Csa6G487600 (gene) Cucumber (Chinese Long) v2

NameCsa6G487600
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Description2-Sep; contains IPR023329 (Chlorophyll a/b binding protein domain)
LocationChr6 : 22870567 .. 22871596 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGGTGAGTTTCATGTTTCGAGTCTTGATCTACCTAATGAAACTTTGATTTTCGTATAATTCGAGAAATTAGGGTTTAGAAATAGCTGAATTGATTGAACTCGAAAAAGATAGTTGAAACTACTGTTGCGAGGCGATTTCTTCCTTTATTATAGTCCAATTCTTTGTAGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGAATGCCGAGCGTTGGAAACAGAGGTACGTAAGTAATGTGTATATATAAATTATTAAATCCGAGTGGAATTGAAACACATTCAATTCAACAGTGTAAGTAATTTATGCATACACATATATAGAAGAACTTCATCTGAATTGAGAAAGAATCTGAAATAGTTAAAGGGTT

mRNA sequence

ATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGA

Coding sequence (CDS)

ATGCTTCAATCACCTCTTACGTGTACGCAATTCTTTCTCATTTCTTCTATTTCACTGTTCATATTCTTCCAAAGAAATTCTCTCCAATCTTCTTCCATGGCTGCGTCGCCACGCTCCCTTCGCTACCAATTCCGCTCCTCCTTGCCCGACGTTCCCCCGCGATCGCCGTCTCTTTCCGTTTCTTTTCCCAAACTTAAGCCTGCGGATTCGGAAACTACCTCGAAGATTGTTCTACAGCCTCGTTTATGCACTCTCAGATCCTTCGGATCCGATCCGCTCGTTCCTATCAAGTCTAAGAGAGTATCCACTCGAGACGATGCTACAAACGACGACGTTTCTCCGTTCTTTGCGACTCTGTCGGAGTACATAGAGAGTTCGAAGGACAGCCATGAATTCGAGATCATTTCCGGCCGCCTCGCTATGATTGTGTTTGCGGCGACTGTAGCAATGGAGGTAGTCACCGGAAATTCAGTATTCAGAAAGATGGATCTGGAAGGGATTGAGGAAGGATTAGGAGTATGTTTGGGCGCCGTTACTCTGGCGACCATTTTTGCGTTCTCCTCCAACGCTCGAAACAGAGTAGGTCGAATCTTCAGCATCAGCTGCACTACCTTCATCGATTCGCTTATTGACCAGATCGTCGACGGTCTTTTCTACGAAAACGACACCGGCGATTGGTCCGACGACATTTGA

Protein sequence

MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSVSFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI*
BLAST of Csa6G487600 vs. Swiss-Prot
Match: STEP2_ARATH (Stress enhanced protein 2, chloroplastic OS=Arabidopsis thaliana GN=SEP2 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.2e-48
Identity = 105/206 (50.97%), Postives = 135/206 (65.53%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--------KLKPADSETTSKIVLQPRLCT 92
           MA + R++RYQ    LP    R+P    S P        + +  D     KIVLQPRLCT
Sbjct: 1   MAMATRAIRYQ----LPSPRFRAPRCESSEPIKQIQIQQRPRGGDLAENGKIVLQPRLCT 60

Query: 93  LRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVF 152
           LRS+GSD ++  K         +  +  SPFF TL++YIESSK S +FE ISGRLAMIVF
Sbjct: 61  LRSYGSDMVIAKKDGGDGGGGGSDVELASPFFETLTDYIESSKKSQDFETISGRLAMIVF 120

Query: 153 AATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTT 212
           A TV  E+VTGNS+F+K+D+EG+ E +G  L A+  A +FA+ + +RNRVGRIF++SC +
Sbjct: 121 AVTVTEEIVTGNSLFKKLDVEGLSEAIGAGLAAMGCAAMFAWLTISRNRVGRIFTVSCNS 180

Query: 213 FIDSLIDQIVDGLFYENDTGDWSDDI 231
           FIDSL+DQIVDGLFY+    DWSDD+
Sbjct: 181 FIDSLVDQIVDGLFYDTKPSDWSDDL 202

BLAST of Csa6G487600 vs. TrEMBL
Match: A0A0A0KI08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487600 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.2e-123
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60
           MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV
Sbjct: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60

Query: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120
           SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS
Sbjct: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120

Query: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180
           EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL
Sbjct: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180

Query: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 231
           ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI
Sbjct: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 230

BLAST of Csa6G487600 vs. TrEMBL
Match: A0A151QWU1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_044293 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 9.5e-59
Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSE-TTSKIVLQPRLCTLRSFG 92
           MA+  R  R + R     V PR P   + VS PK K A++E T + IVLQPRLCTLRS+G
Sbjct: 1   MASVTRVARCELRPGRAAVRPREPGGPVPVSIPKPKAAEAEGTNANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    IKS+          DDVSPFFATLSEYIESSK SH+FEIISGRLAM+VFAATV 
Sbjct: 61  SDRGGVIKSR----------DDVSPFFATLSEYIESSKKSHDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           ME+VTGNSVFRKMD+EGI E  GVCLGAVT A +FA+ S+ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEMVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFSSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQIVDGLFYE D   WSD+
Sbjct: 181 IDQIVDGLFYEGDPTHWSDE 190

BLAST of Csa6G487600 vs. TrEMBL
Match: A0A0B2RAE6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008444 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58
Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSETT-SKIVLQPRLCTLRSFG 92
           MA++ R +  + RS+ P V PR P+  + V+ PK KP  +E   + IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    +    + TR +  +DDVSPFFA LS+YIESSK S +FEIISGRLAM+VFAATV 
Sbjct: 61  SDRAGVL----IKTRKEGDHDDVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           MEVVTGNSVFRKMD+EGI E  GVCLGAVT A +FA+  +ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEVVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQI+DGLFYE D  DW D+
Sbjct: 181 IDQIIDGLFYEGDPTDWPDE 196

BLAST of Csa6G487600 vs. TrEMBL
Match: I1KT92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G141300 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58
Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSETT-SKIVLQPRLCTLRSFG 92
           MA++ R +  + RS+ P V PR P+  + V+ PK KP  +E   + IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    +    + TR +  +DDVSPFFA LS+YIESSK S +FEIISGRLAM+VFAATV 
Sbjct: 61  SDRAGVL----IKTRKEGDHDDVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           MEVVTGNSVFRKMD+EGI E  GVCLGAVT A +FA+  +ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEVVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQI+DGLFYE D  DW D+
Sbjct: 181 IDQIIDGLFYEGDPTDWPDE 196

BLAST of Csa6G487600 vs. TrEMBL
Match: A0A067KTV2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09398 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-58
Identity = 126/200 (63.00%), Postives = 148/200 (74.00%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--KLKPADSETTSKIVLQPRLCTLRSFGS 92
           MA   R++  Q     P V  R  ++SV  P  K+K  ++E T KI+LQPRLCTLRS+G 
Sbjct: 1   MARVARAIHCQLNVEKPAVLRRDSAVSVQAPAPKIKQGETENT-KIMLQPRLCTLRSYGE 60

Query: 93  DPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAM 152
           D    +K KR         D+VSPFF TLS+YIESSK SH+FEIISGRLAMIVFA TVA 
Sbjct: 61  DRFGVVKMKRDG------GDEVSPFFDTLSDYIESSKKSHDFEIISGRLAMIVFAVTVAT 120

Query: 153 EVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLI 212
           EVVTGNSVFRKMDL+GI E  G+CLGAVT A +FA+ S+ARNRVGRIF+ SC TFIDSLI
Sbjct: 121 EVVTGNSVFRKMDLQGIAEAAGICLGAVTSAAVFAWFSSARNRVGRIFTSSCNTFIDSLI 180

Query: 213 DQIVDGLFYENDTGDWSDDI 231
           D+IVDGLFYE++  DWSDDI
Sbjct: 181 DEIVDGLFYESELSDWSDDI 193

BLAST of Csa6G487600 vs. TAIR10
Match: AT2G21970.1 (AT2G21970.1 stress enhanced protein 2)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49
Identity = 105/206 (50.97%), Postives = 135/206 (65.53%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--------KLKPADSETTSKIVLQPRLCT 92
           MA + R++RYQ    LP    R+P    S P        + +  D     KIVLQPRLCT
Sbjct: 1   MAMATRAIRYQ----LPSPRFRAPRCESSEPIKQIQIQQRPRGGDLAENGKIVLQPRLCT 60

Query: 93  LRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVF 152
           LRS+GSD ++  K         +  +  SPFF TL++YIESSK S +FE ISGRLAMIVF
Sbjct: 61  LRSYGSDMVIAKKDGGDGGGGGSDVELASPFFETLTDYIESSKKSQDFETISGRLAMIVF 120

Query: 153 AATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTT 212
           A TV  E+VTGNS+F+K+D+EG+ E +G  L A+  A +FA+ + +RNRVGRIF++SC +
Sbjct: 121 AVTVTEEIVTGNSLFKKLDVEGLSEAIGAGLAAMGCAAMFAWLTISRNRVGRIFTVSCNS 180

Query: 213 FIDSLIDQIVDGLFYENDTGDWSDDI 231
           FIDSL+DQIVDGLFY+    DWSDD+
Sbjct: 181 FIDSLVDQIVDGLFYDTKPSDWSDDL 202

BLAST of Csa6G487600 vs. NCBI nr
Match: gi|449448410|ref|XP_004141959.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 4.6e-123
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60
           MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV
Sbjct: 1   MLQSPLTCTQFFLISSISLFIFFQRNSLQSSSMAASPRSLRYQFRSSLPDVPPRSPSLSV 60

Query: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120
           SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS
Sbjct: 61  SFPKLKPADSETTSKIVLQPRLCTLRSFGSDPLVPIKSKRVSTRDDATNDDVSPFFATLS 120

Query: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180
           EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL
Sbjct: 121 EYIESSKDSHEFEIISGRLAMIVFAATVAMEVVTGNSVFRKMDLEGIEEGLGVCLGAVTL 180

Query: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 231
           ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI
Sbjct: 181 ATIFAFSSNARNRVGRIFSISCTTFIDSLIDQIVDGLFYENDTGDWSDDI 230

BLAST of Csa6G487600 vs. NCBI nr
Match: gi|659079234|ref|XP_008440147.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFPKLKPADSETTSKIVLQPRLCTLRSFGSDP 92
           MAA PRS+ YQFRSSLPDVPPRSPSLSVS PKLKPADSETT KIVLQPRLCTLRSFGSDP
Sbjct: 1   MAAPPRSVHYQFRSSLPDVPPRSPSLSVSLPKLKPADSETTPKIVLQPRLCTLRSFGSDP 60

Query: 93  LVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAMEV 152
           LVPIK+KRVSTRDDA+ND+VSPFF TLSEYIESSKDSHEFEIISGRLAMIVFAATV MEV
Sbjct: 61  LVPIKTKRVSTRDDASNDEVSPFFVTLSEYIESSKDSHEFEIISGRLAMIVFAATVTMEV 120

Query: 153 VTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLIDQ 212
           VTGNSVFRKMDLEGIEE LGVCLGAVTLA IFAFSSNARNRVGRIFSISC TFIDSLIDQ
Sbjct: 121 VTGNSVFRKMDLEGIEEALGVCLGAVTLAAIFAFSSNARNRVGRIFSISCNTFIDSLIDQ 180

Query: 213 IVDGLFYENDTGDWSDD 230
           IVDGLFYENDTGDWSDD
Sbjct: 181 IVDGLFYENDTGDWSDD 197

BLAST of Csa6G487600 vs. NCBI nr
Match: gi|1012322405|gb|KYP34719.1| (hypothetical protein KK1_044293 [Cajanus cajan])

HSP 1 Score: 235.0 bits (598), Expect = 1.4e-58
Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSE-TTSKIVLQPRLCTLRSFG 92
           MA+  R  R + R     V PR P   + VS PK K A++E T + IVLQPRLCTLRS+G
Sbjct: 1   MASVTRVARCELRPGRAAVRPREPGGPVPVSIPKPKAAEAEGTNANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    IKS+          DDVSPFFATLSEYIESSK SH+FEIISGRLAM+VFAATV 
Sbjct: 61  SDRGGVIKSR----------DDVSPFFATLSEYIESSKKSHDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           ME+VTGNSVFRKMD+EGI E  GVCLGAVT A +FA+ S+ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEMVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFSSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQIVDGLFYE D   WSD+
Sbjct: 181 IDQIVDGLFYEGDPTHWSDE 190

BLAST of Csa6G487600 vs. NCBI nr
Match: gi|356525533|ref|XP_003531379.1| (PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max])

HSP 1 Score: 234.6 bits (597), Expect = 1.8e-58
Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPS--LSVSFPKLKPADSETT-SKIVLQPRLCTLRSFG 92
           MA++ R +  + RS+ P V PR P+  + V+ PK KP  +E   + IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 93  SDPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVA 152
           SD    +    + TR +  +DDVSPFFA LS+YIESSK S +FEIISGRLAM+VFAATV 
Sbjct: 61  SDRAGVL----IKTRKEGDHDDVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVT 120

Query: 153 MEVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSL 212
           MEVVTGNSVFRKMD+EGI E  GVCLGAVT A +FA+  +ARNRVGRIF++SC  FIDS+
Sbjct: 121 MEVVTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSV 180

Query: 213 IDQIVDGLFYENDTGDWSDD 230
           IDQI+DGLFYE D  DW D+
Sbjct: 181 IDQIIDGLFYEGDPTDWPDE 196

BLAST of Csa6G487600 vs. NCBI nr
Match: gi|802615505|ref|XP_012075221.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Jatropha curcas])

HSP 1 Score: 232.3 bits (591), Expect = 8.8e-58
Identity = 126/200 (63.00%), Postives = 148/200 (74.00%), Query Frame = 1

Query: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFP--KLKPADSETTSKIVLQPRLCTLRSFGS 92
           MA   R++  Q     P V  R  ++SV  P  K+K  ++E T KI+LQPRLCTLRS+G 
Sbjct: 1   MARVARAIHCQLNVEKPAVLRRDSAVSVQAPAPKIKQGETENT-KIMLQPRLCTLRSYGE 60

Query: 93  DPLVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAM 152
           D    +K KR         D+VSPFF TLS+YIESSK SH+FEIISGRLAMIVFA TVA 
Sbjct: 61  DRFGVVKMKRDG------GDEVSPFFDTLSDYIESSKKSHDFEIISGRLAMIVFAVTVAT 120

Query: 153 EVVTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLI 212
           EVVTGNSVFRKMDL+GI E  G+CLGAVT A +FA+ S+ARNRVGRIF+ SC TFIDSLI
Sbjct: 121 EVVTGNSVFRKMDLQGIAEAAGICLGAVTSAAVFAWFSSARNRVGRIFTSSCNTFIDSLI 180

Query: 213 DQIVDGLFYENDTGDWSDDI 231
           D+IVDGLFYE++  DWSDDI
Sbjct: 181 DEIVDGLFYESELSDWSDDI 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
STEP2_ARATH2.2e-4850.97Stress enhanced protein 2, chloroplastic OS=Arabidopsis thaliana GN=SEP2 PE=2 SV... [more]
Match NameE-valueIdentityDescription
A0A0A0KI08_CUCSA3.2e-123100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487600 PE=4 SV=1[more]
A0A151QWU1_CAJCA9.5e-5965.00Uncharacterized protein OS=Cajanus cajan GN=KK1_044293 PE=4 SV=1[more]
A0A0B2RAE6_GLYSO1.2e-5862.00Uncharacterized protein OS=Glycine soja GN=glysoja_008444 PE=4 SV=1[more]
I1KT92_SOYBN1.2e-5862.00Uncharacterized protein OS=Glycine max GN=GLYMA_08G141300 PE=4 SV=1[more]
A0A067KTV2_JATCU6.1e-5863.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09398 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G21970.11.2e-4950.97 stress enhanced protein 2[more]
Match NameE-valueIdentityDescription
gi|449448410|ref|XP_004141959.1|4.6e-123100.00PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis sativus][more]
gi|659079234|ref|XP_008440147.1|1.1e-9793.40PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis melo][more]
gi|1012322405|gb|KYP34719.1|1.4e-5865.00hypothetical protein KK1_044293 [Cajanus cajan][more]
gi|356525533|ref|XP_003531379.1|1.8e-5862.00PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max][more]
gi|802615505|ref|XP_012075221.1|8.8e-5863.00PREDICTED: stress enhanced protein 2, chloroplastic [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0005575 cellular_component
cellular_component GO:0000151 ubiquitin ligase complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0034450 ubiquitin-ubiquitin ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016168 chlorophyll binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU090225cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G487600.1Csa6G487600.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU090225CU090225transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 118..160
score: 1.9
NoneNo IPR availablePANTHERPTHR36490FAMILY NOT NAMEDcoord: 33..230
score: 1.1

The following gene(s) are paralogous to this gene:

None