CmaCh07G007560 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G007560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Stress enhanced protein 2
Location	Cma_Chr07 : 3355422 .. 3356798 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAATAGTATTCCTCCCTTATAAACCTATGATCTTTTACTAAATTAAATAAAGTAACACTCATTCTCGGTAATTATCAACAATACTCTCCTTAGACAAAGTACACTATTTGAGATATTATTATTATTATTAATATTTTGTTGGGAGATAGGTTGCGTGTGTCGTCACCCAACTGAAATGAAACCCCGCCGCCACGAACAGTCCTATCCCTCCTCCTATTCAATCCCTCCACTGCACATTCCTTCAAGCCCACATCTCTCCCATGGCGGCGCCGGCATGTTCTCTTCACTGCCAGTTTCGATCCTCCTTGCCTGACGTCCCGACCAGCTTACCGCCCGCTTCCGTTTCAGTTCCTAAACTAAAGTCCGCAGAGAGCCCAAAGATCGTTCTACAGCCCCGCTTATGCACTCTCAGATCCTTCGGATCGGATCCGATTGTTCCTATCAAAGCTAAGAGAGTAGGCGACGACGACGCCGACGTTTCTCCGTTCTTCGCGACTCTGTCTGAGTACATAAAGACCTCGAAGGACAGCCATGAATTCGAAATCATCTCCGGTCGTCTCGCCATGGTGAGTTCTAGGTTTCATATTGAAATGAAAATTCGTTTTCGTATACATCAAAATATCTATCATGTTTCGAAATCGACAATTAGGAACTGAAATAACCTCTTACTGATTCCTGCTGTGAATAGTTTTTAATCAAATTAAATATCACGAACTTCATCAATCACCTTCGGAAACATCACAAATTACGATACCTAAAATTATCGCCACAAGGACATCTCAGAATCCAATTAATTTGCAGATTGTGTTTGCGGCGACCGTAACAATGGAGGTGTTGACGGGAAATTCAGTGTTCAGAAAGATGGATTTGGAAGGTATTGAGGAAGCAGCAGGAATCTGTTTGGGCGCTGTCATTATGGCGGCCATTTTCGCTTTCTCCTCCAACGCCCGAAACAGAGTAGGTCGAATCTTCAGCATCGGCTGCAACACCTTCATCGATTCGCTTATTGACCAGATCGTGGACGGCCTTTTCTACGAAATCAATCCCGGCGACTGGTCCGATGACGTTTGAAATCTCCGCCCAAATCAGAGGTATGAAGTATGTATATATAAATTCAATATATAACTTGTTTGAACAATTTGTATGATTGAAGCGTGACTTGATTACATAAAAATTGGTAAATATAACACACATAATATACTATATTATACAACTAAATTCACTTTTTATGTGTTTGGATGATGACAGTCCCACCTCTGCTAATTTAGATAATGACCATAAATTTATAAACAAAAAAATACTAGCTTAATTGGTATGAGGCCTTTTGGGAAGCCCAAATAAAGCCATGATAATGACAGTCCCACCTCTGCTAAT

mRNA sequence

CAGAAATAGTATTCCTCCCTTATAAACCTATGATCTTTTACTAAATTAAATAAAGTAACACTCATTCTCGGTAATTATCAACAATACTCTCCTTAGACAAAGTACACTATTTGAGATATTATTATTATTATTAATATTTTGTTGGGAGATAGGTTGCGTGTGTCGTCACCCAACTGAAATGAAACCCCGCCGCCACGAACAGTCCTATCCCTCCTCCTATTCAATCCCTCCACTGCACATTCCTTCAAGCCCACATCTCTCCCATGGCGGCGCCGGCATGTTCTCTTCACTGCCAGTTTCGATCCTCCTTGCCTGACGTCCCGACCAGCTTACCGCCCGCTTCCGTTTCAGTTCCTAAACTAAAGTCCGCAGAGAGCCCAAAGATCGTTCTACAGCCCCGCTTATGCACTCTCAGATCCTTCGGATCGGATCCGATTGTTCCTATCAAAGCTAAGAGAGTAGGCGACGACGACGCCGACGTTTCTCCGTTCTTCGCGACTCTGTCTGAGTACATAAAGACCTCGAAGGACAGCCATGAATTCGAAATCATCTCCGGTCGTCTCGCCATGATTGTGTTTGCGGCGACCGTAACAATGGAGGTGTTGACGGGAAATTCAGTGTTCAGAAAGATGGATTTGGAAGGTATTGAGGAAGCAGCAGGAATCTGTTTGGGCGCTGTCATTATGGCGGCCATTTTCGCTTTCTCCTCCAACGCCCGAAACAGAGTAGGTCGAATCTTCAGCATCGGCTGCAACACCTTCATCGATTCGCTTATTGACCAGATCGTGGACGGCCTTTTCTACGAAATCAATCCCGGCGACTGGTCCGATGACGTTTGAAATCTCCGCCCAAATCAGAGGTATGAAGTATGTATATATAAATTCAATATATAACTTGTTTGAACAATTTGTATGATTGAAGCGTGACTTGATTACATAAAAATTGGTAAATATAACACACATAATATACTATATTATACAACTAAATTCACTTTTTATGTGTTTGGATGATGACAGTCCCACCTCTGCTAATTTAGATAATGACCATAAATTTATAAACAAAAAAATACTAGCTTAATTGGTATGAGGCCTTTTGGGAAGCCCAAATAAAGCCATGATAATGACAGTCCCACCTCTGCTAAT

Coding sequence (CDS)

ATGGCGGCGCCGGCATGTTCTCTTCACTGCCAGTTTCGATCCTCCTTGCCTGACGTCCCGACCAGCTTACCGCCCGCTTCCGTTTCAGTTCCTAAACTAAAGTCCGCAGAGAGCCCAAAGATCGTTCTACAGCCCCGCTTATGCACTCTCAGATCCTTCGGATCGGATCCGATTGTTCCTATCAAAGCTAAGAGAGTAGGCGACGACGACGCCGACGTTTCTCCGTTCTTCGCGACTCTGTCTGAGTACATAAAGACCTCGAAGGACAGCCATGAATTCGAAATCATCTCCGGTCGTCTCGCCATGATTGTGTTTGCGGCGACCGTAACAATGGAGGTGTTGACGGGAAATTCAGTGTTCAGAAAGATGGATTTGGAAGGTATTGAGGAAGCAGCAGGAATCTGTTTGGGCGCTGTCATTATGGCGGCCATTTTCGCTTTCTCCTCCAACGCCCGAAACAGAGTAGGTCGAATCTTCAGCATCGGCTGCAACACCTTCATCGATTCGCTTATTGACCAGATCGTGGACGGCCTTTTCTACGAAATCAATCCCGGCGACTGGTCCGATGACGTTTGA

Protein sequence

MAAPACSLHCQFRSSLPDVPTSLPPASVSVPKLKSAESPKIVLQPRLCTLRSFGSDPIVPIKAKRVGDDDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEVLTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQIVDGLFYEINPGDWSDDV

Homology

[Close]

BLAST of CmaCh07G007560 vs. Swiss-Prot
Match: STEP2_ARATH (Stress enhanced protein 2, chloroplastic OS=Arabidopsis thaliana GN=SEP2 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.8e-48
Identity = 100/163 (61.35%), Postives = 129/163 (79.14%), Query Frame = 1


Query: 36  AESPKIVLQPRLCTLRSFGSDPIVPIKAKRVGDDD----ADV---SPFFATLSEYIKTSK 95
           AE+ KIVLQPRLCTLRS+GSD ++   AK+ G D     +DV   SPFF TL++YI++SK
Sbjct: 43  AENGKIVLQPRLCTLRSYGSDMVI---AKKDGGDGGGGGSDVELASPFFETLTDYIESSK 102

Query: 96  DSHEFEIISGRLAMIVFAATVTMEVLTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFS 155
            S +FE ISGRLAMIVFA TVT E++TGNS+F+K+D+EG+ EA G  L A+  AA+FA+ 
Sbjct: 103 KSQDFETISGRLAMIVFAVTVTEEIVTGNSLFKKLDVEGLSEAIGAGLAAMGCAAMFAWL 162

Query: 156 SNARNRVGRIFSIGCNTFIDSLIDQIVDGLFYEINPGDWSDDV 192
           + +RNRVGRIF++ CN+FIDSL+DQIVDGLFY+  P DWSDD+
Sbjct: 163 TISRNRVGRIFTVSCNSFIDSLVDQIVDGLFYDTKPSDWSDDL 202

