Csa6G476020 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATATTACTATAAATTTGAAACAATTTTTTTTATTGGAAAGAAGCACACAAATTAAAGCATTCCCTTATTAAGTAGTAATAATTTTGAAAGGGTAATTTAGAAAGATACATAGATATGTGTACTCCTCTGGGTCCTTATGGTCCATGTGACGATTCGGATGCCCCATACGTAAAAGAAATTGCAGAACGGGCAGTGGCTGATCACAACAAATCAGCAGGAACAAATTACACACTCGTTTCCATCGTCAACTGTGAGTCCGTGGTTGTATCCGGAACCAACTACCGCCTTGTGCTGTCGCTTAAGGATGACAGTACTACCAGTGATTTCTTGGTAGTTGTGTATTATAGGCCATGGGATAATTACCTGGAGGTCACTCAGTTTGAACCTGTCACGAAATAAATTGCAACATCCCATCTACTACTGCTTATATATATACGTATGTATGAGCTATCTATATAAGTAATGGAACATACATTTTAAATAAAGCTATTATGTGTGTGTTTTTGTATCTTTTCATCTCACTGTTGTGGGGCGCATGTTTAGAAGTTCTTTTTTTTCTTTCAAAGGGGTGCAAACAGGAGAATTTCTCATCTAAGGAAGCTTAGACTATGCGAGTTTTGATGGAATTTAGTGTGAATTAGTGCAGGTATAATCGTGCCACAAAATATATAGTTTGGTCTTTTTATATGAGAAATGAAATATGTAAATCTCACTGTACTTGTGGCTGCAGGTTGAATGTATCAATTGATCAATAACATAATCATATGAAAATTAAGGGTTAAGGATACAAATATGTATCTAAAGGGAAAAAATGAAATAAAATCATATACTTTTTAAGTATGTATTGAGAGCAAAAC ATGTGTACTCCTCTGGGTCCTTATGGTCCATGTGACGATTCGGATGCCCCATACGTAAAAGAAATTGCAGAACGGGCAGTGGCTGATCACAACAAATCAGCAGGAACAAATTACACACTCGTTTCCATCGTCAACTGTGAGTCCGTGGTTGTATCCGGAACCAACTACCGCCTTGTGCTGTCGCTTAAGGATGACAGTACTACCAGTGATTTCTTGGTAGTTGTGTATTATAGGCCATGGGATAATTACCTGGAGGTCACTCAGTTTGAACCTGTCACGAAATAA ATGTGTACTCCTCTGGGTCCTTATGGTCCATGTGACGATTCGGATGCCCCATACGTAAAAGAAATTGCAGAACGGGCAGTGGCTGATCACAACAAATCAGCAGGAACAAATTACACACTCGTTTCCATCGTCAACTGTGAGTCCGTGGTTGTATCCGGAACCAACTACCGCCTTGTGCTGTCGCTTAAGGATGACAGTACTACCAGTGATTTCTTGGTAGTTGTGTATTATAGGCCATGGGATAATTACCTGGAGGTCACTCAGTTTGAACCTGTCACGAAATAA MCTPLGPYGPCDDSDAPYVKEIAERAVADHNKSAGTNYTLVSIVNCESVVVSGTNYRLVLSLKDDSTTSDFLVVVYYRPWDNYLEVTQFEPVTK*
BLAST of Csa6G476020 vs. Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 3.7e-10 Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 1
BLAST of Csa6G476020 vs. Swiss-Prot
Match: CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.3e-10 Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 1
BLAST of Csa6G476020 vs. Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.9e-07 Identity = 29/88 (32.95%), Postives = 45/88 (51.14%), Query Frame = 1
BLAST of Csa6G476020 vs. TrEMBL
Match: A0A0A0KKN2_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus GN=Csa_6G476020 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 6.9e-48 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of Csa6G476020 vs. TrEMBL
Match: O80389_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.5e-14 Identity = 41/87 (47.13%), Postives = 62/87 (71.26%), Query Frame = 1
BLAST of Csa6G476020 vs. TrEMBL
Match: I3SL29_LOTJA (Cysteine proteinase inhibitor OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.2e-13 Identity = 37/88 (42.05%), Postives = 58/88 (65.91%), Query Frame = 1
BLAST of Csa6G476020 vs. TrEMBL
Match: B9HCU3_POPTR (Cysteine proteinase inhibitor OS=Populus trichocarpa GN=POPTR_0006s01560g PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.2e-13 Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 1
BLAST of Csa6G476020 vs. TrEMBL
Match: M0SNR0_MUSAM (Cysteine proteinase inhibitor OS=Musa acuminata subsp. malaccensis PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.4e-13 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 1
BLAST of Csa6G476020 vs. TAIR10
Match: AT5G47550.1 (AT5G47550.1 Cystatin/monellin superfamily protein) HSP 1 Score: 65.5 bits (158), Expect = 2.1e-11 Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 1
BLAST of Csa6G476020 vs. NCBI nr
Match: gi|700193107|gb|KGN48311.1| (hypothetical protein Csa_6G476020 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 9.9e-48 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of Csa6G476020 vs. NCBI nr
Match: gi|525507274|ref|NP_001267677.1| (cysteine proteinase inhibitor 5-like [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 9.3e-14 Identity = 41/87 (47.13%), Postives = 62/87 (71.26%), Query Frame = 1
BLAST of Csa6G476020 vs. NCBI nr
Match: gi|388505810|gb|AFK40971.1| (unknown [Lotus japonicus]) HSP 1 Score: 82.4 bits (202), Expect = 4.6e-13 Identity = 37/88 (42.05%), Postives = 58/88 (65.91%), Query Frame = 1
BLAST of Csa6G476020 vs. NCBI nr
Match: gi|743929484|ref|XP_011008977.1| (PREDICTED: cysteine proteinase inhibitor 5-like [Populus euphratica]) HSP 1 Score: 82.0 bits (201), Expect = 6.0e-13 Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 1
BLAST of Csa6G476020 vs. NCBI nr
Match: gi|224086460|ref|XP_002307893.1| (cystatin family protein [Populus trichocarpa]) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-12 Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |