTTTCAATCTTGTATTTGAAGTTATCAATTTGTTGGAATTTTTATTTTTGTCTATAATTAGAAGGAAACATGTGATTGGTTAGCGGCTTAGGAGATGAAGGTTGCATCAAGCATATTTTCTTCCCTTTTCTTCACCAATTATGGTCTAGTGAACTTCCTGTACTTCTTTTCATCCAGAGCATGTAGGTTCAACTGATTTTGTTGAGAAGGGGACAAACAATGTAGTTTTCAGGACCTGCAGCCTTGAAAGAAAACATGTAGTTTTTCAAATGGGTACTTCTAATGCTGCGAGGGCCCTAAGTGCTGCTCAACTAGTGTAAGTTTGTTACTTTAATTTTTTTCCCTTCTTACACAATTGCGGTTCTATAAATTTTGGTGGTGGTTATCGTGACTTCATACTTTGTGCTCTGTACCATATTCTTACTATTATTATTTATCCTTCAATTTATTGTAATAAGCTCTGTTATGGATTGAACTTAATCTTTGTTTATTTACTTGTTCGATTAATGTGATGATGTGATTTATTTCTTAGTAGCCTCTTTTGTGGTCACTTTTTAGTGGCAGTTTTTCTTCCATTATTTAATTTAATGTGATCATCTTGATAACCATACGGGGTTCATTTGGCTTAGTTGATTATGTCCCATACTGTTTCGTTGTGGTTGTGATTAGGTACGAAGAGGAAAAAAGAAGTGAAAATCTTCTGTCAATTTCATGCAAAATGAAACCTATAATTGATTAGTCGTACGTTGACGATGAGCAACAGTATGGAGTCAAGTAGTTGTTATGATGACAGATAAAAGGATTTTTTTCTTGATACCTTTAAATGTTCACTAAGTAAGTGGAAGTTGATTGCTGTGAGCAGTTGCATCAAATCATTAGGCTCTCTATGGATGACTTCTGTGTTAGGGGATAATTGGGTACTTAATTGGTGAAGAATGCTTCGTTTTCTAATGAAACCATATTTGTATAACTGATGGAAAAGTTTCTTTTTGTAGGTGTCAAGACGTTGCTGCCATAGATATCAACATGGGTTGCCCTAAGTCATTTTCCATCAGTGGGGGCATGGGTGCGGCACTATTGAATAAACCAGACCTTATTCATGATGTATGCAATTCATATCCTTACGGATTGATATAATTTCTGATTTATTCTCCCTCTTTTGTACTTCTGGCAATATTACTTTCCTACTCACCTTTTATTTACTTGTTTTTTCAGATTTTGACAACATTGAGGAGAAACTTGAACATTCTAATTACCTGTAAGATTCGACTGTTAAATTCACCTCAGGATACAGTGGAGTTAGCTAGACGAATAGAGAGTACTGGTGTTTCAGCTCTTGGTGTTCATGGCAGGTGATCGTCAAGTTTTTGCAGTTTCCTTCTATTTAAGACACTTATCATTTATGCCCGAAGAATTTAGCTGTAGAATAGGGTTTGTGGTTTGTCTCTAAGCAAGTTGGTTCAAACACTCATGGATATTAAAGAAACGAGTTTGGTTTTTTTTCTTCCCCCCCAAGCAGAGGGTTGAGGAAACACGCTCTCACAAAACTAATAAAGGAGAGTCTGCCAATTGTTAATAGTCAATTACAACAGAGAACATTCATTTGCTACAAAACATTTAGATGTACTTTTGTGCTTTAAGAAGGGCAGTAACTTAGATGTCTCTTGCATTTGAGGCTTTAAAATTTGTAATTCATTCTAGTTCTAAAAGAAATTAGGAATGAGAGATTGCTAGTAAGGAAGCCGAATAATGAATATGTACTACCAAACATGCTCATAGGGAAAAATTTAAAACTATGGTGAATAGTATGCTTTGTTGTTTCTTTCATTTTTTCCCTCTACAATAATGAAAAAAGGAAAAAGAATTGAGCTGCATTGCCTCAGCTGAAAACAAAAGAAAGTGAAAGAATAAACTAGATTTGATCAAACCTTTTAGTTCCAAATATACTTCTGTTAGCTTTGCATGAATGCTTTGTTTTCATTCTATTTTAATTGGTTTTTGTAGTCATGCTCGATAACTTGCAGAAGAGTTGCAGATAGACCAAGAGATCCAGCTAAATGGAGTGAGATTGCAGATGTTGTAGCAGCATTGACTATTCCTGTTATTGCAAATGGTGACATCTTTGAGTATGATGATTTTCAACGGATCAAAGTTCATACAGGTATGTATGTACAGAAGGCACTGTTTTTGTTTTGTTTTGGGGTGTGTGCGTGGGAGGAGGGGTGGTACTACTAATTAGAACTCTTTAAAACTGATTGTACCACATTCGTTAAGAGGTTGCTTTTACCTGGCTTGACCTCTTTCATTTCCTTTACTGGTCCACTCGTAAATAAAACAGATAACGGCCATATTTACTAGAAACACTCATTTAGCTTTTGATATACCAACCAGTGAAGCAATATGGTGATAGCGAGTTAGTTTTGAACTAGAGGTAGAGGTCCAAAATGTCTTATAAGTTTCCTGGCTACCGTCATGTACTGTCAGAAAATAGTTTTGCATGGATAATTAAGCCATGCACAAGCCACAAGCACAACATTTCCAACCATCGATTGTAAAAATCCAGTTATCCAATAATTGCCGAGTGTGGAAGAAACAATTTGGAAAAAATTTCAGTTCTTAACCTACAAGGCTGAAATAGTTCCAATGCTTTTTGAATTAGCAAATAAACTAATTACGGTGTTACTGTTACTTCAACTTGTTAACCATGTGGAATGGTGTAAACAAATGGTCTTGATACTTTGCGTTCCTCTGGTGGAAGAGAGTGTGTGGTTAAATTTAATTGACATGAATGAACTATAGTAAAGTTGTGATTCATCAGGATGAAGCTGCTTGGGCCGACAGATGCTATTTCAAGCAGTTTAGGTTTTTACTTGTCTGTCCATTCTCTCTTGGTTTAAATATTAAAACAATCTGGTATTGCGCAAGGTGCTTCTTCAATGATGGTTGCTCGAGGAGCCCTTTGGAATGCTTCAATCTTCTCTCCAGAAGGCAAATTACCATGGGAAGATGTGAAAAGAGAATATGTTAGGAAGGTGAGGTACTTATCATGCACACAGTTCATTCAATCAATTAATTAGTTAATCAGAGTGAATGCTTAGAGCTTTACAGTGCCCTCACTAGATTTTACGTATGTAGATACACACACAAACAGAATTGAAGTGATTAAATTCTTGTGTTGAACTCAGAGCATCTTGTGGGATAATGATATCAAAAGTACGAAGTACACGCTAAAAGAAATGATAATGCATCATTCTTGTCTTGAACTGCCAGAAGGAAAGGCCGTGATAAAATCTGAATCCCTTGCAGATCTAGCGTAAGTAAATGCTATTAGTTTACAACCACTATTGCCATTTTAACTTTTGAGCTAGCTTTGAGCTGATTCGCCATTAAACATTCCATCTTTTGTTTTCTTTATGATATATAGGAAACTTTATGGTGAGGAAAAATACTATCAATTCGTTCAAGAGAATCGGTCTTTCAATGAAAGTAGATGATGGCGTTTCACAGAGATGCTTGTTGCCATACTTTCAACAGAGAAACCTAACAGACTAGGAGAACCTTGCAGCTACAATGTCGTTTTATTCTCAGTAAAACCCATTTAATTGATTATACAGATGCATCAGGTATATTACCGAATCATTCTTTGGCATAGTATGGAGAAGTTGAATGCTTAAGGCAGCATTATATGTTTTAATATATTTTTTCGCCTTTCACCCCTATTTTGTTGAAAACTCCGAGTTATTTACCTGTCACAGTTAATGCAAGTGATTATATTTATATCCAATAAAAACTTTAAAAACATAATGCCACA ATGGATTACGAGAACAAATTCGTCCTAGCTCCCATGGTTCGCGTTGGAACGTTACCGTTTAGATTATTAGCTTCACAATACGGTGCAGACATCACCTATGGCGAGGAAATTATTGACCATAAGATGATCAAATGCGAGCGTAGATTAAATGAGCATGTAGGTTCAACTGATTTTGTTGAGAAGGGGACAAACAATGTAGTTTTCAGGACCTGCAGCCTTGAAAGAAAACATGTAGTTTTTCAAATGGGTACTTCTAATGCTGCGAGGGCCCTAAGTGCTGCTCAACTAGTGTGTCAAGACGTTGCTGCCATAGATATCAACATGGGTTGCCCTAAGTCATTTTCCATCAGTGGGGGCATGGGTGCGGCACTATTGAATAAACCAGACCTTATTCATGATATTTTGACAACATTGAGGAGAAACTTGAACATTCTAATTACCTGTAAGATTCGACTGTTAAATTCACCTCAGGATACAGTGGAGTTAGCTAGACGAATAGAGAGTACTGGTGTTTCAGCTCTTGGTGTTCATGGCAGAAGAGTTGCAGATAGACCAAGAGATCCAGCTAAATGGAGTGAGATTGCAGATGTTGTAGCAGCATTGACTATTCCTGTTATTGCAAATGGTGACATCTTTGAGTATGATGATTTTCAACGGATCAAAGTTCATACAGGTGCTTCTTCAATGATGGTTGCTCGAGGAGCCCTTTGGAATGCTTCAATCTTCTCTCCAGAAGGCAAATTACCATGGGAAGATGTGAAAAGAGAATATGTTAGGAAGAGCATCTTGTGGGATAATGATATCAAAAGTACGAAGTACACGCTAAAAGAAATGATAATGCATCATTCTTGTCTTGAACTGCCAGAAGGAAAGGCCGTGATAAAATCTGAATCCCTTGCAGATCTAGCGAAACTTTATGGTGAGGAAAAATACTATCAATTCGTTCAAGAGAATCGGTCTTTCAATGAAAGTAGATGA ATGGATTACGAGAACAAATTCGTCCTAGCTCCCATGGTTCGCGTTGGAACGTTACCGTTTAGATTATTAGCTTCACAATACGGTGCAGACATCACCTATGGCGAGGAAATTATTGACCATAAGATGATCAAATGCGAGCGTAGATTAAATGAGCATGTAGGTTCAACTGATTTTGTTGAGAAGGGGACAAACAATGTAGTTTTCAGGACCTGCAGCCTTGAAAGAAAACATGTAGTTTTTCAAATGGGTACTTCTAATGCTGCGAGGGCCCTAAGTGCTGCTCAACTAGTGTGTCAAGACGTTGCTGCCATAGATATCAACATGGGTTGCCCTAAGTCATTTTCCATCAGTGGGGGCATGGGTGCGGCACTATTGAATAAACCAGACCTTATTCATGATATTTTGACAACATTGAGGAGAAACTTGAACATTCTAATTACCTGTAAGATTCGACTGTTAAATTCACCTCAGGATACAGTGGAGTTAGCTAGACGAATAGAGAGTACTGGTGTTTCAGCTCTTGGTGTTCATGGCAGAAGAGTTGCAGATAGACCAAGAGATCCAGCTAAATGGAGTGAGATTGCAGATGTTGTAGCAGCATTGACTATTCCTGTTATTGCAAATGGTGACATCTTTGAGTATGATGATTTTCAACGGATCAAAGTTCATACAGGTGCTTCTTCAATGATGGTTGCTCGAGGAGCCCTTTGGAATGCTTCAATCTTCTCTCCAGAAGGCAAATTACCATGGGAAGATGTGAAAAGAGAATATGTTAGGAAGAGCATCTTGTGGGATAATGATATCAAAAGTACGAAGTACACGCTAAAAGAAATGATAATGCATCATTCTTGTCTTGAACTGCCAGAAGGAAAGGCCGTGATAAAATCTGAATCCCTTGCAGATCTAGCGAAACTTTATGGTGAGGAAAAATACTATCAATTCGTTCAAGAGAATCGGTCTTTCAATGAAAGTAGATGA MDYENKFVLAPMVRVGTLPFRLLASQYGADITYGEEIIDHKMIKCERRLNEHVGSTDFVEKGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPKSFSISGGMGAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVSALGVHGRRVADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVARGALWNASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKAVIKSESLADLAKLYGEEKYYQFVQENRSFNESR*
BLAST of Csa6G497190 vs. Swiss-Prot
Match: DUS2L_HUMAN (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS2 PE=1 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 8.8e-80 Identity = 158/327 (48.32%), Postives = 215/327 (65.75%), Query Frame = 1
BLAST of Csa6G497190 vs. Swiss-Prot
Match: DUS2L_MOUSE (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus2 PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.8e-78 Identity = 155/315 (49.21%), Postives = 211/315 (66.98%), Query Frame = 1
BLAST of Csa6G497190 vs. Swiss-Prot
Match: DUS2_SCHPO (tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus2 PE=3 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 4.6e-52 Identity = 120/320 (37.50%), Postives = 178/320 (55.62%), Query Frame = 1
BLAST of Csa6G497190 vs. Swiss-Prot
Match: DUS2_YEAST (tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMM1 PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.8e-40 Identity = 110/298 (36.91%), Postives = 167/298 (56.04%), Query Frame = 1
BLAST of Csa6G497190 vs. Swiss-Prot
Match: DUS4L_MOUSE (tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus4l PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.2e-29 Identity = 85/258 (32.95%), Postives = 129/258 (50.00%), Query Frame = 1
BLAST of Csa6G497190 vs. TrEMBL
Match: A5ALC4_VITVI (tRNA-dihydrouridine synthase OS=Vitis vinifera GN=VITISV_024917 PE=3 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 4.9e-154 Identity = 268/319 (84.01%), Postives = 299/319 (93.73%), Query Frame = 1
BLAST of Csa6G497190 vs. TrEMBL
Match: A0A067KB11_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18371 PE=4 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 1.4e-153 Identity = 267/319 (83.70%), Postives = 299/319 (93.73%), Query Frame = 1
