Csa6G452640 (gene) Cucumber (Chinese Long) v2

NameCsa6G452640
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionSoft fertilization envelope protein
LocationChr6 : 21577750 .. 21578783 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAATCGTATGTTTTCAAATAAAAGAGAGAGAGATAAAGAGATGATTTTGCCACACAAGTGGAATCCAAGCTGAGAAAAGACACGTTCATTTGTCACTTACCATACAAATCAAGATCATATGTTTTCTCTATGACGTGCATACTAACTTTTCCACCCATTCTCTTTGCCCTCTTTTACGCTTAATTCTTCATTCTTGTTCTTTCTTCTCTCTTCTCTCTTCACCATCATCAACAACACACAACGGAAGAACCCTAGTTTCTTCATTATTCATATCAAACTTTCAGTCTTTACCAAACCCCATCACAGATATAATATATCCCCCACCCCATGACTCTCCCTTCTCCCAACCCCAACTCCTCATTATTCCTTCCCCATCATCCTCATCTCCAAGAATCAGATCAAACTCTTTCTGAACATGATCCACAGAAGCCTCTTGAGGAGGAGGATGAGAGTAGTCGGGAGCGGTTGAAGCGCCACCGTATGGCCGTGGCGGGGCACGTTTGGATTCCGGACAAGTGGGGAAAAGAGGAGTTTTTGAAGGATTGGATCGACGGCTCCGCATTCGAAGCCTCTTTGTTTCATTCTGGGATTGTGTCGGCTCGCTGTGCTTTGGCTCGTGATGCTAAGAGATTGTCCCCGAATAATAACACTGCCACCGCCGCTGCCACTGCCACTGCGGCTGCAGGAGCTTTGAGAATACTAAACAGTAGTACTTGTTAAACGTATTATGAATATTATTAAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTTATTAATTGGGTTATGTATATTGAAATAATATCGTTCTATCTCTCTCACTCACTCCATCGAATAATCCACTTGTGAGAGCTGATACGATCTCTCTCTTGAAGAGATCTATATGATCATATTATTGAAAAGTTTGAATGATTATTATTATTAAATTAAATATCTATCTATTTGTTGGAATGATTATTGTTATTATTATTATCATTACTATTATTTTATCAAAGGTTGTTTAATTGTTGATTATTATTAT

mRNA sequence

ATGACTCTCCCTTCTCCCAACCCCAACTCCTCATTATTCCTTCCCCATCATCCTCATCTCCAAGAATCAGATCAAACTCTTTCTGAACATGATCCACAGAAGCCTCTTGAGGAGGAGGATGAGAGTAGTCGGGAGCGGTTGAAGCGCCACCGTATGGCCGTGGCGGGGCACGTTTGGATTCCGGACAAGTGGGGAAAAGAGGAGTTTTTGAAGGATTGGATCGACGGCTCCGCATTCGAAGCCTCTTTGTTTCATTCTGGGATTGTGTCGGCTCGCTGTGCTTTGGCTCGTGATGCTAAGAGATTGTCCCCGAATAATAACACTGCCACCGCCGCTGCCACTGCCACTGCGGCTGCAGGAGCTTTGAGAATACTAAACAGTAGTACTTGTTAA

Coding sequence (CDS)

ATGACTCTCCCTTCTCCCAACCCCAACTCCTCATTATTCCTTCCCCATCATCCTCATCTCCAAGAATCAGATCAAACTCTTTCTGAACATGATCCACAGAAGCCTCTTGAGGAGGAGGATGAGAGTAGTCGGGAGCGGTTGAAGCGCCACCGTATGGCCGTGGCGGGGCACGTTTGGATTCCGGACAAGTGGGGAAAAGAGGAGTTTTTGAAGGATTGGATCGACGGCTCCGCATTCGAAGCCTCTTTGTTTCATTCTGGGATTGTGTCGGCTCGCTGTGCTTTGGCTCGTGATGCTAAGAGATTGTCCCCGAATAATAACACTGCCACCGCCGCTGCCACTGCCACTGCGGCTGCAGGAGCTTTGAGAATACTAAACAGTAGTACTTGTTAA

Protein sequence

MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAGALRILNSSTC*
BLAST of Csa6G452640 vs. TrEMBL
Match: A0A0A0KFC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452640 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.4e-69
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1

Query: 1   MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWI 60
           MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWI
Sbjct: 1   MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWI 60

Query: 61  PDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAG 120
           PDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAG
Sbjct: 61  PDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAG 120

Query: 121 ALRILNSSTC 131
           ALRILNSSTC
Sbjct: 121 ALRILNSSTC 130

BLAST of Csa6G452640 vs. TrEMBL
Match: M5VRF4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012609mg PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.7e-17
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1

Query: 24  DQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFEASL 83
           D  + +H+P    +E+  S RERLK+HR+ VAG VWIPD WG+EE LKDW+D SAF+ASL
Sbjct: 74  DVVVVDHEPSNVADED--SGRERLKKHRVEVAGQVWIPDIWGQEELLKDWMDCSAFDASL 133

Query: 84  FHSGIVSARCALARDAKR 102
           F SGI+SAR AL  + +R
Sbjct: 134 FPSGIMSARSALIEEGRR 149

BLAST of Csa6G452640 vs. TrEMBL
Match: A0A022R654_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024452mg PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-16
Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 1

Query: 14  LPHHPHLQESDQT--LSEHDPQKPLEEEDE---------------SSRERLKRHRMAVAG 73
           +P     ++SD T  L E   +K +EEEDE               + RERLKRHR+ VAG
Sbjct: 17  IPIQTETEQSDPTTNLPESPSKKRVEEEDEKRASVGITTTAVEDAAGRERLKRHRVEVAG 76

Query: 74  HVWIPDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKR 102
            VWIPD WG+E FLKDWID +AF+ASL +S I SAR +L  +A+R
Sbjct: 77  RVWIPDMWGQENFLKDWIDCTAFDASLVNSSITSARDSLVEEARR 121

BLAST of Csa6G452640 vs. TrEMBL
Match: A0A0A0LAW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G776900 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-16
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 1

Query: 26  TLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFH 85
           T+SE   ++  EEE+E  RERLKRHR  +AG VWIPD WG+EE LKDWID SAF+A LF 
Sbjct: 72  TVSEKKEEE--EEEEEGGRERLKRHRREMAGRVWIPDIWGQEELLKDWIDCSAFDACLFP 131

Query: 86  SGIVSARCALARDAKR 102
           +GI SAR AL  + +R
Sbjct: 132 TGIGSARAALVEERRR 145

BLAST of Csa6G452640 vs. TrEMBL
Match: V4UUU4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012842mg PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.6e-16
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 1

Query: 32  PQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFHSGIVSA 91
           P +  + E+++ RERLKRHR+ VAG VWIPD WG+EE LKDWID SAF+A L  SGI+SA
Sbjct: 109 PVQEEKSEEDNGRERLKRHRIDVAGRVWIPDIWGQEEMLKDWIDCSAFDALLVPSGIMSA 168

Query: 92  RCALARDAKR 102
           R ALA++ +R
Sbjct: 169 RAALAQEGRR 178

BLAST of Csa6G452640 vs. TAIR10
Match: AT3G52740.1 (AT3G52740.1 unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 4.5e-17
Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1

Query: 22  ESDQTLSEHDPQKPLEEED-ESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFE 81
           + D  L E  P++  EE+  ++ RERLK+HR  +AG VWIP+ WG+EE LKDWID S F+
Sbjct: 44  KKDLALLEEKPKQSQEEDRVDTGRERLKKHRREIAGRVWIPEIWGQEELLKDWIDCSTFD 103

Query: 82  ASLFHSGIVSARCALARDAKR 102
             L  +GI SAR AL  +A+R
Sbjct: 104 TCLVPAGISSARTALVEEARR 124

BLAST of Csa6G452640 vs. TAIR10
Match: AT3G44450.1 (AT3G44450.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 9.8e-12
Identity = 34/58 (58.62%), Postives = 37/58 (63.79%), Query Frame = 1

Query: 42  SSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDA 100
           S R+RLKRHR  VAG V IPD WGKE  L  W+D S F+A+   S IVSAR AL  D+
Sbjct: 39  SGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMADS 96

BLAST of Csa6G452640 vs. NCBI nr
Match: gi|778717506|ref|XP_011657706.1| (PREDICTED: uncharacterized protein LOC105435886 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-69
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1

Query: 1   MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWI 60
           MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWI
Sbjct: 1   MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWI 60

Query: 61  PDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAG 120
           PDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAG
Sbjct: 61  PDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAG 120

Query: 121 ALRILNSSTC 131
           ALRILNSSTC
Sbjct: 121 ALRILNSSTC 130

BLAST of Csa6G452640 vs. NCBI nr
Match: gi|694381155|ref|XP_009366670.1| (PREDICTED: uncharacterized protein LOC103956416 [Pyrus x bretschneideri])

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-18
Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1

Query: 7   NPNSSLFLPHHPHLQESDQ--TLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKW 66
           N   S+   H     E D    + + DP     EE+ES RERLK+HRM VAG VWIPD W
Sbjct: 56  NEEVSVMDGHDSAAAEGDDHVVVLDQDPTAAAAEEEESGRERLKKHRMEVAGQVWIPDIW 115

Query: 67  GKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKR 102
           G+EE L+DWID SAF+ASLF SGI++AR AL  + +R
Sbjct: 116 GQEELLQDWIDCSAFDASLFPSGIMTARSALVEEGRR 152

BLAST of Csa6G452640 vs. NCBI nr
Match: gi|657942684|ref|XP_008389780.1| (PREDICTED: uncharacterized protein LOC103452045 [Malus domestica])

HSP 1 Score: 95.5 bits (236), Expect = 7.3e-17
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 1

Query: 20  LQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAF 79
           ++  D  + +  P     EE+ES RERL++HRM VAG VWIP+ WG+EE L+DWID SAF
Sbjct: 67  VEGDDDVVVDQVPTAAAAEEEESGRERLQKHRMEVAGQVWIPEIWGQEELLQDWIDCSAF 126

Query: 80  EASLFHSGIVSARCALARDAKR 102
           +ASLF SGI++AR AL  + +R
Sbjct: 127 DASLFPSGIMTARSALVEEGRR 148

BLAST of Csa6G452640 vs. NCBI nr
Match: gi|595807915|ref|XP_007202690.1| (hypothetical protein PRUPE_ppa012609mg [Prunus persica])

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-16
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1

Query: 24  DQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFEASL 83
           D  + +H+P    +E+  S RERLK+HR+ VAG VWIPD WG+EE LKDW+D SAF+ASL
Sbjct: 74  DVVVVDHEPSNVADED--SGRERLKKHRVEVAGQVWIPDIWGQEELLKDWMDCSAFDASL 133

Query: 84  FHSGIVSARCALARDAKR 102
           F SGI+SAR AL  + +R
Sbjct: 134 FPSGIMSARSALIEEGRR 149

BLAST of Csa6G452640 vs. NCBI nr
Match: gi|694417861|ref|XP_009336972.1| (PREDICTED: uncharacterized protein LOC103929487 [Pyrus x bretschneideri])

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 1

Query: 20  LQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAF 79
           ++  D  + +  P     EE+ES  ERLK+HRM VAG VWIP+ WG+EE L+DWID SAF
Sbjct: 44  VEGDDDVVVDQVPTAAAAEEEESGLERLKKHRMEVAGQVWIPEIWGQEELLQDWIDCSAF 103

