Csa6G487600 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAACATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGGTGAGTTTCATGTTTCGAGTCTTGATCTACCTAATGAAACTTTGATTTTCGTATAATTCGAGAAATTAGGGTTTAGAAATAGCTGAATTGATTGAACTCGAAAAAGATAGTTGAAACTACTGTTGCGAGGCGATTTCTTCCTTTATTATAGTCCAATTCTTTGTAGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGAATGCCGAGCGTTGGAAACAGAGGTACGTAAGTAATGTGTATATATAAATTATTAAATCCGAGTGGAATTGAAACACATTCAATTCAACAGTGTAAGTAATTTATGCATACACATATATAGAAGAACTTCATCTGAATTGAGAAAGAATCTGAAATAGTTAAAGGGTT ATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGA ATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGA MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSVSFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI*
BLAST of Csa6G487600 vs. Swiss-Prot
Match: STEP2_ARATH (Stress enhanced protein 2, chloroplastic OS=Arabidopsis thaliana GN=SEP2 PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.2e-48 Identity = 105/206 (50.97%), Postives = 135/206 (65.53%), Query Frame = 1
BLAST of Csa6G487600 vs. TrEMBL
Match: A0A0A0KI08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487600 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 3.2e-123 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Csa6G487600 vs. TrEMBL
Match: A0A151QWU1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_044293 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 9.5e-59 Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 1
BLAST of Csa6G487600 vs. TrEMBL
Match: A0A0B2RAE6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008444 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58 Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1
BLAST of Csa6G487600 vs. TrEMBL
Match: I1KT92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G141300 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58 Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1
BLAST of Csa6G487600 vs. TrEMBL
Match: A0A067KTV2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09398 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 6.1e-58 Identity = 126/200 (63.00%), Postives = 148/200 (74.00%), Query Frame = 1
BLAST of Csa6G487600 vs. TAIR10
Match: AT2G21970.1 (AT2G21970.1 stress enhanced protein 2) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49 Identity = 105/206 (50.97%), Postives = 135/206 (65.53%), Query Frame = 1
BLAST of Csa6G487600 vs. NCBI nr
Match: gi|449448410|ref|XP_004141959.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis sativus]) HSP 1 Score: 449.1 bits (1154), Expect = 4.6e-123 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Csa6G487600 vs. NCBI nr
Match: gi|659079234|ref|XP_008440147.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis melo]) HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97 Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 1
BLAST of Csa6G487600 vs. NCBI nr
Match: gi|1012322405|gb|KYP34719.1| (hypothetical protein KK1_044293 [Cajanus cajan]) HSP 1 Score: 235.0 bits (598), Expect = 1.4e-58 Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 1
BLAST of Csa6G487600 vs. NCBI nr
Match: gi|356525533|ref|XP_003531379.1| (PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max]) HSP 1 Score: 234.6 bits (597), Expect = 1.8e-58 Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1
BLAST of Csa6G487600 vs. NCBI nr
Match: gi|802615505|ref|XP_012075221.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Jatropha curcas]) HSP 1 Score: 232.3 bits (591), Expect = 8.8e-58 Identity = 126/200 (63.00%), Postives = 148/200 (74.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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