Csa6G486950 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAGAGAAGATGAAGAAAAATATCTGAAACGCTCGATCTTAACGAAAACAATATATCTTGACCGCACGATCCCAATACCCAAACATTTTCGACTAGTCAAACACGGCGGTACGCATATTCACTGGTCGTCGTTCACCCTTCGCCGGAAATATCGCGGCAGCACAACCGGGTTTCTCCGATGGCTTTCTCTTCGATTTCCATGAAATGCCCTTGCCCTCCCGTCCTTCACTTGCCAGCTCTTCCTAAAAGTTATGCACCTCAAACTTCTATTTCCTTTCGTTTTCCTTCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGTACGCTCTAATTTTCAATTTTCCCATCTGTTTTCCGTTATTATACTTGGCTATATCACCTTAGTTCATCGTTGTACTACTTGGGACGAAATTAATCAGGGTTTTGTTTTTCCCTTTTGGATTGGATTGAAATTTGAGGTTGTGGAGAACGTCTGGATTAGAGTTATTTTTTAAAAAAATCAATCAAACGTAGGATTCTTTTGTTGGTTGATTGTAATCGAAATTGATAGCTGGTGGATGTCTTGTGTTGAAATTAAGTAACAGAATTTTGGGACTTTATTGTTGATTTTCATGGAAAATAAATTTCCCCTGTACTTGTACTGACGACTTGTTTATGAGTTATAGTTCAAGATCCAGTTGGTGATATACAAACCGTGAATTTTAGGTCTTTGTTTTGTTCTAATGCCTAAATGATTAGTAGGATGGATTGGCCTTCATGTGGAGGCAAAGGTGTTTACTTTTTCTTGTGTTTGATACCATTGATTGGTTGTTTGTTTTAGAGCCTGTTTGGGAGTGGTTTTGAAATGGTTAATGGCTTTCTTTCATGTTCAAAACCACTCCGGAATTTGTCTTTAATCATTAAAAAAAGATTTAATGTTCGATAATTTCACTTTTAAATGCAATTTCCATATCTCTAAATTTAATTTTGAAGGATTAAAAGCATATTTCAAGTCATTTTGGATATGAAAAGTGATTTTAACCCTTTCAAAATAAGTCCAAACATGCCCTTTTATATCTTCTGGTGCAAATTATTTGTTGTTTTCTCTATGTCACTTTCCCTTTGCCTGTTACTGCAGATCAAAAGATAAAACCTAATGAATCTTGTCCTATAGTTTTGGCATATGAAATACGATGAGTATATCATGCAGTTATGATCAAAGTTTGCCTCGTCATCTTATGTTTTTTGTAATTAAACAGCTGCGCCAGCATCTGAGGGTATAGCACCTGCTATCTCATTAACCGATACTGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCTTACACCATGGAGTTTGAGAGCAGGGCAAATGCTAGACCTGATGACTCGATTATAGAATATAATGGCTTTGTGATAGGTAAGAGTTATGGCTTTGCTATTTTTCACCTTGAATTTCTAGTGAGATTTTTACTAGTGATAGTGCAACTGTTTGAAGCAATCCTTTTTTTGAACCCATTGCTTTATATACATGTGTATGTGTGTGGGTGGGTGGGGGAGGGGGGTGTGAGGATAGTGGAAAGTCCAAGTCTTGTTTTGAACATGTGTTGAATTTTGATACTGTGGAATGGTAAGGGCAAGTTTTCAAATTTCCTTAGGATGAAAGAGGCTTACTCTTTTATAGTTCTATACATTCAGATAGTGATGGATATTTCATGAACCATATGCCATAAATTTGAAGGACTCTGCAAGAATAATTTTTCTCTATAGTTCATAATCTACCTCTTAGCTCTAAAAGAAAACGGTGGTATACATAAGTCTAGGTTTGCATTTTTTTTATGAATCAAACTGCAAAAGGAAAGAATTCCAACACAAAGAATACAAGGGCGTGAAAAAAATCCAGCCCACCAAAACACCCCAACCATCGTAAGGAGGACCAACTAAGTAAAATGTTACCAATAGAGTAATTACAAAAATGCTTTGATATTGAAGCCGACTATGCTCCTTCTCCCTACCTCTAAAGACTCGATCGTTCCTCTCACCCCAAATGTCTCAAACAATAGTACACACCCCAACCAACAATAAAAATCCCCCTTTATCATTGAAAGGCAGATGGAGGAGGAACTCCTTGATCGTTGCTCTGTCACTCCTAGAGCCAACAAAACAAACACCCAACTCCTGCAGGAAAGAACTCCAAACTGCCCTTGCATAATGAGAGTCCCAGAAAAGAAGTCTAGGTTTGCATATTGTTAGATTGATGCTTTCTTTCCCGTGGATCGGTAGAGGACAAGTTTTCAATTTTTATTAGGATGAAAGAAGCTTACATATCATGAGCTGCGTGCCATAAATTTGCTGGACTCTATAAGAAGTTTTACTCTATAGCTCATAATCTATCACTTCTCTTCGACACTCAATCACTTGAATTATTTGATATGAGCAATTTTTTATGCTAACTGATAAGTAGGTTGCTCGACAACTTTTGTCAAATATATTTTTCTTTAATGCATGCTATTCAACATAAAGTGGTATATTGTTTCAATTCCTTGATAATTGCCAAAGTGATAAAAAAGTTTGTAATTCAAAACTTCGAGTCCTTCCACCCTCTTACCAATGAAAAGAGTGTTCTTGATAATTGCTCTCTACTCTATTGATAAAGGAAAGTTAGCATCTTTTAGTGAACTATGAAAGGATTTTTTTATCTACTTCATTTTCCTCTATGCCCTTTTAAGTTGTACCCTCGAACACGAATTTAAGTTCACTTTTAGTTTGCACTTTTGATACAAATTTCCCTCTCTTCTTGTTTTGTAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGAGGATTTTCTTTCAAGAACCCAAATGCTACACAAACTTGTGGTTGTGGAAAATCATTTAATGCAGAAATGTAGGACCATATTTTGTTTATATGAATGATTGAATAGAAACTTGATAGTTTCAGGTTAAAGAAAACTTAGAATGTATAAAAACTCTTACATTGCTTGACAATTGATCCTAATAGTATACCTTCTATTACTAGTCGTTGGTGA