Csa6G452640 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAATCGTATGTTTTCAAATAAAAGAGAGAGAGATAAAGAGATGATTTTGCCACACAAGTGGAATCCAAGCTGAGAAAAGACACGTTCATTTGTCACTTACCATACAAATCAAGATCATATGTTTTCTCTATGACGTGCATACTAACTTTTCCACCCATTCTCTTTGCCCTCTTTTACGCTTAATTCTTCATTCTTGTTCTTTCTTCTCTCTTCTCTCTTCACCATCATCAACAACACACAACGGAAGAACCCTAGTTTCTTCATTATTCATATCAAACTTTCAGTCTTTACCAAACCCCATCACAGATATAATATATCCCCCACCCCATGACTCTCCCTTCTCCCAACCCCAACTCCTCATTATTCCTTCCCCATCATCCTCATCTCCAAGAATCAGATCAAACTCTTTCTGAACATGATCCACAGAAGCCTCTTGAGGAGGAGGATGAGAGTAGTCGGGAGCGGTTGAAGCGCCACCGTATGGCCGTGGCGGGGCACGTTTGGATTCCGGACAAGTGGGGAAAAGAGGAGTTTTTGAAGGATTGGATCGACGGCTCCGCATTCGAAGCCTCTTTGTTTCATTCTGGGATTGTGTCGGCTCGCTGTGCTTTGGCTCGTGATGCTAAGAGATTGTCCCCGAATAATAACACTGCCACCGCCGCTGCCACTGCCACTGCGGCTGCAGGAGCTTTGAGAATACTAAACAGTAGTACTTGTTAAACGTATTATGAATATTATTAAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTTATTAATTGGGTTATGTATATTGAAATAATATCGTTCTATCTCTCTCACTCACTCCATCGAATAATCCACTTGTGAGAGCTGATACGATCTCTCTCTTGAAGAGATCTATATGATCATATTATTGAAAAGTTTGAATGATTATTATTATTAAATTAAATATCTATCTATTTGTTGGAATGATTATTGTTATTATTATTATCATTACTATTATTTTATCAAAGGTTGTTTAATTGTTGATTATTATTAT ATGACTCTCCCTTCTCCCAACCCCAACTCCTCATTATTCCTTCCCCATCATCCTCATCTCCAAGAATCAGATCAAACTCTTTCTGAACATGATCCACAGAAGCCTCTTGAGGAGGAGGATGAGAGTAGTCGGGAGCGGTTGAAGCGCCACCGTATGGCCGTGGCGGGGCACGTTTGGATTCCGGACAAGTGGGGAAAAGAGGAGTTTTTGAAGGATTGGATCGACGGCTCCGCATTCGAAGCCTCTTTGTTTCATTCTGGGATTGTGTCGGCTCGCTGTGCTTTGGCTCGTGATGCTAAGAGATTGTCCCCGAATAATAACACTGCCACCGCCGCTGCCACTGCCACTGCGGCTGCAGGAGCTTTGAGAATACTAAACAGTAGTACTTGTTAA ATGACTCTCCCTTCTCCCAACCCCAACTCCTCATTATTCCTTCCCCATCATCCTCATCTCCAAGAATCAGATCAAACTCTTTCTGAACATGATCCACAGAAGCCTCTTGAGGAGGAGGATGAGAGTAGTCGGGAGCGGTTGAAGCGCCACCGTATGGCCGTGGCGGGGCACGTTTGGATTCCGGACAAGTGGGGAAAAGAGGAGTTTTTGAAGGATTGGATCGACGGCTCCGCATTCGAAGCCTCTTTGTTTCATTCTGGGATTGTGTCGGCTCGCTGTGCTTTGGCTCGTGATGCTAAGAGATTGTCCCCGAATAATAACACTGCCACCGCCGCTGCCACTGCCACTGCGGCTGCAGGAGCTTTGAGAATACTAAACAGTAGTACTTGTTAA MTLPSPNPNSSLFLPHHPHLQESDQTLSEHDPQKPLEEEDESSRERLKRHRMAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFHSGIVSARCALARDAKRLSPNNNTATAAATATAAAGALRILNSSTC*
BLAST of Csa6G452640 vs. TrEMBL
Match: A0A0A0KFC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452640 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 3.4e-69 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
BLAST of Csa6G452640 vs. TrEMBL
Match: M5VRF4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012609mg PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 8.7e-17 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1
BLAST of Csa6G452640 vs. TrEMBL
Match: A0A022R654_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024452mg PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.5e-16 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 1
BLAST of Csa6G452640 vs. TrEMBL
Match: A0A0A0LAW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G776900 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.3e-16 Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 1
BLAST of Csa6G452640 vs. TrEMBL
Match: V4UUU4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012842mg PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.6e-16 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 1
BLAST of Csa6G452640 vs. TAIR10
Match: AT3G52740.1 (AT3G52740.1 unknown protein) HSP 1 Score: 84.7 bits (208), Expect = 4.5e-17 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1
BLAST of Csa6G452640 vs. TAIR10
Match: AT3G44450.1 (AT3G44450.1 unknown protein) HSP 1 Score: 67.0 bits (162), Expect = 9.8e-12 Identity = 34/58 (58.62%), Postives = 37/58 (63.79%), Query Frame = 1
BLAST of Csa6G452640 vs. NCBI nr
Match: gi|778717506|ref|XP_011657706.1| (PREDICTED: uncharacterized protein LOC105435886 [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 4.8e-69 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
BLAST of Csa6G452640 vs. NCBI nr
Match: gi|694381155|ref|XP_009366670.1| (PREDICTED: uncharacterized protein LOC103956416 [Pyrus x bretschneideri]) HSP 1 Score: 100.1 bits (248), Expect = 3.0e-18 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1
BLAST of Csa6G452640 vs. NCBI nr
Match: gi|657942684|ref|XP_008389780.1| (PREDICTED: uncharacterized protein LOC103452045 [Malus domestica]) HSP 1 Score: 95.5 bits (236), Expect = 7.3e-17 Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 1
BLAST of Csa6G452640 vs. NCBI nr
Match: gi|595807915|ref|XP_007202690.1| (hypothetical protein PRUPE_ppa012609mg [Prunus persica]) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-16 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1
BLAST of Csa6G452640 vs. NCBI nr
Match: gi|694417861|ref|XP_009336972.1| (PREDICTED: uncharacterized protein LOC103929487 [Pyrus x bretschneideri]) HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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