Csa6G486950 (gene) Cucumber (Chinese Long) v2

NameCsa6G486950
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionIron--sulfur cluster insertion protein ErpA; contains IPR000361 (FeS cluster biogenesis), IPR016092 (FeS cluster insertion protein)
LocationChr6 : 22771225 .. 22774373 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGAGAAGATGAAGAAAAATATCTGAAACGCTCGATCTTAACGAAAACAATATATCTTGACCGCACGATCCCAATACCCAAACATTTTCGACTAGTCAAACACGGCGGTACGCATATTCACTGGTCGTCGTTCACCCTTCGCCGGAAATATCGCGGCAGCACAACCGGGTTTCTCCGATGGCTTTCTCTTCGATTTCCATGAAATGCCCTTGCCCTCCCGTCCTTCACTTGCCAGCTCTTCCTAAAAGTTATGCACCTCAAACTTCTATTTCCTTTCGTTTTCCTTCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGTACGCTCTAATTTTCAATTTTCCCATCTGTTTTCCGTTATTATACTTGGCTATATCACCTTAGTTCATCGTTGTACTACTTGGGACGAAATTAATCAGGGTTTTGTTTTTCCCTTTTGGATTGGATTGAAATTTGAGGTTGTGGAGAACGTCTGGATTAGAGTTATTTTTTAAAAAAATCAATCAAACGTAGGATTCTTTTGTTGGTTGATTGTAATCGAAATTGATAGCTGGTGGATGTCTTGTGTTGAAATTAAGTAACAGAATTTTGGGACTTTATTGTTGATTTTCATGGAAAATAAATTTCCCCTGTACTTGTACTGACGACTTGTTTATGAGTTATAGTTCAAGATCCAGTTGGTGATATACAAACCGTGAATTTTAGGTCTTTGTTTTGTTCTAATGCCTAAATGATTAGTAGGATGGATTGGCCTTCATGTGGAGGCAAAGGTGTTTACTTTTTCTTGTGTTTGATACCATTGATTGGTTGTTTGTTTTAGAGCCTGTTTGGGAGTGGTTTTGAAATGGTTAATGGCTTTCTTTCATGTTCAAAACCACTCCGGAATTTGTCTTTAATCATTAAAAAAAGATTTAATGTTCGATAATTTCACTTTTAAATGCAATTTCCATATCTCTAAATTTAATTTTGAAGGATTAAAAGCATATTTCAAGTCATTTTGGATATGAAAAGTGATTTTAACCCTTTCAAAATAAGTCCAAACATGCCCTTTTATATCTTCTGGTGCAAATTATTTGTTGTTTTCTCTATGTCACTTTCCCTTTGCCTGTTACTGCAGATCAAAAGATAAAACCTAATGAATCTTGTCCTATAGTTTTGGCATATGAAATACGATGAGTATATCATGCAGTTATGATCAAAGTTTGCCTCGTCATCTTATGTTTTTTGTAATTAAACAGCTGCGCCAGCATCTGAGGGTATAGCACCTGCTATCTCATTAACCGATACTGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCTTACACCATGGAGTTTGAGAGCAGGGCAAATGCTAGACCTGATGACTCGATTATAGAATATAATGGCTTTGTGATAGGTAAGAGTTATGGCTTTGCTATTTTTCACCTTGAATTTCTAGTGAGATTTTTACTAGTGATAGTGCAACTGTTTGAAGCAATCCTTTTTTTGAACCCATTGCTTTATATACATGTGTATGTGTGTGGGTGGGTGGGGGAGGGGGGTGTGAGGATAGTGGAAAGTCCAAGTCTTGTTTTGAACATGTGTTGAATTTTGATACTGTGGAATGGTAAGGGCAAGTTTTCAAATTTCCTTAGGATGAAAGAGGCTTACTCTTTTATAGTTCTATACATTCAGATAGTGATGGATATTTCATGAACCATATGCCATAAATTTGAAGGACTCTGCAAGAATAATTTTTCTCTATAGTTCATAATCTACCTCTTAGCTCTAAAAGAAAACGGTGGTATACATAAGTCTAGGTTTGCATTTTTTTTATGAATCAAACTGCAAAAGGAAAGAATTCCAACACAAAGAATACAAGGGCGTGAAAAAAATCCAGCCCACCAAAACACCCCAACCATCGTAAGGAGGACCAACTAAGTAAAATGTTACCAATAGAGTAATTACAAAAATGCTTTGATATTGAAGCCGACTATGCTCCTTCTCCCTACCTCTAAAGACTCGATCGTTCCTCTCACCCCAAATGTCTCAAACAATAGTACACACCCCAACCAACAATAAAAATCCCCCTTTATCATTGAAAGGCAGATGGAGGAGGAACTCCTTGATCGTTGCTCTGTCACTCCTAGAGCCAACAAAACAAACACCCAACTCCTGCAGGAAAGAACTCCAAACTGCCCTTGCATAATGAGAGTCCCAGAAAAGAAGTCTAGGTTTGCATATTGTTAGATTGATGCTTTCTTTCCCGTGGATCGGTAGAGGACAAGTTTTCAATTTTTATTAGGATGAAAGAAGCTTACATATCATGAGCTGCGTGCCATAAATTTGCTGGACTCTATAAGAAGTTTTACTCTATAGCTCATAATCTATCACTTCTCTTCGACACTCAATCACTTGAATTATTTGATATGAGCAATTTTTTATGCTAACTGATAAGTAGGTTGCTCGACAACTTTTGTCAAATATATTTTTCTTTAATGCATGCTATTCAACATAAAGTGGTATATTGTTTCAATTCCTTGATAATTGCCAAAGTGATAAAAAAGTTTGTAATTCAAAACTTCGAGTCCTTCCACCCTCTTACCAATGAAAAGAGTGTTCTTGATAATTGCTCTCTACTCTATTGATAAAGGAAAGTTAGCATCTTTTAGTGAACTATGAAAGGATTTTTTTATCTACTTCATTTTCCTCTATGCCCTTTTAAGTTGTACCCTCGAACACGAATTTAAGTTCACTTTTAGTTTGCACTTTTGATACAAATTTCCCTCTCTTCTTGTTTTGTAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGAGGATTTTCTTTCAAGAACCCAAATGCTACACAAACTTGTGGTTGTGGAAAATCATTTAATGCAGAAATGTAGGACCATATTTTGTTTATATGAATGATTGAATAGAAACTTGATAGTTTCAGGTTAAAGAAAACTTAGAATGTATAAAAACTCTTACATTGCTTGACAATTGATCCTAATAGTATACCTTCTATTACTAGTCGTTGGTGA

mRNA sequence

ATGGCTTTCTCTTCGATTTCCATGAAATGCCCTTGCCCTCCCGTCCTTCACTTGCCAGCTCTTCCTAAAAGTTATGCACCTCAAACTTCTATTTCCTTTCGTTTTCCTTCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGCTGCGCCAGCATCTGAGGGTATAGCACCTGCTATCTCATTAACCGATACTGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCTTACACCATGGAGTTTGAGAGCAGGGCAAATGCTAGACCTGATGACTCGATTATAGAATATAATGGCTTTGTGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGAGGATTTTCTTTCAAGAACCCAAATGCTACACAAACTTGTGGTTGTGGAAAATCATTTAATGCAGAAATGTAG

Coding sequence (CDS)

ATGGCTTTCTCTTCGATTTCCATGAAATGCCCTTGCCCTCCCGTCCTTCACTTGCCAGCTCTTCCTAAAAGTTATGCACCTCAAACTTCTATTTCCTTTCGTTTTCCTTCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGCTGCGCCAGCATCTGAGGGTATAGCACCTGCTATCTCATTAACCGATACTGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCTTACACCATGGAGTTTGAGAGCAGGGCAAATGCTAGACCTGATGACTCGATTATAGAATATAATGGCTTTGTGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGAGGATTTTCTTTCAAGAACCCAAATGCTACACAAACTTGTGGTTGTGGAAAATCATTTAATGCAGAAATGTAG

Protein sequence

MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASEGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM*
BLAST of Csa6G486950 vs. Swiss-Prot
Match: ISCAP_ARATH (Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA PE=2 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 7.6e-62
Identity = 116/148 (78.38%), Postives = 125/148 (84.46%), Query Frame = 1

Query: 32  SFRFPSTKF-----SRRKSLSIRSVSVPAAPASEGIAPAISLTDTALKHLNKMRSERNED 91
           S  FPS  +     +RR  LS+RS SVPAAPA EG+ PAISL++ ALKHL+KMRSER ED
Sbjct: 33  SISFPSLSYVNLNLNRRNRLSVRSASVPAAPAMEGLKPAISLSENALKHLSKMRSERGED 92

Query: 92  LCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSD 151
           LCLRIGV+QGGCSGMSYTM+FE+RANARPDDS IEY GF IVCDPKS+LFLFGMQLDYSD
Sbjct: 93  LCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYSD 152

Query: 152 ALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           ALIGGGFSF NPNATQTCGCGKSF AEM
Sbjct: 153 ALIGGGFSFSNPNATQTCGCGKSFAAEM 180

BLAST of Csa6G486950 vs. Swiss-Prot
Match: Y1417_SYNY3 (Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1417 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-36
Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 1

Query: 63  APAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEY 122
           A  I L+D ALKHL  ++ ++ +DLCLR+GVRQGGCSGMSY M+FE    A   D + +Y
Sbjct: 9   AKGIQLSDAALKHLLALKEQQGKDLCLRVGVRQGGCSGMSYMMDFEEPNRATEHDEVFDY 68

Query: 123 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF 171
            GF I+CD KSLL+L+G+ LDYS+ALIGGGF F NPNA QTCGCGKSF
Sbjct: 69  EGFQIICDRKSLLYLYGLMLDYSNALIGGGFQFTNPNANQTCGCGKSF 116

BLAST of Csa6G486950 vs. Swiss-Prot
Match: YCF83_PORPU (Uncharacterized protein ycf83 OS=Porphyra purpurea GN=ycf83 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32
Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 1

Query: 66  ISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNGF 125
           I+LT+ A + +  ++S  + ++CLRIGV+QGGCSGMSY+M FES ++ R  D ++  + F
Sbjct: 8   ITLTEPAARQIKILKSNFDNEVCLRIGVKQGGCSGMSYSMNFESVSSLRETDEVLMLDSF 67

Query: 126 VIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFN 172
           ++ CDPKSLL+L+G+ LDYS  LIGGGF F NPNA+QTCGCGKSF+
Sbjct: 68  LVACDPKSLLYLYGLSLDYSSELIGGGFQFSNPNASQTCGCGKSFS 113

BLAST of Csa6G486950 vs. Swiss-Prot
Match: YCF83_PYRYE (Uncharacterized protein ycf83 OS=Pyropia yezoensis GN=ycf83 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.9e-30
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 1

Query: 60  EGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSI 119
           EG    I++T  ALK +  ++++   D+ LRIGVRQGGCSGMSY+M FE     +  D  
Sbjct: 2   EGNMGFITITKPALKQIAILKNDHENDVHLRIGVRQGGCSGMSYSMNFEHVDKLKDTDER 61

Query: 120 IEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFN 172
           +  + F +VCDPKSLL+L+G+ LD+S  LIGGGF F NPNA+QTCGCGKSF+
Sbjct: 62  LRLDNFSVVCDPKSLLYLYGLSLDFSSELIGGGFQFSNPNASQTCGCGKSFS 113

BLAST of Csa6G486950 vs. Swiss-Prot
Match: YCF83_GALSU (Uncharacterized protein ycf83 OS=Galdieria sulphuraria GN=ycf83 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.2e-29
Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 1

Query: 66  ISLTDTALKHLNKMRSERNED-LCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNG 125
           I++T +AL HLN +    +ED L +RIG++QGGCSG+SY M +E ++N   +D + +Y+ 
Sbjct: 6   INITKSALDHLNSISKLNSEDKLYIRIGIKQGGCSGLSYFMTYEKKSNISDNDLVYDYDN 65

Query: 126 FVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFN 172
           F +VCD KS+L+L+G+ LDYS +LI GGF F NPNA QTCGCGKSF+
Sbjct: 66  FTLVCDNKSILYLYGISLDYSSSLIDGGFKFLNPNAKQTCGCGKSFS 112

BLAST of Csa6G486950 vs. TrEMBL
Match: A0A0A0KJ66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486950 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 8.1e-95
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60
           MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE
Sbjct: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60

Query: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120
           GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII
Sbjct: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120

Query: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM
Sbjct: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 174

BLAST of Csa6G486950 vs. TrEMBL
Match: M5WD48_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012351mg PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.1e-70
Identity = 136/175 (77.71%), Postives = 149/175 (85.14%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPA-LPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPAS 60
           MAFS+I+  CP   +L  P  LP +++P  SISFRF     SRRK LSIRS S  AAP +
Sbjct: 1   MAFSAITTHCPS--LLRPPTNLPVTFSPPNSISFRFSKNNLSRRKPLSIRSTSTSAAPKT 60

Query: 61  EGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSI 120
           EG+APAISLTD ALKH NKMRSER EDLCLRIGV+QGGCSGMSYTM+FESRANARPDDS+
Sbjct: 61  EGLAPAISLTDNALKHFNKMRSERGEDLCLRIGVKQGGCSGMSYTMDFESRANARPDDSV 120

Query: 121 IEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           IEYNGFV+VCDPKSLLFL+GMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 IEYNGFVMVCDPKSLLFLYGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173

BLAST of Csa6G486950 vs. TrEMBL
Match: A0A140B490_PRUPE (Fe-S cluster assembly protein OS=Prunus persica var. persica GN=ISA2 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.1e-70
Identity = 136/175 (77.71%), Postives = 149/175 (85.14%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPA-LPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPAS 60
           MAFS+I+  CP   +L  P  LP +++P  SISFRF     SRRK LSIRS S  AAP +
Sbjct: 1   MAFSAITTHCPS--LLRPPTNLPVTFSPPNSISFRFSKNNLSRRKPLSIRSTSTSAAPKT 60

Query: 61  EGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSI 120
           EG+APAISLTD ALKH NKMRSER EDLCLRIGV+QGGCSGMSYTM+FESRANARPDDS+
Sbjct: 61  EGLAPAISLTDNALKHFNKMRSERGEDLCLRIGVKQGGCSGMSYTMDFESRANARPDDSV 120

Query: 121 IEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           IEYNGFV+VCDPKSLLFL+GMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 IEYNGFVMVCDPKSLLFLYGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173

BLAST of Csa6G486950 vs. TrEMBL
Match: A0A067KGP6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09426 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-68
Identity = 135/176 (76.70%), Postives = 147/176 (83.52%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPALPK--SYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPA 60
           MAFS        P +L LP   K  S +   S+SFRF  +  SR+ SLS+RS S P APA
Sbjct: 1   MAFSGTVTTPHRPSILRLPCHSKTTSVSSHDSVSFRFSRSNLSRKISLSVRSTSSPVAPA 60

Query: 61  SEGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDS 120
           +EGIAPAISLT+ ALKHLNKMR++RNEDLCLRIGV+QGGCSGMSYTMEFE+RANARPDDS
Sbjct: 61  TEGIAPAISLTENALKHLNKMRNDRNEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDS 120

Query: 121 IIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           IIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 IIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 176

BLAST of Csa6G486950 vs. TrEMBL
Match: A0A061DJ29_THECC (Chloroplast-localized ISCA-like protein OS=Theobroma cacao GN=TCM_001267 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-66
Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60
           MA SSI+  CP        +     +PQ S+SFRF  +  S  K LS+R+ +VPAAP SE
Sbjct: 1   MAISSITTNCPSLLRFSNNSKQSFSSPQISVSFRFSRSSLSCGKPLSVRATTVPAAPTSE 60

Query: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120
           G+APAI+LTD ALKHLNKMR+ER+EDLCLRIGV+QGGCSGMSYTM+FE RA+ARPDDSII
Sbjct: 61  GLAPAITLTDDALKHLNKMRAERDEDLCLRIGVKQGGCSGMSYTMDFEKRASARPDDSII 120

Query: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           EYNGF I+CDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 EYNGFTIICDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 174

BLAST of Csa6G486950 vs. TAIR10
Match: AT1G10500.1 (AT1G10500.1 chloroplast-localized ISCA-like protein)

HSP 1 Score: 238.0 bits (606), Expect = 4.3e-63
Identity = 116/148 (78.38%), Postives = 125/148 (84.46%), Query Frame = 1

Query: 32  SFRFPSTKF-----SRRKSLSIRSVSVPAAPASEGIAPAISLTDTALKHLNKMRSERNED 91
           S  FPS  +     +RR  LS+RS SVPAAPA EG+ PAISL++ ALKHL+KMRSER ED
Sbjct: 33  SISFPSLSYVNLNLNRRNRLSVRSASVPAAPAMEGLKPAISLSENALKHLSKMRSERGED 92

Query: 92  LCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSD 151
           LCLRIGV+QGGCSGMSYTM+FE+RANARPDDS IEY GF IVCDPKS+LFLFGMQLDYSD
Sbjct: 93  LCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYSD 152

Query: 152 ALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           ALIGGGFSF NPNATQTCGCGKSF AEM
Sbjct: 153 ALIGGGFSFSNPNATQTCGCGKSFAAEM 180

BLAST of Csa6G486950 vs. TAIR10
Match: AT5G03905.1 (AT5G03905.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 45/136 (33.09%), Postives = 65/136 (47.79%), Query Frame = 1

Query: 40  FSRRKSLSIRSVSVPAAPASEGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCS 99
           FS   ++   S S  + P S      + L+D  ++ + +++S   E   LR+GV  GGCS
Sbjct: 26  FSSASAIKEASSSSSSQPESSS-NDVVHLSDNCIRRMKELQSSEPEKKMLRLGVETGGCS 85

Query: 100 GMSYTMEFESRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFK-NP 159
           G  Y  E ++R N  PDD + E NG  +V D  S   + G  +DY + LI   F    NP
Sbjct: 86  GFQYKFELDNRTN--PDDRVFEKNGVKLVVDNVSYDLVKGATIDYEEELIRAAFVVAVNP 145

Query: 160 NATQTCGCGKSFNAEM 175
           +A   C C  SF  ++
Sbjct: 146 SAVGGCSCKSSFMVKL 158

BLAST of Csa6G486950 vs. NCBI nr
Match: gi|449448422|ref|XP_004141965.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 1.2e-94
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60
           MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE
Sbjct: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60

Query: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120
           GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII
Sbjct: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120

Query: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM
Sbjct: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 174

BLAST of Csa6G486950 vs. NCBI nr
Match: gi|659079202|ref|XP_008440129.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo])

HSP 1 Score: 314.7 bits (805), Expect = 1.0e-82
Identity = 160/174 (91.95%), Postives = 164/174 (94.25%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60
           MAFSSI+MK P  PVLHL ALPKS APQ+SISFRF  TKFSR KSLSIRSVSVPAAPASE
Sbjct: 1   MAFSSITMKFP--PVLHLRALPKSSAPQSSISFRFSPTKFSRSKSLSIRSVSVPAAPASE 60

Query: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120
            IAPAISLTD ALKHLNKMRSER+EDLCLRIGVRQGGCSGMSYTMEFE+RANARPDDSII
Sbjct: 61  SIAPAISLTDNALKHLNKMRSERDEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSII 120

Query: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM
Sbjct: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 172

BLAST of Csa6G486950 vs. NCBI nr
Match: gi|595830129|ref|XP_007206009.1| (hypothetical protein PRUPE_ppa012351mg [Prunus persica])

HSP 1 Score: 272.7 bits (696), Expect = 4.4e-70
Identity = 136/175 (77.71%), Postives = 149/175 (85.14%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPA-LPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPAS 60
           MAFS+I+  CP   +L  P  LP +++P  SISFRF     SRRK LSIRS S  AAP +
Sbjct: 1   MAFSAITTHCPS--LLRPPTNLPVTFSPPNSISFRFSKNNLSRRKPLSIRSTSTSAAPKT 60

Query: 61  EGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSI 120
           EG+APAISLTD ALKH NKMRSER EDLCLRIGV+QGGCSGMSYTM+FESRANARPDDS+
Sbjct: 61  EGLAPAISLTDNALKHFNKMRSERGEDLCLRIGVKQGGCSGMSYTMDFESRANARPDDSV 120

Query: 121 IEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           IEYNGFV+VCDPKSLLFL+GMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 IEYNGFVMVCDPKSLLFLYGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173

BLAST of Csa6G486950 vs. NCBI nr
Match: gi|645218786|ref|XP_008232424.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Prunus mume])

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 137/177 (77.40%), Postives = 149/177 (84.18%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPA-LPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVP--AAP 60
           MAFS+I+  CP   +L LP  LP + +P  SISFRF     SRRK LSIRS S    AAP
Sbjct: 1   MAFSAITTHCPS--LLRLPTNLPVTSSPLNSISFRFSKNNLSRRKPLSIRSTSTSTSAAP 60

Query: 61  ASEGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDD 120
            +EG+APAISLTD ALKH NKMRSER EDLCLRIGV+QGGCSGMSYTM+FESRANARPDD
Sbjct: 61  KTEGLAPAISLTDNALKHFNKMRSERGEDLCLRIGVKQGGCSGMSYTMDFESRANARPDD 120

Query: 121 SIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           S+IEYNGFV+VCDPKSLLFL+GMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 SVIEYNGFVMVCDPKSLLFLYGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 175

BLAST of Csa6G486950 vs. NCBI nr
Match: gi|1009146759|ref|XP_015891043.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 136/177 (76.84%), Postives = 150/177 (84.75%), Query Frame = 1

Query: 1   MAFSSISMKCPCPPVLHLPA-LPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPA- 60
           MAFS+I+M CP   VL LP   P +  PQ S S RF   K +RRK +SIRS SVPAAPA 
Sbjct: 1   MAFSAITMHCPS--VLRLPNNQPSNSLPQNSFSLRFSPLKLNRRKPISIRSTSVPAAPAP 60

Query: 61  -SEGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDD 120
            SEG+APAI L+D+ALKHLN MRSERNEDLCLRIGV+QGGCSGMSYTMEFE+RAN RPDD
Sbjct: 61  TSEGLAPAILLSDSALKHLNTMRSERNEDLCLRIGVKQGGCSGMSYTMEFENRANTRPDD 120

Query: 121 SIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 175
           S+IEY GF+IVCDPKSLLF++GMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 SVIEYKGFIIVCDPKSLLFVYGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ISCAP_ARATH7.6e-6278.38Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA... [more]
Y1417_SYNY35.5e-3662.96Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ... [more]
YCF83_PORPU3.7e-3256.60Uncharacterized protein ycf83 OS=Porphyra purpurea GN=ycf83 PE=3 SV=1[more]
YCF83_PYRYE5.9e-3054.46Uncharacterized protein ycf83 OS=Pyropia yezoensis GN=ycf83 PE=3 SV=1[more]
YCF83_GALSU2.2e-2954.21Uncharacterized protein ycf83 OS=Galdieria sulphuraria GN=ycf83 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KJ66_CUCSA8.1e-95100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486950 PE=4 SV=1[more]
M5WD48_PRUPE3.1e-7077.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012351mg PE=4 SV=1[more]
A0A140B490_PRUPE3.1e-7077.71Fe-S cluster assembly protein OS=Prunus persica var. persica GN=ISA2 PE=2 SV=1[more]
A0A067KGP6_JATCU1.3e-6876.70Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09426 PE=4 SV=1[more]
A0A061DJ29_THECC1.2e-6673.56Chloroplast-localized ISCA-like protein OS=Theobroma cacao GN=TCM_001267 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT1G10500.14.3e-6378.38 chloroplast-localized ISCA-like protein[more]
AT5G03905.11.3e-1433.09 Iron-sulphur cluster biosynthesis family protein[more]
Match NameE-valueIdentityDescription
gi|449448422|ref|XP_004141965.1|1.2e-94100.00PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis sativus][more]
gi|659079202|ref|XP_008440129.1|1.0e-8291.95PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo][more]
gi|595830129|ref|XP_007206009.1|4.4e-7077.71hypothetical protein PRUPE_ppa012351mg [Prunus persica][more]
gi|645218786|ref|XP_008232424.1|1.1e-6877.40PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Prunus mume][more]
gi|1009146759|ref|XP_015891043.1|1.1e-6876.84PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000361FeS_biogenesis
IPR016092FeS_cluster_insertion
IPR017870FeS_cluster_insertion_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0097428 protein maturation by iron-sulfur cluster transfer
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005198 structural molecule activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU086210cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G486950.1Csa6G486950.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU086210CU086210transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000361FeS cluster biogenesisGENE3DG3DSA:2.60.300.12coord: 66..161
score: 1.1
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 66..168
score: 1.1
IPR000361FeS cluster biogenesisunknownSSF89360HesB-like domaincoord: 65..161
score: 1.96
IPR016092FeS cluster insertion proteinTIGRFAMsTIGR00049TIGR00049coord: 66..171
score: 4.9
IPR017870FeS cluster insertion, C-terminal, conserved sitePROSITEPS01152HESBcoord: 153..170
scor
NoneNo IPR availablePANTHERPTHR10072IRON-SULFUR CLUSTER ASSEMBLY PROTEINcoord: 39..173
score: 8.6

The following gene(s) are paralogous to this gene:

None