[Close]

BLAST of CmaCh07G007560 vs. TrEMBL
Match: A0A0A0KI08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487600 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.0e-75
Identity = 157/198 (79.29%), Postives = 167/198 (84.34%), Query Frame = 1


Query: 1   MAAPACSLHCQFRSSLPDVPTSLPPASVSVPKLKSAESP---KIVLQPRLCTLRSFGSDP 60
           MAA   SL  QFRSSLPDVP   P  SVS PKLK A+S    KIVLQPRLCTLRSFGSDP
Sbjct: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFPKLKPADSETTSKIVLQPRLCTLRSFGSDP 92

Query: 61  IVPIKAKRVGD-DDA---DVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEV 120
           +VPIK+KRV   DDA   DVSPFFATLSEYI++SKDSHEFEIISGRLAMIVFAATV MEV
Sbjct: 93  LVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAMEV 152

Query: 121 LTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQ 180
           +TGNSVFRKMDLEGIEE  G+CLGAV +A IFAFSSNARNRVGRIFSI C TFIDSLIDQ
Sbjct: 153 VTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLIDQ 212

Query: 181 IVDGLFYEINPGDWSDDV 192
           IVDGLFYE + GDWSDD+
Sbjct: 213 IVDGLFYENDTGDWSDDI 230

[Close]

BLAST of CmaCh07G007560 vs. TrEMBL
Match: I1K4P7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G183500 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.8e-59
Identity = 128/196 (65.31%), Postives = 157/196 (80.10%), Query Frame = 1


Query: 1   MAAPACSLHCQFRSSLPDVPTSLP--PASVSVPKLKSAESP--KIVLQPRLCTLRSFGSD 60
           MA+    +HC+ RS+ P V    P  P  V++PK K+AE+    IVLQPRLCTLRS+GSD
Sbjct: 11  MASATRLVHCELRSARPAVRAREPAGPVQVTIPKPKAAEAEGANIVLQPRLCTLRSYGSD 70

Query: 61  PI-VPIKAKRVGDDDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEVLT 120
              V IKA++ GDDD DVSPFFA LS+YI++SK SH+FEIISGRLAM+VFAATVTME++T
Sbjct: 71  RAGVLIKARKEGDDD-DVSPFFAALSDYIESSKKSHDFEIISGRLAMMVFAATVTMEMVT 130

Query: 121 GNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQIV 180
           GNS+FRKMD+EGI EA G+CLGAV  AA+FA+ S+ARNRVGRIF++ CN FIDS+IDQIV
Sbjct: 131 GNSMFRKMDIEGITEAGGVCLGAVTCAALFAWFSSARNRVGRIFTVSCNAFIDSVIDQIV 190

Query: 181 DGLFYE-INPGDWSDD 191
           DGLFYE  +P DW D+
Sbjct: 191 DGLFYEGDDPTDWPDE 205

[Close]

BLAST of CmaCh07G007560 vs. TrEMBL
Match: B9H5A9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s08610g PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-58
Identity = 129/197 (65.48%), Postives = 152/197 (77.16%), Query Frame = 1


Query: 5   ACSLHCQFRSSLPDVPT----SLPPASVSVPKLKS--AESPKIVLQPRLCTLRSFGSDPI 64
           A +++CQ     PDV +    +  P  V VPK+K+  AE+ KIVLQPRLCTLRS+G D  
Sbjct: 6   ARAINCQLVDKKPDVFSREAGAAVPVQVPVPKIKANIAENGKIVLQPRLCTLRSYGQDGF 65

Query: 65  VPIKA---KRVGD-DDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEVL 124
             +K    K  GD DD  VSPFF TLSEYI++SK S +FEIISGRLAMIVFAATVT EV+
Sbjct: 66  GVVKTSSRKDSGDHDDQVVSPFFETLSEYIESSKKSRDFEIISGRLAMIVFAATVTTEVV 125

Query: 125 TGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQI 184
           TGN+VFRKMDL GIEEA G+CLGAV  AAIFA+ S+ARNRVGRIF+IGCNTFIDSLID+I
Sbjct: 126 TGNTVFRKMDLVGIEEAVGVCLGAVTCAAIFAWFSSARNRVGRIFTIGCNTFIDSLIDEI 185

Query: 185 VDGLFYEINPGDWSDDV 192
           VDGLFY+  P DWSD++
Sbjct: 186 VDGLFYDTEPSDWSDEI 202

[Close]

BLAST of CmaCh07G007560 vs. TrEMBL
Match: A0A0B2RAE6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008444 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.5e-57
Identity = 125/197 (63.45%), Postives = 151/197 (76.65%), Query Frame = 1


Query: 1   MAAPACSLHCQFRSSLPDVPTSLP--PASVSVPKLK----SAESPKIVLQPRLCTLRSFG 60
           MA+    +HC+ RS+ P V    P  P  V++PK K     AE   IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 61  SDPI-VPIKAKRVGDDDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEV 120
           SD   V IK ++ GD D DVSPFFA LS+YI++SK S +FEIISGRLAM+VFAATVTMEV
Sbjct: 61  SDRAGVLIKTRKEGDHD-DVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVTMEV 120

Query: 121 LTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQ 180
           +TGNSVFRKMD+EGI EA G+CLGAV  AA+FA+  +ARNRVGRIF++ CN FIDS+IDQ
Sbjct: 121 VTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSVIDQ 180

Query: 181 IVDGLFYEINPGDWSDD 191
           I+DGLFYE +P DW D+
Sbjct: 181 IIDGLFYEGDPTDWPDE 196

[Close]

BLAST of CmaCh07G007560 vs. TrEMBL
Match: I1KT92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G141300 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.5e-57
Identity = 125/197 (63.45%), Postives = 151/197 (76.65%), Query Frame = 1


Query: 1   MAAPACSLHCQFRSSLPDVPTSLP--PASVSVPKLK----SAESPKIVLQPRLCTLRSFG 60
           MA+    +HC+ RS+ P V    P  P  V++PK K     AE   IVLQPRLCTLRS+G
Sbjct: 1   MASATRLVHCELRSARPAVRPREPAGPVQVTIPKPKPKAAEAEGANIVLQPRLCTLRSYG 60

Query: 61  SDPI-VPIKAKRVGDDDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEV 120
           SD   V IK ++ GD D DVSPFFA LS+YI++SK S +FEIISGRLAM+VFAATVTMEV
Sbjct: 61  SDRAGVLIKTRKEGDHD-DVSPFFAALSDYIESSKKSQDFEIISGRLAMMVFAATVTMEV 120

Query: 121 LTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQ 180
           +TGNSVFRKMD+EGI EA G+CLGAV  AA+FA+  +ARNRVGRIF++ CN FIDS+IDQ
Sbjct: 121 VTGNSVFRKMDIEGITEAGGVCLGAVTCAALFAWFCSARNRVGRIFTVSCNAFIDSVIDQ 180

Query: 181 IVDGLFYEINPGDWSDD 191
           I+DGLFYE +P DW D+
Sbjct: 181 IIDGLFYEGDPTDWPDE 196

[Close]

BLAST of CmaCh07G007560 vs. TAIR10
Match: AT2G21970.1 (AT2G21970.1 stress enhanced protein 2)

HSP 1 Score: 191.8 bits (486), Expect = 3.8e-49
Identity = 100/163 (61.35%), Postives = 129/163 (79.14%), Query Frame = 1


Query: 36  AESPKIVLQPRLCTLRSFGSDPIVPIKAKRVGDDD----ADV---SPFFATLSEYIKTSK 95
           AE+ KIVLQPRLCTLRS+GSD ++   AK+ G D     +DV   SPFF TL++YI++SK
Sbjct: 43  AENGKIVLQPRLCTLRSYGSDMVI---AKKDGGDGGGGGSDVELASPFFETLTDYIESSK 102

Query: 96  DSHEFEIISGRLAMIVFAATVTMEVLTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFS 155
            S +FE ISGRLAMIVFA TVT E++TGNS+F+K+D+EG+ EA G  L A+  AA+FA+ 
Sbjct: 103 KSQDFETISGRLAMIVFAVTVTEEIVTGNSLFKKLDVEGLSEAIGAGLAAMGCAAMFAWL 162