Query: 80  EASLFHSGIVSARCALARDAKR 102
           +ASLF SGI++AR AL  + +R
Sbjct: 104 DASLFPSGIMTARSALVEEGRR 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KFC4_CUCSA3.4e-69100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452640 PE=4 SV=1[more]
M5VRF4_PRUPE8.7e-1757.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012609mg PE=4 SV=1[more]
A0A022R654_ERYGU2.5e-1648.57Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024452mg PE=4 SV=1[more]
A0A0A0LAW6_CUCSA3.3e-1660.53Uncharacterized protein OS=Cucumis sativus GN=Csa_3G776900 PE=4 SV=1[more]
V4UUU4_9ROSI5.6e-1661.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012842mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G52740.14.5e-1750.62 unknown protein[more]
AT3G44450.19.8e-1258.62 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778717506|ref|XP_011657706.1|4.8e-69100.00PREDICTED: uncharacterized protein LOC105435886 [Cucumis sativus][more]
gi|694381155|ref|XP_009366670.1|3.0e-1852.58PREDICTED: uncharacterized protein LOC103956416 [Pyrus x bretschneideri][more]
gi|657942684|ref|XP_008389780.1|7.3e-1753.66PREDICTED: uncharacterized protein LOC103452045 [Malus domestica][more]
gi|595807915|ref|XP_007202690.1|1.2e-1657.69hypothetical protein PRUPE_ppa012609mg [Prunus persica][more]
gi|694417861|ref|XP_009336972.1|1.6e-1653.66PREDICTED: uncharacterized protein LOC103929487 [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU084791cucumber EST collection version 3.0transcribed_cluster
CU138995cucumber EST collection version 3.0transcribed_cluster
CU151286cucumber EST collection version 3.0transcribed_cluster
CU165175cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G452640.1Csa6G452640.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU138995CU138995transcribed_cluster
CU151286CU151286transcribed_cluster
CU084791CU084791transcribed_cluster
CU165175CU165175transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34207FAMILY NOT NAMEDcoord: 19..128
score: 9.9
NoneNo IPR availablePANTHERPTHR34207:SF3SUBFAMILY NOT NAMEDcoord: 19..128
score: 9.9

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G452640Cla017694Watermelon (97103) v1cuwmB452
Csa6G452640MELO3C024545Melon (DHL92) v3.5.1cumeB508
Csa6G452640MELO3C009470Melon (DHL92) v3.5.1cumeB484
Csa6G452640ClCG04G010040Watermelon (Charleston Gray)cuwcgB464
Csa6G452640ClCG10G019000Watermelon (Charleston Gray)cuwcgB424
Csa6G452640Lsi01G012220Bottle gourd (USVL1VR-Ls)culsiB435
Csa6G452640Lsi03G018960Bottle gourd (USVL1VR-Ls)culsiB445
Csa6G452640MELO3C021428.2Melon (DHL92) v3.6.1cumedB411
Csa6G452640MELO3C024545.2Melon (DHL92) v3.6.1cumedB487
Csa6G452640MELO3C009470.2Melon (DHL92) v3.6.1cumedB464
Csa6G452640Cla97C10G202020Watermelon (97103) v2cuwmbB418
Csa6G452640Cla97C04G076880Watermelon (97103) v2cuwmbB455
Csa6G452640Bhi11G001913Wax gourdcuwgoB527
Csa6G452640Bhi03G001421Wax gourdcuwgoB631
Csa6G452640CSPI06G25490Wild cucumber (PI 183967)cpicuB313
Csa6G452640CSPI03G34890Wild cucumber (PI 183967)cpicuB149
Csa6G452640Cucsa.083380Cucumber (Gy14) v1cgycuB082
Csa6G452640Cucsa.241120Cucumber (Gy14) v1cgycuB346
Csa6G452640CmaCh06G004700Cucurbita maxima (Rimu)cmacuB840
Csa6G452640CmoCh14G003000Cucurbita moschata (Rifu)cmocuB253
Csa6G452640CmoCh06G004720Cucurbita moschata (Rifu)cmocuB828
Csa6G452640CmoCh07G008840Cucurbita moschata (Rifu)cmocuB865
Csa6G452640Cp4.1LG08g10230Cucurbita pepo (Zucchini)cpecuB876
Csa6G452640Cp4.1LG03g00920Cucurbita pepo (Zucchini)cpecuB624
Csa6G452640Cp4.1LG19g05050Cucurbita pepo (Zucchini)cpecuB503
Csa6G452640Carg05364Silver-seed gourdcarcuB0826
Csa6G452640Carg03674Silver-seed gourdcarcuB0278
Csa6G452640Carg10479Silver-seed gourdcarcuB0267
Csa6G452640Carg14533Silver-seed gourdcarcuB0167
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa6G452640Csa3G776900Cucumber (Chinese Long) v2cucuB110