Csa6G490070 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G490070
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 23200277 .. 23200615 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGCAGTCAATTCTTATGAACACTCACAGAACAAGACTTGTTTTTCTCGTGATGCAATTGATTCGCGGGATGCTAACGCGATATATCTTCCCAATCTCACGCCATTCTTGGCATTTTTAGTGGCCTGCTGTACAGAATACTTGACTTGCGGTTTCAGGAGACAAGAAAATGCTCAAGTGGAATCATTTTACATTCCAAAGATGGAGTATCTATCGGATATTAACTCTTCTTGGACGTATGGCCATGGCTGCTTCACAGCGGCCGTCAGGATTGGCAAGTTATACCTCTTAATTTGGTTTATATATCAACGTATCGATCTCTACAGCATGTTTTAA

mRNA sequence

ATGTATGCAGTCAATTCTTATGAACACTCACAGAACAAGACTTGTTTTTCTCGTGATGCAATTGATTCGCGGGATGCTAACGCGATATATCTTCCCAATCTCACGCCATTCTTGGCATTTTTAGTGGCCTGCTGTACAGAATACTTGACTTGCGGTTTCAGGAGACAAGAAAATGCTCAAGTGGAATCATTTTACATTCCAAAGATGGAGTATCTATCGGATATTAACTCTTCTTGGACGTATGGCCATGGCTGCTTCACAGCGGCCGTCAGGATTGGCAAGTTATACCTCTTAATTTGGTTTATATATCAACGTATCGATCTCTACAGCATGTTTTAA

Coding sequence (CDS)

ATGTATGCAGTCAATTCTTATGAACACTCACAGAACAAGACTTGTTTTTCTCGTGATGCAATTGATTCGCGGGATGCTAACGCGATATATCTTCCCAATCTCACGCCATTCTTGGCATTTTTAGTGGCCTGCTGTACAGAATACTTGACTTGCGGTTTCAGGAGACAAGAAAATGCTCAAGTGGAATCATTTTACATTCCAAAGATGGAGTATCTATCGGATATTAACTCTTCTTGGACGTATGGCCATGGCTGCTTCACAGCGGCCGTCAGGATTGGCAAGTTATACCTCTTAATTTGGTTTATATATCAACGTATCGATCTCTACAGCATGTTTTAA

Protein sequence

MYAVNSYEHSQNKTCFSRDAIDSRDANAIYLPNLTPFLAFLVACCTEYLTCGFRRQENAQVESFYIPKMEYLSDINSSWTYGHGCFTAAVRIGKLYLLIWFIYQRIDLYSMF*
Homology
[Close]
BLAST of Csa6G490070 vs. TrEMBL
Match: A0A0A0KJG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490070 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.2e-60
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MYAVNSYEHSQNKTCFSRDAIDSRDANAIYLPNLTPFLAFLVACCTEYLTCGFRRQENAQ 60
           MYAVNSYEHSQNKTCFSRDAIDSRDANAIYLPNLTPFLAFLVACCTEYLTCGFRRQENAQ
Sbjct: 1   MYAVNSYEHSQNKTCFSRDAIDSRDANAIYLPNLTPFLAFLVACCTEYLTCGFRRQENAQ 60

Query: 61  VESFYIPKMEYLSDINSSWTYGHGCFTAAVRIGKLYLLIWFIYQRIDLYSMF 113
           VESFYIPKMEYLSDINSSWTYGHGCFTAAVRIGKLYLLIWFIYQRIDLYSMF
Sbjct: 61  VESFYIPKMEYLSDINSSWTYGHGCFTAAVRIGKLYLLIWFIYQRIDLYSMF 112

[Close]
BLAST of Csa6G490070 vs. NCBI nr
Match: gi|700193288|gb|KGN48492.1| (hypothetical protein Csa_6G490070 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 6.0e-60
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MYAVNSYEHSQNKTCFSRDAIDSRDANAIYLPNLTPFLAFLVACCTEYLTCGFRRQENAQ 60
           MYAVNSYEHSQNKTCFSRDAIDSRDANAIYLPNLTPFLAFLVACCTEYLTCGFRRQENAQ
Sbjct: 1   MYAVNSYEHSQNKTCFSRDAIDSRDANAIYLPNLTPFLAFLVACCTEYLTCGFRRQENAQ 60