Query: 156 SNARNRVGRIFSIGCNTFIDSLIDQIVDGLFYEINPGDWSDDV 192
           + +RNRVGRIF++ CN+FIDSL+DQIVDGLFY+  P DWSDD+
Sbjct: 163 TISRNRVGRIFTVSCNSFIDSLVDQIVDGLFYDTKPSDWSDDL 202

[Close]

BLAST of CmaCh07G007560 vs. NCBI nr
Match: gi|659079234|ref|XP_008440147.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 3.7e-78
Identity = 161/197 (81.73%), Postives = 172/197 (87.31%), Query Frame = 1


Query: 1   MAAPACSLHCQFRSSLPDVPTSLPPASVSVPKLKSAES---PKIVLQPRLCTLRSFGSDP 60
           MAAP  S+H QFRSSLPDVP   P  SVS+PKLK A+S   PKIVLQPRLCTLRSFGSDP
Sbjct: 1   MAAPPRSVHYQFRSSLPDVPPRSPSLSVSLPKLKPADSETTPKIVLQPRLCTLRSFGSDP 60

Query: 61  IVPIKAKRVGD-DDA---DVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEV 120
           +VPIK KRV   DDA   +VSPFF TLSEYI++SKDSHEFEIISGRLAMIVFAATVTMEV
Sbjct: 61  LVPIKTKRVSTRDDASNDEVSPFFVTLSEYIESSKDSHEFEIISGRLAMIVFAATVTMEV 120

Query: 121 LTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQ 180
           +TGNSVFRKMDLEGIEEA G+CLGAV +AAIFAFSSNARNRVGRIFSI CNTFIDSLIDQ
Sbjct: 121 VTGNSVFRKMDLEGIEEALGVCLGAVTLAAIFAFSSNARNRVGRIFSISCNTFIDSLIDQ 180

Query: 181 IVDGLFYEINPGDWSDD 191
           IVDGLFYE + GDWSDD
Sbjct: 181 IVDGLFYENDTGDWSDD 197

[Close]

BLAST of CmaCh07G007560 vs. NCBI nr
Match: gi|449448410|ref|XP_004141959.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 8.5e-75
Identity = 157/198 (79.29%), Postives = 167/198 (84.34%), Query Frame = 1


Query: 1   MAAPACSLHCQFRSSLPDVPTSLPPASVSVPKLKSAESP---KIVLQPRLCTLRSFGSDP 60
           MAA   SL  QFRSSLPDVP   P  SVS PKLK A+S    KIVLQPRLCTLRSFGSDP
Sbjct: 33  MAASPRSLRYQFRSSLPDVPPRSPSLSVSFPKLKPADSETTSKIVLQPRLCTLRSFGSDP 92

Query: 61  IVPIKAKRVGD-DDA---DVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEV 120
           +VPIK+KRV   DDA   DVSPFFATLSEYI++SKDSHEFEIISGRLAMIVFAATV MEV
Sbjct: 93  LVPIKSKRVSTRDDATNDDVSPFFATLSEYIESSKDSHEFEIISGRLAMIVFAATVAMEV 152

Query: 121 LTGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQ 180
           +TGNSVFRKMDLEGIEE  G+CLGAV +A IFAFSSNARNRVGRIFSI C TFIDSLIDQ
Sbjct: 153 VTGNSVFRKMDLEGIEEGLGVCLGAVTLATIFAFSSNARNRVGRIFSISCTTFIDSLIDQ 212

Query: 181 IVDGLFYEINPGDWSDDV 192
           IVDGLFYE + GDWSDD+
Sbjct: 213 IVDGLFYENDTGDWSDDI 230

[Close]

BLAST of CmaCh07G007560 vs. NCBI nr
Match: gi|743823341|ref|XP_011021934.1| (PREDICTED: stress enhanced protein 2, chloroplastic [Populus euphratica])

HSP 1 Score: 235.7 bits (600), Expect = 6.6e-59
Identity = 130/197 (65.99%), Postives = 153/197 (77.66%), Query Frame = 1


Query: 5   ACSLHCQFRSSLPDVPT----SLPPASVSVPKLKS--AESPKIVLQPRLCTLRSFGSDPI 64
           A +++CQ     PDV +    +  P  V VPK+K+  AE+ KIVLQPRLCTLRS+G D  
Sbjct: 6   ARAINCQLVDKKPDVFSREAGAAIPVQVPVPKIKANIAENGKIVLQPRLCTLRSYGQDGF 65

