Carg10479 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCTCCCTATCAAACCCAACTCCCCATTATCGCCTCATCTCCAACACTCAGATCAAACCACTCACCATCACGACCTTCACACCTCCTCCACCGTCCCGTCCGATGACACCCCCCGAGAGAGGTTAAAGCGCCACCGTGTCGCTGTGGCCGGGCACGTTTGGATCCCTGACAAGTGGGGAAAAGAAGAGTTCTTGAAGGATTGGATCGACGGCTCTGCATTTGAAGCCTCTTTGTTCCCCTCCGGGATCATGTTGGCTCGCCAGGCTTTGGCTCGAGAAGCTAAGAGATCGTCGCCGAATAACAACACCGCCACCGCCGCCACCACCACCACCACCGCCCCTGCTGCTGCTTCCGGAGATTTGAGATTATTAAACGGTTGTTAA ATGACTCTCCCTATCAAACCCAACTCCCCATTATCGCCTCATCTCCAACACTCAGATCAAACCACTCACCATCACGACCTTCACACCTCCTCCACCGTCCCGTCCGATGACACCCCCCGAGAGAGGTTAAAGCGCCACCGTGTCGCTGTGGCCGGGCACGTTTGGATCCCTGACAAGTGGGGAAAAGAAGAGTTCTTGAAGGATTGGATCGACGGCTCTGCATTTGAAGCCTCTTTGTTCCCCTCCGGGATCATGTTGGCTCGCCAGGCTTTGGCTCGAGAAGCTAAGAGATCGTCGCCGAATAACAACACCGCCACCGCCGCCACCACCACCACCACCGCCCCTGCTGCTGCTTCCGGAGATTTGAGATTATTAAACGGTTGTTAA ATGACTCTCCCTATCAAACCCAACTCCCCATTATCGCCTCATCTCCAACACTCAGATCAAACCACTCACCATCACGACCTTCACACCTCCTCCACCGTCCCGTCCGATGACACCCCCCGAGAGAGGTTAAAGCGCCACCGTGTCGCTGTGGCCGGGCACGTTTGGATCCCTGACAAGTGGGGAAAAGAAGAGTTCTTGAAGGATTGGATCGACGGCTCTGCATTTGAAGCCTCTTTGTTCCCCTCCGGGATCATGTTGGCTCGCCAGGCTTTGGCTCGAGAAGCTAAGAGATCGTCGCCGAATAACAACACCGCCACCGCCGCCACCACCACCACCACCGCCCCTGCTGCTGCTTCCGGAGATTTGAGATTATTAAACGGTTGTTAA MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSPNNNTATAATTTTTAPAAASGDLRLLNGC
BLAST of Carg10479 vs. NCBI nr
Match: XP_011657706.1 (PREDICTED: uncharacterized protein LOC105435886 [Cucumis sativus] >KGN48263.1 hypothetical protein Csa_6G452640 [Cucumis sativus]) HSP 1 Score: 127.5 bits (319), Expect = 3.3e-26 Identity = 70/101 (69.31%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Carg10479 vs. NCBI nr
Match: XP_023518112.1 (protein BIC1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124.0 bits (310), Expect = 3.6e-25 Identity = 63/96 (65.62%), Postives = 73/96 (76.04%), Query Frame = 0
BLAST of Carg10479 vs. NCBI nr
Match: XP_022972606.1 (protein BIC1-like [Cucurbita maxima]) HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25 Identity = 63/96 (65.62%), Postives = 73/96 (76.04%), Query Frame = 0
BLAST of Carg10479 vs. NCBI nr
Match: XP_022962648.1 (protein BIC1-like [Cucurbita moschata]) HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24 Identity = 74/125 (59.20%), Postives = 83/125 (66.40%), Query Frame = 0
BLAST of Carg10479 vs. NCBI nr
Match: ONH96167.1 (hypothetical protein PRUPE_7G110700 [Prunus persica]) HSP 1 Score: 99.8 bits (247), Expect = 7.3e-18 Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Carg10479 vs. TAIR10
Match: AT3G52740.1 (unknown protein) HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16 Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Carg10479 vs. TAIR10
Match: AT3G44450.1 (unknown protein) HSP 1 Score: 64.3 bits (155), Expect = 6.2e-11 Identity = 41/94 (43.62%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of Carg10479 vs. Swiss-Prot
Match: sp|Q9LXJ1|BIC1_ARATH (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.0e-15 Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Carg10479 vs. Swiss-Prot
Match: sp|Q9M280|BIC2_ARATH (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09 Identity = 41/94 (43.62%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of Carg10479 vs. TrEMBL
Match: tr|A0A0A0KFC4|A0A0A0KFC4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452640 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26 Identity = 70/101 (69.31%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Carg10479 vs. TrEMBL
Match: tr|M5VRF4|M5VRF4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G110700 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18 Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Carg10479 vs. TrEMBL
Match: tr|A0A251NA11|A0A251NA11_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G110700 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18 Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Carg10479 vs. TrEMBL
Match: tr|A0A251NA19|A0A251NA19_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G110700 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18 Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Carg10479 vs. TrEMBL
Match: tr|A0A2I4HGB8|A0A2I4HGB8_9ROSI (uncharacterized protein LOC109017364 OS=Juglans regia OX=51240 GN=LOC109017364 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.1e-17 Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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