Query: 61  VESFYIPKMEYLSDINSSWTYGHGCFTAAVRIGKLYLLIWFIYQRIDLYSMF 113
           VESFYIPKMEYLSDINSSWTYGHGCFTAAVRIGKLYLLIWFIYQRIDLYSMF
Sbjct: 61  VESFYIPKMEYLSDINSSWTYGHGCFTAAVRIGKLYLLIWFIYQRIDLYSMF 112

The following BLAST results are available for this feature:
BLAST of Csa6G490070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJG6_CUCSA4.2e-60100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490070 PE=4 SV=1[more]
BLAST of Csa6G490070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193288|gb|KGN48492.1|6.0e-60100.00hypothetical protein Csa_6G490070 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU100567cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G490070.1Csa6G490070.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU100567CU100567transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G490070CSPI06G27760Wild cucumber (PI 183967)cpicuB313
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G490070Cucumber (Chinese Long) v2cucuB075
Csa6G490070Cucumber (Chinese Long) v2cucuB076
Csa6G490070Cucumber (Gy14) v1cgycuB121
Csa6G490070Cucumber (Gy14) v1cgycuB134
Csa6G490070Cucumber (Gy14) v1cgycuB329
Csa6G490070Cucurbita maxima (Rimu)cmacuB144
Csa6G490070Cucurbita maxima (Rimu)cmacuB629
Csa6G490070Cucurbita maxima (Rimu)cmacuB681
Csa6G490070Cucurbita maxima (Rimu)cmacuB809
Csa6G490070Cucurbita maxima (Rimu)cmacuB877
Csa6G490070Cucurbita moschata (Rifu)cmocuB023
Csa6G490070Cucurbita moschata (Rifu)cmocuB475
Csa6G490070Cucurbita moschata (Rifu)cmocuB670
Csa6G490070Cucurbita moschata (Rifu)cmocuB802
Csa6G490070Cucurbita moschata (Rifu)cmocuB865
Csa6G490070Melon (DHL92) v3.5.1cumeB472
Csa6G490070Melon (DHL92) v3.5.1cumeB503
Csa6G490070Watermelon (Charleston Gray)cuwcgB420
Csa6G490070Watermelon (Charleston Gray)cuwcgB432
Csa6G490070Watermelon (Charleston Gray)cuwcgB451
Csa6G490070Watermelon (Charleston Gray)cuwcgB505
Csa6G490070Watermelon (97103) v1cuwmB448
Csa6G490070Watermelon (97103) v1cuwmB464
Csa6G490070Watermelon (97103) v1cuwmB500
Csa6G490070Watermelon (97103) v1cuwmB525
Csa6G490070Cucurbita pepo (Zucchini)cpecuB085
Csa6G490070Cucurbita pepo (Zucchini)cpecuB503
Csa6G490070Cucurbita pepo (Zucchini)cpecuB583
Csa6G490070Cucurbita pepo (Zucchini)cpecuB840
Csa6G490070Bottle gourd (USVL1VR-Ls)culsiB420
Csa6G490070Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G490070Bottle gourd (USVL1VR-Ls)culsiB454
Csa6G490070Cucumber (Gy14) v2cgybcuB083
Csa6G490070Cucumber (Gy14) v2cgybcuB281
Csa6G490070Melon (DHL92) v3.6.1cumedB419
Csa6G490070Melon (DHL92) v3.6.1cumedB454
Csa6G490070Melon (DHL92) v3.6.1cumedB483
Csa6G490070Silver-seed gourdcarcuB0205
Csa6G490070Silver-seed gourdcarcuB0441
Csa6G490070Silver-seed gourdcarcuB0826
Csa6G490070Silver-seed gourdcarcuB0907
Csa6G490070Watermelon (97103) v2cuwmbB412
Csa6G490070Watermelon (97103) v2cuwmbB441
Csa6G490070Watermelon (97103) v2cuwmbB495
Csa6G490070Watermelon (97103) v2cuwmbB512
Csa6G490070Wax gourdcuwgoB585
Csa6G490070Wax gourdcuwgoB603
Csa6G490070Wax gourdcuwgoB630