Query: 65  VPIKA---KRVGD-DDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEVL 124
             +K    K  GD DD  VSPFF TLSEYI++SK S +FEIISGRLAMIVFAATVT EV+
Sbjct: 66  GVVKTSSRKDSGDHDDQVVSPFFETLSEYIESSKKSRDFEIISGRLAMIVFAATVTTEVI 125

Query: 125 TGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQI 184
           TGN+VFRKMDLEGIEEA G+CLGAV  AAIFA+ S+ARNRVGRIF+IGCNTFIDSLID+I
Sbjct: 126 TGNTVFRKMDLEGIEEAVGVCLGAVTCAAIFAWFSSARNRVGRIFTIGCNTFIDSLIDEI 185

Query: 185 VDGLFYEINPGDWSDDV 192
           VDGLFY+  P DWSD++
Sbjct: 186 VDGLFYDTEPSDWSDEI 202

[Close]

BLAST of CmaCh07G007560 vs. NCBI nr
Match: gi|356512744|ref|XP_003525076.1| (PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max])

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 128/196 (65.31%), Postives = 157/196 (80.10%), Query Frame = 1


Query: 1   MAAPACSLHCQFRSSLPDVPTSLP--PASVSVPKLKSAESP--KIVLQPRLCTLRSFGSD 60
           MA+    +HC+ RS+ P V    P  P  V++PK K+AE+    IVLQPRLCTLRS+GSD
Sbjct: 11  MASATRLVHCELRSARPAVRAREPAGPVQVTIPKPKAAEAEGANIVLQPRLCTLRSYGSD 70

Query: 61  PI-VPIKAKRVGDDDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEVLT 120
              V IKA++ GDDD DVSPFFA LS+YI++SK SH+FEIISGRLAM+VFAATVTME++T
Sbjct: 71  RAGVLIKARKEGDDD-DVSPFFAALSDYIESSKKSHDFEIISGRLAMMVFAATVTMEMVT 130

Query: 121 GNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQIV 180
           GNS+FRKMD+EGI EA G+CLGAV  AA+FA+ S+ARNRVGRIF++ CN FIDS+IDQIV
Sbjct: 131 GNSMFRKMDIEGITEAGGVCLGAVTCAALFAWFSSARNRVGRIFTVSCNAFIDSVIDQIV 190

Query: 181 DGLFYE-INPGDWSDD 191
           DGLFYE  +P DW D+
Sbjct: 191 DGLFYEGDDPTDWPDE 205

[Close]

BLAST of CmaCh07G007560 vs. NCBI nr
Match: gi|224081248|ref|XP_002306351.1| (hypothetical protein POPTR_0005s08610g [Populus trichocarpa])

HSP 1 Score: 233.0 bits (593), Expect = 4.3e-58
Identity = 129/197 (65.48%), Postives = 152/197 (77.16%), Query Frame = 1


Query: 5   ACSLHCQFRSSLPDVPT----SLPPASVSVPKLKS--AESPKIVLQPRLCTLRSFGSDPI 64
           A +++CQ     PDV +    +  P  V VPK+K+  AE+ KIVLQPRLCTLRS+G D  
Sbjct: 6   ARAINCQLVDKKPDVFSREAGAAVPVQVPVPKIKANIAENGKIVLQPRLCTLRSYGQDGF 65

Query: 65  VPIKA---KRVGD-DDADVSPFFATLSEYIKTSKDSHEFEIISGRLAMIVFAATVTMEVL 124
             +K    K  GD DD  VSPFF TLSEYI++SK S +FEIISGRLAMIVFAATVT EV+
Sbjct: 66  GVVKTSSRKDSGDHDDQVVSPFFETLSEYIESSKKSRDFEIISGRLAMIVFAATVTTEVV 125

Query: 125 TGNSVFRKMDLEGIEEAAGICLGAVIMAAIFAFSSNARNRVGRIFSIGCNTFIDSLIDQI 184
           TGN+VFRKMDL GIEEA G+CLGAV  AAIFA+ S+ARNRVGRIF+IGCNTFIDSLID+I
Sbjct: 126 TGNTVFRKMDLVGIEEAVGVCLGAVTCAAIFAWFSSARNRVGRIFTIGCNTFIDSLIDEI 185

Query: 185 VDGLFYEINPGDWSDDV 192
           VDGLFY+  P DWSD++
Sbjct: 186 VDGLFYDTEPSDWSDEI 202

The following BLAST results are available for this feature:

BLAST of CmaCh07G007560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STEP2_ARATH	6.8e-48	61.35	Stress enhanced protein 2, chloroplastic OS=Arabidopsis thaliana GN=SEP2 PE=2 SV...	[more]

BLAST of CmaCh07G007560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI08_CUCSA	6.0e-75	79.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487600 PE=4 SV=1	[more]
I1K4P7_SOYBN	7.8e-59	65.31	Uncharacterized protein OS=Glycine max GN=GLYMA_05G183500 PE=4 SV=1	[more]
B9H5A9_POPTR	3.0e-58	65.48	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s08610g PE=4 SV=1	[more]
A0A0B2RAE6_GLYSO	2.5e-57	63.45	Uncharacterized protein OS=Glycine soja GN=glysoja_008444 PE=4 SV=1	[more]
I1KT92_SOYBN	2.5e-57	63.45	Uncharacterized protein OS=Glycine max GN=GLYMA_08G141300 PE=4 SV=1	[more]

BLAST of CmaCh07G007560 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21970.1	3.8e-49	61.35	stress enhanced protein 2	[more]

BLAST of CmaCh07G007560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079234\|ref\|XP_008440147.1\|	3.7e-78	81.73	PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis melo]	[more]
gi\|449448410\|ref\|XP_004141959.1\|	8.5e-75	79.29	PREDICTED: stress enhanced protein 2, chloroplastic [Cucumis sativus]	[more]
gi\|743823341\|ref\|XP_011021934.1\|	6.6e-59	65.99	PREDICTED: stress enhanced protein 2, chloroplastic [Populus euphratica]	[more]
gi\|356512744\|ref\|XP_003525076.1\|	1.1e-58	65.31	PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max]	[more]
gi\|224081248\|ref\|XP_002306351.1\|	4.3e-58	65.48	hypothetical protein POPTR_0005s08610g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0034450	ubiquitin-ubiquitin ligase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G007560.1	CmaCh07G007560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 90..121 score: 2.7
None	No IPR available	PANTHER	PTHR36490	FAMILY NOT NAMED	coord: 1..191 score: 1.3
None	No IPR available	PANTHER	PTHR36490:SF1	SUBFAMILY NOT NAMED	coord: 1..191 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G007560	Cucsa.101670	Cucumber (Gy14) v1	cgycmaB0235
CmaCh07G007560	Cla008502	Watermelon (97103) v1	cmawmB824
CmaCh07G007560	Csa6G487600	Cucumber (Chinese Long) v2	cmacuB877
CmaCh07G007560	MELO3C007486	Melon (DHL92) v3.5.1	cmameB809
CmaCh07G007560	ClCG01G016160	Watermelon (Charleston Gray)	cmawcgB754
CmaCh07G007560	CSPI06G27310	Wild cucumber (PI 183967)	cmacpiB893
CmaCh07G007560	CmoCh03G010370	Cucurbita moschata (Rifu)	cmacmoB858
CmaCh07G007560	CmoCh07G007780	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G007560	Lsi01G010580	Bottle gourd (USVL1VR-Ls)	cmalsiB786
CmaCh07G007560	Cp4.1LG10g03050	Cucurbita pepo (Zucchini)	cmacpeB866
CmaCh07G007560	Cp4.1LG19g11680	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G007560	MELO3C007486.2	Melon (DHL92) v3.6.1	cmamedB907
CmaCh07G007560	CsaV3_6G042430	Cucumber (Chinese Long) v3	cmacucB1035
CmaCh07G007560	Cla97C01G015160	Watermelon (97103) v2	cmawmbB875
CmaCh07G007560	Bhi03G001535	Wax gourd	cmawgoB1060
CmaCh07G007560	Carg00895	Silver-seed gourd	carcmaB0571
CmaCh07G007560	Carg05265	Silver-seed gourd	carcmaB1130

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh07G007560	CmaCh03G010360	Cucurbita maxima (Rimu)	cmacmaB523

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G007560	Cucumber (Gy14) v2	cgybcmaB861
CmaCh07G007560	Cucumber (Gy14) v1	cgycmaB1022