Csa6G434300 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G434300
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 20505790 .. 20508356 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGGCTTGTCGAGGGCTCATTGATCAATTTATACCCTATTAAAGTTGAACACGAGCGTTTCGATAGGGTAAGACTATTGAATGAAAATGGAATAATATTTTCAAGTATTTTCTTAGAGACTATTGTCCTTTACCAACATTTGTGGTTCCCACAATGGTTTGGCTCATAACATTTCCTTCAAAAGCCTAAAACTAGAGAATTATTCATGAATTTAATTTATTTTACTTTTGTCTCCATATACAATTCTCTAAAAACACAAAAGAGACAACATTTAAATTAATCATTTTAATGGTTCAAATTAGTACATAAAATTACAACATCCATAGGTAGGGATGAAAATTCACACATCATCATAGATTTTGAATGCAAAAAATAGTTTCTTTTTTGTTTGTAGATGAAAAATATAAATTGATATTAGATAAATGATCAAAAATAGAAAAGCCGACAAAATATTTACACTTCCTAGATAGAATATCAGGACAAATAATTTTTTTTTTTTTTATATATATATTTATAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATTTAGTTAATTTTGTCTTATATTCTATGATGTATAAATAATCAGTTAGTTTTTGTATTTTTGAAAAAAAACCCTGAAAACAACTTCGTAAAATAAATTAAAATATTTATAAGATATAATAAAATCTTTTGATTTTATCAACACAACCATGATTATCAAATGTTTGTTATTTATAGAATATAAAATTTTGTTAAATATTTTCTCAAATTTGTTATTTTTGATAATTTTTATTTAAAAGATATTTTTTGCCCTAGGGATTAATTTGGAAATAATGTGTGATTGAAGAAAATAACCACAAGGCAATGGAAATCGAAAAGAAATAAAAAAGAAGAAGAAAGAAAAAGAAAAGCCCTCAAAGCCATTCCCAATCAATTATCTCCGAATTCCTAATTCTTCCTTTTTTCATAAACACTTATCTCTCTCGGAAACAATCCTTCGTTAAATCAAACCACAAAAGAGGAAAAAAAAAAGAGAAAAGAGAAAAAAGAAAAACGAAAAAACGAAAAAACAAAAAACGAGAGGAAGGTTAAACGAAATACAAATTTCACTCTTTTTTTCATCTCCTTCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTTCTTCCTCCTAAATCTGTTGTTCACGTTGCCACCTGGCGCATCTCAGCCGCCGCCGCCGCCACCACCGCCGTTGTCCATCATCTTTTTGAATTCCTTTCGGTTTTTCTCTCCCTTACCGGATAACCCAACCCGATTCAATTCCTCACTGTTCGCCTTGTCGCCGATTTACTTCCGGCGACTCACAATTGGCGCCTTTCATAGGAATAGGATAAACTTTTACCCTTTGCGTTCTTTCCATCTTGATCAGTCAAACTTCATTTTCTTTACCTTCTGCTTGCCTTCTCAAGGTGAGAGACTTAACTTTTCTTTTCGATCATCTTTTTCCTTCTGCTTTCCGATCGTAATTTCTTAGCGTTTTTTGAAGTTTCTGATTATGGATTGGGAGTTCGTTTGAATGCTAGGTTTTTTTCTGGGGGTTTCGGGGGGTTTTAGTCTTTAAAATATTTGATTTTCGGACTTAGTTTGTTGATCTGGAAATTGCTGTGTGCACTATGTTTTAGCATTAGTTTTCCGCGTTATCTGAATTTGTCTTGGCTTCGGATAGTCATGTGTTTAGAATTCCGTGAAGGGATTTTATTTCTGATTGATGAACGAATTGCTTAGTGTCGAGTTTCGTTTGTACACTCACTTGGGCTTTGTCACGTGCCACCTTCAGCTTGGATTTTGCTTTGAATACTAACCTCTGCACTTCAATTATTTACATTGGCTTAATTCTTCCCTTGTTTGAAATAATTGCTGTAAGTTCACATGAACTGTTTTCTGCTCGGAAAGGCTTAGTAAACAAAGGAAACTGGAAGGTGGTTTGTTGAATGTATGATGTAAGTTAATTCACCCAATGGGTTTTGAGTGTTAAGTCGGAAACTACAATGAAGTGTGCAGGATGGTGCGGACCAAGCTTGTTTGATATTAGTTACTTTCTTAAACCTTTTTTCTTTTGAGGTTCACGTTCCCGCCTTCTGTATTACTGCATTTCTCCTTCACTTCACCATTCACAATTCTGTCTTTCTGGTACAGCATATTTATATGATTTTGAATACCTGACCTTTACTAAGGAAAAGTTCAATTTTTCTAGTTCATTACTTTCCATTTTGATCGAGATAGTATTAAGTGTAGTGTTCCACTTTCAGGATACAAAGCTTCTTTTTCACCAGCACTAAGTTGAGATGTTTTATTCCATGTAGAAGAATGGCCTTTTTTAGGAATCATTCAAACGAACCAGGTTCTCATGGTGTATTGGAAGATAAAGGCCATGGACAAGTTACCGATAGAACTCACACCTCTGCAGGAAATGACGAAGAGGACATGGGTACAGATAAAGAATTTAATATGA

mRNA sequence

ATGGCAGGGCTTGTCGAGGGCTCATTGATCAATTTATACCCTATTAAAGTTGAACACGAGCGTTTCGATAGGCCGCCGCCGCCGCCACCACCGCCGTTGTCCATCATCTTTTTGAATTCCTTTCGGTTTTTCTCTCCCTTACCGGATAACCCAACCCGATTCAATTCCTCACTGTTCGCCTTGTCGCCGATTTACTTCCGGCGACTCACAATTGGCGCCTTTCATAGGAATAGGATAAACTTTTACCCTTTGCGTTCTTTCCATCTTGATCAGTCAAACTTCATTTTCTTTACCTTCTGCTTGCCTTCTCAAGAAGAATGGCCTTTTTTAGGAATCATTCAAACGAACCAGGTTCTCATGGTGTATTGGAAGATAAAGGCCATGGACAAGTTACCGATAGAACTCACACCTCTGCAGGAAATGACGAAGAGGACATGGGTACAGATAAAGAATTTAATATGA

Coding sequence (CDS)

ATGGCAGGGCTTGTCGAGGGCTCATTGATCAATTTATACCCTATTAAAGTTGAACACGAGCGTTTCGATAGGCCGCCGCCGCCGCCACCACCGCCGTTGTCCATCATCTTTTTGAATTCCTTTCGGTTTTTCTCTCCCTTACCGGATAACCCAACCCGATTCAATTCCTCACTGTTCGCCTTGTCGCCGATTTACTTCCGGCGACTCACAATTGGCGCCTTTCATAGGAATAGGATAAACTTTTACCCTTTGCGTTCTTTCCATCTTGATCAGTCAAACTTCATTTTCTTTACCTTCTGCTTGCCTTCTCAAGAAGAATGGCCTTTTTTAGGAATCATTCAAACGAACCAGGTTCTCATGGTGTATTGGAAGATAAAGGCCATGGACAAGTTACCGATAGAACTCACACCTCTGCAGGAAATGACGAAGAGGACATGGGTACAGATAAAGAATTTAATATGA

Protein sequence

MAGLVEGSLINLYPIKVEHERFDRPPPPPPPPLSIIFLNSFRFFSPLPDNPTRFNSSLFALSPIYFRRLTIGAFHRNRINFYPLRSFHLDQSNFIFFTFCLPSQEEWPFLGIIQTNQVLMVYWKIKAMDKLPIELTPLQEMTKRTWVQIKNLI*
Homology
[Close]
BLAST of Csa6G434300 vs. TrEMBL
Match: A0A0A0KEK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434300 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.7e-85
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MAGLVEGSLINLYPIKVEHERFDRPPPPPPPPLSIIFLNSFRFFSPLPDNPTRFNSSLFA 60
           MAGLVEGSLINLYPIKVEHERFDRPPPPPPPPLSIIFLNSFRFFSPLPDNPTRFNSSLFA
Sbjct: 1   MAGLVEGSLINLYPIKVEHERFDRPPPPPPPPLSIIFLNSFRFFSPLPDNPTRFNSSLFA 60

Query: 61  LSPIYFRRLTIGAFHRNRINFYPLRSFHLDQSNFIFFTFCLPSQEEWPFLGIIQTNQVLM 120
           LSPIYFRRLTIGAFHRNRINFYPLRSFHLDQSNFIFFTFCLPSQEEWPFLGIIQTNQVLM
Sbjct: 61  LSPIYFRRLTIGAFHRNRINFYPLRSFHLDQSNFIFFTFCLPSQEEWPFLGIIQTNQVLM 120

Query: 121 VYWKIKAMDKLPIELTPLQEMTKRTWVQIKNLI 154
           VYWKIKAMDKLPIELTPLQEMTKRTWVQIKNLI
Sbjct: 121 VYWKIKAMDKLPIELTPLQEMTKRTWVQIKNLI 153

[Close]
BLAST of Csa6G434300 vs. NCBI nr
Match: gi|700192906|gb|KGN48110.1| (hypothetical protein Csa_6G434300 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 9.6e-85
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MAGLVEGSLINLYPIKVEHERFDRPPPPPPPPLSIIFLNSFRFFSPLPDNPTRFNSSLFA 60
           MAGLVEGSLINLYPIKVEHERFDRPPPPPPPPLSIIFLNSFRFFSPLPDNPTRFNSSLFA
Sbjct: 1   MAGLVEGSLINLYPIKVEHERFDRPPPPPPPPLSIIFLNSFRFFSPLPDNPTRFNSSLFA 60

Query: 61  LSPIYFRRLTIGAFHRNRINFYPLRSFHLDQSNFIFFTFCLPSQEEWPFLGIIQTNQVLM 120
           LSPIYFRRLTIGAFHRNRINFYPLRSFHLDQSNFIFFTFCLPSQEEWPFLGIIQTNQVLM
Sbjct: 61  LSPIYFRRLTIGAFHRNRINFYPLRSFHLDQSNFIFFTFCLPSQEEWPFLGIIQTNQVLM 120

Query: 121 VYWKIKAMDKLPIELTPLQEMTKRTWVQIKNLI 154
           VYWKIKAMDKLPIELTPLQEMTKRTWVQIKNLI
Sbjct: 121 VYWKIKAMDKLPIELTPLQEMTKRTWVQIKNLI 153

The following BLAST results are available for this feature:
BLAST of Csa6G434300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEK3_CUCSA6.7e-85100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434300 PE=4 SV=1[more]
BLAST of Csa6G434300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192906|gb|KGN48110.1|9.6e-85100.00hypothetical protein Csa_6G434300 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G434300.1Csa6G434300.1mRNA