BLAST of Csa6G497190 vs. TrEMBL
Match: V4SKP9_9ROSI (tRNA-dihydrouridine synthase OS=Citrus clementina GN=CICLE_v10026068mg PE=3 SV=1) HSP 1 Score: 545.8 bits (1405), Expect = 3.5e-152 Identity = 263/319 (82.45%), Postives = 298/319 (93.42%), Query Frame = 1
BLAST of Csa6G497190 vs. TrEMBL
Match: A0A061DPF2_THECC (tRNA-dihydrouridine synthase OS=Theobroma cacao GN=TCM_000905 PE=3 SV=1) HSP 1 Score: 544.3 bits (1401), Expect = 1.0e-151 Identity = 264/319 (82.76%), Postives = 296/319 (92.79%), Query Frame = 1
BLAST of Csa6G497190 vs. TrEMBL
Match: B9SSD6_RICCO (tRNA-dihydrouridine synthase OS=Ricinus communis GN=RCOM_0188130 PE=3 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 1.3e-151 Identity = 261/319 (81.82%), Postives = 296/319 (92.79%), Query Frame = 1
BLAST of Csa6G497190 vs. TAIR10
Match: AT3G49640.1 (AT3G49640.1 Aldolase-type TIM barrel family protein) HSP 1 Score: 491.9 bits (1265), Expect = 3.1e-139 Identity = 234/316 (74.05%), Postives = 276/316 (87.34%), Query Frame = 1
BLAST of Csa6G497190 vs. TAIR10
Match: AT5G67220.1 (AT5G67220.1 FMN-linked oxidoreductases superfamily protein) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27 Identity = 78/247 (31.58%), Postives = 119/247 (48.18%), Query Frame = 1
BLAST of Csa6G497190 vs. NCBI nr
Match: gi|449451357|ref|XP_004143428.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]) HSP 1 Score: 649.8 bits (1675), Expect = 2.5e-183 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1
BLAST of Csa6G497190 vs. NCBI nr
Match: gi|659079878|ref|XP_008440492.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]) HSP 1 Score: 638.6 bits (1646), Expect = 5.7e-180 Identity = 318/325 (97.85%), Postives = 323/325 (99.38%), Query Frame = 1
BLAST of Csa6G497190 vs. NCBI nr
Match: gi|147797460|emb|CAN64677.1| (hypothetical protein VITISV_024917 [Vitis vinifera]) HSP 1 Score: 552.0 bits (1421), Expect = 7.1e-154 Identity = 268/319 (84.01%), Postives = 299/319 (93.73%), Query Frame = 1
BLAST of Csa6G497190 vs. NCBI nr
Match: gi|802681614|ref|XP_012082133.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]) HSP 1 Score: 550.4 bits (1417), Expect = 2.1e-153 Identity = 267/319 (83.70%), Postives = 299/319 (93.73%), Query Frame = 1
BLAST of Csa6G497190 vs. NCBI nr
Match: gi|1009145720|ref|XP_015890488.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]) HSP 1 Score: 548.9 bits (1413), Expect = 6.0e-153 Identity = 269/318 (84.59%), Postives = 295/318 (92.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |