Csa6G452650 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCTTCTTCCTCCCTTCTTCACTTTCACCCAAAACATATCAATTCATCCATTCCTTCCCAATTTCCCCTTTTCTTCTCTCCATCAAAATGGGCAACTGTAATTGTTTGTTCATCGATAACAAACCCATCAGAATCATGAAAACCGACGGCAAAATCCTTGAATACAAATCCCCCACTAGAGTTTTCCAAGTCCTCTCCGATTTCTCCGGCCACGAAATCTCCGACGCCGTTCCCGTCTCTCATCATCTCCACCGAACCGCCAAGCTTCTCTCCGGCCACCTCTACTTTCTCATACCCAAGGAACCAGAAGAGAAAAAGCCCAAGAAGGCGGTCCGGTTCGCTGAACCGGAGAAGGAGACGGCCACCGGTGGAGGGGTGGTGAGAATAAAAGTGGTTATGACGAAAAAGGAGCTGCAGGAAATGGTTGAAAGAGGAGGAATTTCGGCAGAGGAAATGATTTGTAAGATTAAAAATGGATGTGGGGAAATTAGTAGCAGATCAGAAATGGAAGAAGAAGAAGATGATGATGATGATGATGAAGAATCGGAGTTACAAAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCTAGTTAGTTTTACCCAACTCCGTCCGGTTTTCTTTCTTTCTTCTTTTTTTCTCTTTATATACAGATCAAAGTGTATAACAAACTTGAAAGATAGATAATGAAAACGAGAAAGTTTTTGTCATATAATTTCACCTTTTTCCTTTCTTCCCT ATGGGCAACTGTAATTGTTTGTTCATCGATAACAAACCCATCAGAATCATGAAAACCGACGGCAAAATCCTTGAATACAAATCCCCCACTAGAGTTTTCCAAGTCCTCTCCGATTTCTCCGGCCACGAAATCTCCGACGCCGTTCCCGTCTCTCATCATCTCCACCGAACCGCCAAGCTTCTCTCCGGCCACCTCTACTTTCTCATACCCAAGGAACCAGAAGAGAAAAAGCCCAAGAAGGCGGTCCGGTTCGCTGAACCGGAGAAGGAGACGGCCACCGGTGGAGGGGTGGTGAGAATAAAAGTGGTTATGACGAAAAAGGAGCTGCAGGAAATGGTTGAAAGAGGAGGAATTTCGGCAGAGGAAATGATTTGTAAGATTAAAAATGGATGTGGGGAAATTAGTAGCAGATCAGAAATGGAAGAAGAAGAAGATGATGATGATGATGATGAAGAATCGGAGTTACAAAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCTAG ATGGGCAACTGTAATTGTTTGTTCATCGATAACAAACCCATCAGAATCATGAAAACCGACGGCAAAATCCTTGAATACAAATCCCCCACTAGAGTTTTCCAAGTCCTCTCCGATTTCTCCGGCCACGAAATCTCCGACGCCGTTCCCGTCTCTCATCATCTCCACCGAACCGCCAAGCTTCTCTCCGGCCACCTCTACTTTCTCATACCCAAGGAACCAGAAGAGAAAAAGCCCAAGAAGGCGGTCCGGTTCGCTGAACCGGAGAAGGAGACGGCCACCGGTGGAGGGGTGGTGAGAATAAAAGTGGTTATGACGAAAAAGGAGCTGCAGGAAATGGTTGAAAGAGGAGGAATTTCGGCAGAGGAAATGATTTGTAAGATTAAAAATGGATGTGGGGAAATTAGTAGCAGATCAGAAATGGAAGAAGAAGAAGATGATGATGATGATGATGAAGAATCGGAGTTACAAAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCTAG MGNCNCLFIDNKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVSHHLHRTAKLLSGHLYFLIPKEPEEKKPKKAVRFAEPEKETATGGGVVRIKVVMTKKELQEMVERGGISAEEMICKIKNGCGEISSRSEMEEEEDDDDDDEESELQRWKPVLESIPESEVAC*
BLAST of Csa6G452650 vs. TrEMBL
Match: A0A0A0KHH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452650 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.2e-93 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Csa6G452650 vs. TrEMBL
Match: A0A0D2NS61_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G239800 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.6e-31 Identity = 79/166 (47.59%), Postives = 112/166 (67.47%), Query Frame = 1
BLAST of Csa6G452650 vs. TrEMBL
Match: F6HKL5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03260 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.8e-31 Identity = 76/164 (46.34%), Postives = 110/164 (67.07%), Query Frame = 1
BLAST of Csa6G452650 vs. TrEMBL
Match: M5VS91_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012685mg PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.4e-30 Identity = 76/164 (46.34%), Postives = 106/164 (64.63%), Query Frame = 1
BLAST of Csa6G452650 vs. TrEMBL
Match: A0A061ET98_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_022601 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30 Identity = 77/165 (46.67%), Postives = 105/165 (63.64%), Query Frame = 1
BLAST of Csa6G452650 vs. TAIR10
Match: AT3G10120.1 (AT3G10120.1 unknown protein) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-24 Identity = 66/186 (35.48%), Postives = 102/186 (54.84%), Query Frame = 1
BLAST of Csa6G452650 vs. TAIR10
Match: AT5G03890.1 (AT5G03890.1 unknown protein) HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22 Identity = 68/187 (36.36%), Postives = 96/187 (51.34%), Query Frame = 1
BLAST of Csa6G452650 vs. TAIR10
Match: AT3G21680.1 (AT3G21680.1 unknown protein) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08 Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 1
BLAST of Csa6G452650 vs. NCBI nr
Match: gi|778717509|ref|XP_004143322.2| (PREDICTED: uncharacterized protein LOC101213283 [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 1.7e-93 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Csa6G452650 vs. NCBI nr
Match: gi|659125222|ref|XP_008462573.1| (PREDICTED: uncharacterized protein LOC103500900 [Cucumis melo]) HSP 1 Score: 322.0 bits (824), Expect = 6.3e-85 Identity = 162/175 (92.57%), Postives = 169/175 (96.57%), Query Frame = 1
BLAST of Csa6G452650 vs. NCBI nr
Match: gi|823138654|ref|XP_012469167.1| (PREDICTED: uncharacterized protein LOC105787357 [Gossypium raimondii]) HSP 1 Score: 144.1 bits (362), Expect = 2.4e-31 Identity = 79/166 (47.59%), Postives = 112/166 (67.47%), Query Frame = 1
BLAST of Csa6G452650 vs. NCBI nr
Match: gi|225440876|ref|XP_002282533.1| (PREDICTED: uncharacterized protein LOC100254636 [Vitis vinifera]) HSP 1 Score: 143.3 bits (360), Expect = 4.0e-31 Identity = 76/164 (46.34%), Postives = 110/164 (67.07%), Query Frame = 1
BLAST of Csa6G452650 vs. NCBI nr
Match: gi|1009160959|ref|XP_015898635.1| (PREDICTED: uncharacterized protein LOC107432088 [Ziziphus jujuba]) HSP 1 Score: 143.3 bits (360), Expect = 4.0e-31 Identity = 79/175 (45.14%), Postives = 109/175 (62.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |