ClCG02G022990 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G022990
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 37414395 .. 37416796 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCGAGTAGGATAACTTTAGGGCTAATTCGTCGGGTGCGGCAAGGAGGTCAAAATGGGGTCCGACCCATTCCTTTCTCTTTCATTGATCTGGGTTGTGCAAATGAAATATTTTTCTGGTTGATTCACCAAGCTCGCATGAGGATCCTGAAATGGGTTCTAGCCCATTCTTCCATTGATTCGATGAGTGCTTGGAATGGGCTTTTCCTCTTTCCATGGACTTCCTATTGGACCTTACACATTGTTTTAGACTATAAATATCCTTCTTGAATTGATTTAATGTCCGCTGAGCTTATCAGGACAATTTTGCCTAAAGGTCCAAAATTACCCATAACAACATGTAGTGCTCCTTGACACTTGATCCTCACTCTTGACTCTTGCTCCTCTCGATATGCACTCTAGCTCTTGATGGCTCAACACTTGCTCTCGTGAATCATCTCCTTATATTTCTAATTTGAATAGACGTGTAACATTTAATTTATTATTTATTGTAATGTTTCATTTATTATGGCATGTGTTGAGGGTTTTATCAAATCATAATAACTAAATTATAACATTTAAAATCACAGAGACAAAATTCTAATTTTCTACAAATCACAATGACAAAATTCATAATTTATCCTAAAATAAACAACTATTGTGTTGCTAAAATCATGAGCATCCACTTGTGTTTGTAACTTAAAAGTTTGCAAGGCGATTTGAACAACAAATCTCAGCCAACACACACTATAGGTAATTGAGCTATGATTCTCAAATATTTAAAAAAAAAAAAAAATTAATACCGCTTTGGTCAATTTACTATTTGTCATGTGAGTTTGATCCCTCTTGTCAAAACAAATAGCGTAAATTATTTTTTAAAAAAGAAAACAGTAAGCATGTTTTCTTTTATTTTTCAAAAAATATACCCAATTCTCATTGCAATGGGTAAAAAAGTGTTTGAAGGTCTCACAACGATAAACCTTGAACGTGAGAACTTGTTCTACAATGCTCTCCCCTCTATCCATATTGGTTTTCTTTACACATGTCTATTGTTTTATTTGTTAAGAAGAAAACAAGAAAAAATAAGTGTTTGTCAATCTATGCACACCATAAGTTACACTAAAAGATCATATATGTATAAGATTATAAAAAATAATAATAATAAAAAAAGAAAAAAAAGTAAAATGATAATAAGTTTATAAAAAGATTAAATTCATGTGCAATCTATAATAATAAATAAATAGGATTTTTTTAGTTCAATTAATCGTTATCCATAATTATTTGTAAAAGTCAAAATAAGCATAGCTTAAGTTTGAGAGTGGATACTATCGGTAATTGATATTATCTTTTTTCCCTAAGGTCGAATGTTCAATCCCCCACCTACTGCACTAATAAAACATTTGCAGACAAAAAATGTTACGTACAAACAAATTTATACTCTGGTTCTAAATTTTGTTTTACATCAAATTACACTACAAGTTCAAACAACTGACAAAGATTTAAATAAAAACACATTTGACAATTGATTGTCAAAATTTGTAATTCGTGATAGAGTTATTGCATTGTTAATTTATGCATTAATTAAAACAAATAAATTATAATTTTAGCTCTCTAGATGAATAATATAAATATCGATGAGTTATAAAAAAATTAGTTTTTTAAGGTTTAATTTGAAAATAATTGGTGGATGGAGAAAATAACTACAAGATAATGAAGATCGAGGGCCATCTATTAACCAAGAGAGAAACTAAAAATGTTCTAAAAAAGAAAAAAAAAGGAAATTAAAAAGAAGAGAAAAAGAGTTAAAATGAAAAAAGAAAAGAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAAAAAATCCCTGAGGGCAGCCCCCATGACATCCCCTCAATTATCTGAGAATTCCTAATTCCTCCCTTTTCATAAACACCTATCTCTCTCGGAAACAATCCTCGTTAAATCAACCACAAAAGAGGAAAAAAGAAAAAAAGAAAAAAAGAAAAAAAAGAAAAAAGGAAAAAACGAGAGGAAGGTTAAACGAAATAGAATTTCACTCTTTTTCATCTTCTTCTTCCTCCTCCTAAATCTGTTGTTAACGTTGCCACCTGGCGCATCTCAGCCGCCGCCGCCGCCACCGCCGTCGTCGACGACCTTTTTGAATTTCTTTCGATTTTCCCTCCCATACCTGATAACCCGAGCCGATTCAATTCCTCATTGTTCGCCTTGTCGCCGATTCAGTTCCGGCGACTCACAATTGGCGCCGTCGATAGGAATAGGATAACTCTAAGCCTCTGCGTTATTTCCATCTTGATTAGTCAAACTTCATTCTCTCTTCTTCTTGCCTTCTGAAGGTGAGGAACTTACTTTTGTTTTCGATCATCTTTTTCCGTCTGCTTCCCGATCGTTCATTCCGCCGTAA

mRNA sequence

ATGGGAGCGAGTAGGATAACTTTAGGGCTAATTCGTCGGGTGCGGCAAGGAGGTCAAAATGGGGTCCGACCCATTCCTTTCTCTTTCATTGATCTGGGTTGTGCAAATGAAATATTTTTCTGGTTGATTCACCAAGCTCGCATGAGGATCCTGAAATGGGTTCTAGCCCATTCTTCCATTGATTCGATGACCGCCGCCGCCGCCACCGCCGTCGTCGACGACCTTTTTGAATTTCTTTCGATTTTCCCTCCCATACCTGATAACCCGAGCCGATTCAATTCCTCATTGTTCGCCTTGTCGCCGATTCAGTTCCGGCGACTCACAATTGGCGCCGTCGATAGGAATAGGATAACTCTAAGCCTCTGCGTTATTTCCATCTTGATTAGTGAGGAACTTACTTTTGTTTTCGATCATCTTTTTCCGTCTGCTTCCCGATCGTTCATTCCGCCGTAA