ATGGCTTTCTCTTCGATTTCCATGAAATGCCCTTGCCCTCCCGTCCTTCACTTGCCAGCTCTTCCTAAAAGTTATGCACCTCAAACTTCTATTTCCTTTCGTTTTCCTTCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGCTGCGCCAGCATCTGAGGGTATAGCACCTGCTATCTCATTAACCGATACTGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCTTACACCATGGAGTTTGAGAGCAGGGCAAATGCTAGACCTGATGACTCGATTATAGAATATAATGGCTTTGTGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGAGGATTTTCTTTCAAGAACCCAAATGCTACACAAACTTGTGGTTGTGGAAAATCATTTAATGCAGAAATGTAG ATGGCTTTCTCTTCGATTTCCATGAAATGCCCTTGCCCTCCCGTCCTTCACTTGCCAGCTCTTCCTAAAAGTTATGCACCTCAAACTTCTATTTCCTTTCGTTTTCCTTCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGCTGCGCCAGCATCTGAGGGTATAGCACCTGCTATCTCATTAACCGATACTGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCTTACACCATGGAGTTTGAGAGCAGGGCAAATGCTAGACCTGATGACTCGATTATAGAATATAATGGCTTTGTGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGAGGATTTTCTTTCAAGAACCCAAATGCTACACAAACTTGTGGTTGTGGAAAATCATTTAATGCAGAAATGTAG MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASEGIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM*
BLAST of Csa6G486950 vs. Swiss-Prot
Match: ISCAP_ARATH (Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA PE=2 SV=2) HSP 1 Score: 238.0 bits (606), Expect = 7.6e-62 Identity = 116/148 (78.38%), Postives = 125/148 (84.46%), Query Frame = 1
BLAST of Csa6G486950 vs. Swiss-Prot
Match: Y1417_SYNY3 (Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1417 PE=3 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 5.5e-36 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 1
BLAST of Csa6G486950 vs. Swiss-Prot
Match: YCF83_PORPU (Uncharacterized protein ycf83 OS=Porphyra purpurea GN=ycf83 PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32 Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 1
BLAST of Csa6G486950 vs. Swiss-Prot
Match: YCF83_PYRYE (Uncharacterized protein ycf83 OS=Pyropia yezoensis GN=ycf83 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.9e-30 Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of Csa6G486950 vs. Swiss-Prot
Match: YCF83_GALSU (Uncharacterized protein ycf83 OS=Galdieria sulphuraria GN=ycf83 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.2e-29 Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 1
BLAST of Csa6G486950 vs. TrEMBL
Match: A0A0A0KJ66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486950 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 8.1e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa6G486950 vs. TrEMBL
Match: M5WD48_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012351mg PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.1e-70 Identity = 136/175 (77.71%), Postives = 149/175 (85.14%), Query Frame = 1
BLAST of Csa6G486950 vs. TrEMBL
Match: A0A140B490_PRUPE (Fe-S cluster assembly protein OS=Prunus persica var. persica GN=ISA2 PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.1e-70 Identity = 136/175 (77.71%), Postives = 149/175 (85.14%), Query Frame = 1
BLAST of Csa6G486950 vs. TrEMBL
Match: A0A067KGP6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09426 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.3e-68 Identity = 135/176 (76.70%), Postives = 147/176 (83.52%), Query Frame = 1
BLAST of Csa6G486950 vs. TrEMBL
Match: A0A061DJ29_THECC (Chloroplast-localized ISCA-like protein OS=Theobroma cacao GN=TCM_001267 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.2e-66 Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = 1
BLAST of Csa6G486950 vs. TAIR10
Match: AT1G10500.1 (AT1G10500.1 chloroplast-localized ISCA-like protein) HSP 1 Score: 238.0 bits (606), Expect = 4.3e-63 Identity = 116/148 (78.38%), Postives = 125/148 (84.46%), Query Frame = 1
BLAST of Csa6G486950 vs. TAIR10
Match: AT5G03905.1 (AT5G03905.1 Iron-sulphur cluster biosynthesis family protein) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14 Identity = 45/136 (33.09%), Postives = 65/136 (47.79%), Query Frame = 1
BLAST of Csa6G486950 vs. NCBI nr
Match: gi|449448422|ref|XP_004141965.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis sativus]) HSP 1 Score: 354.4 bits (908), Expect = 1.2e-94 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa6G486950 vs. NCBI nr
Match: gi|659079202|ref|XP_008440129.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo]) HSP 1 Score: 314.7 bits (805), Expect = 1.0e-82 Identity = 160/174 (91.95%), Postives = 164/174 (94.25%), Query Frame = 1
BLAST of Csa6G486950 vs. NCBI nr
Match: gi|595830129|ref|XP_007206009.1| (hypothetical protein PRUPE_ppa012351mg [Prunus persica]) HSP 1 Score: 272.7 bits (696), Expect = 4.4e-70 Identity = 136/175 (77.71%), Postives = 149/175 (85.14%), Query Frame = 1
BLAST of Csa6G486950 vs. NCBI nr
Match: gi|645218786|ref|XP_008232424.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Prunus mume]) HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68 Identity = 137/177 (77.40%), Postives = 149/177 (84.18%), Query Frame = 1
BLAST of Csa6G486950 vs. NCBI nr
Match: gi|1009146759|ref|XP_015891043.1| (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68 Identity = 136/177 (76.84%), Postives = 150/177 (84.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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