Coding sequence (CDS)

ATGGGAGCGAGTAGGATAACTTTAGGGCTAATTCGTCGGGTGCGGCAAGGAGGTCAAAATGGGGTCCGACCCATTCCTTTCTCTTTCATTGATCTGGGTTGTGCAAATGAAATATTTTTCTGGTTGATTCACCAAGCTCGCATGAGGATCCTGAAATGGGTTCTAGCCCATTCTTCCATTGATTCGATGACCGCCGCCGCCGCCACCGCCGTCGTCGACGACCTTTTTGAATTTCTTTCGATTTTCCCTCCCATACCTGATAACCCGAGCCGATTCAATTCCTCATTGTTCGCCTTGTCGCCGATTCAGTTCCGGCGACTCACAATTGGCGCCGTCGATAGGAATAGGATAACTCTAAGCCTCTGCGTTATTTCCATCTTGATTAGTGAGGAACTTACTTTTGTTTTCGATCATCTTTTTCCGTCTGCTTCCCGATCGTTCATTCCGCCGTAA

Protein sequence

MGASRITLGLIRRVRQGGQNGVRPIPFSFIDLGCANEIFFWLIHQARMRILKWVLAHSSIDSMTAAAATAVVDDLFEFLSIFPPIPDNPSRFNSSLFALSPIQFRRLTIGAVDRNRITLSLCVISILISEELTFVFDHLFPSASRSFIPP
Homology
[Close]
BLAST of ClCG02G022990 vs. TrEMBL
Match: A0A0A0KEK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434300 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-07
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 

Query: 82  FPPIPDNPSRFNSSLFALSPIQFRRLTIGAVDRNRI 118
           F P+PDNP+RFNSSLFALSPI FRRLTIGA  RNRI
Sbjct: 44  FSPLPDNPTRFNSSLFALSPIYFRRLTIGAFHRNRI 79

[Close]
BLAST of ClCG02G022990 vs. NCBI nr
Match: gi|700192906|gb|KGN48110.1| (hypothetical protein Csa_6G434300 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-07
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 

Query: 82  FPPIPDNPSRFNSSLFALSPIQFRRLTIGAVDRNRI 118
           F P+PDNP+RFNSSLFALSPI FRRLTIGA  RNRI
Sbjct: 44  FSPLPDNPTRFNSSLFALSPIYFRRLTIGAFHRNRI 79

The following BLAST results are available for this feature:
BLAST of ClCG02G022990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEK3_CUCSA1.4e-0783.33Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434300 PE=4 SV=1[more]
BLAST of ClCG02G022990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192906|gb|KGN48110.1|2.1e-0783.33hypothetical protein Csa_6G434300 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G022990.1ClCG02G022990.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G022990Csa6G434300Cucumber (Chinese Long) v2cuwcgB438
ClCG02G022990Cla97C02G049070Watermelon (97103) v2wcgwmbB138
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G022990Wax gourdwcgwgoB283
ClCG02G022990Wax gourdwcgwgoB323
ClCG02G022990Watermelon (Charleston Gray)wcgwcgB122
ClCG02G022990Cucumber (Gy14) v1cgywcgB197
ClCG02G022990Cucurbita maxima (Rimu)cmawcgB052
ClCG02G022990Cucurbita maxima (Rimu)cmawcgB105
ClCG02G022990Cucurbita maxima (Rimu)cmawcgB489
ClCG02G022990Cucurbita maxima (Rimu)cmawcgB541
ClCG02G022990Cucurbita moschata (Rifu)cmowcgB043
ClCG02G022990Cucurbita moschata (Rifu)cmowcgB095
ClCG02G022990Cucurbita moschata (Rifu)cmowcgB490
ClCG02G022990Cucurbita moschata (Rifu)cmowcgB538
ClCG02G022990Wild cucumber (PI 183967)cpiwcgB037
ClCG02G022990Wild cucumber (PI 183967)cpiwcgB459
ClCG02G022990Cucumber (Chinese Long) v2cuwcgB034
ClCG02G022990Melon (DHL92) v3.5.1mewcgB238
ClCG02G022990Melon (DHL92) v3.5.1mewcgB376
ClCG02G022990Watermelon (97103) v1wcgwmB182
ClCG02G022990Watermelon (97103) v1wcgwmB197
ClCG02G022990Cucurbita pepo (Zucchini)cpewcgB255
ClCG02G022990Cucurbita pepo (Zucchini)cpewcgB320
ClCG02G022990Cucurbita pepo (Zucchini)cpewcgB595
ClCG02G022990Cucurbita pepo (Zucchini)cpewcgB644
ClCG02G022990Bottle gourd (USVL1VR-Ls)lsiwcgB054
ClCG02G022990Bottle gourd (USVL1VR-Ls)lsiwcgB360
ClCG02G022990Cucumber (Gy14) v2cgybwcgB403
ClCG02G022990Melon (DHL92) v3.6.1medwcgB370
ClCG02G022990Silver-seed gourdcarwcgB0453
ClCG02G022990Silver-seed gourdcarwcgB0503
ClCG02G022990Silver-seed gourdcarwcgB0900
ClCG02G022990Cucumber (Chinese Long) v3cucwcgB037
ClCG02G022990Cucumber (Chinese Long) v3cucwcgB459
ClCG02G022990Watermelon (97103) v2wcgwmbB152