Csa6G409330 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G409330
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPantothenate synthetase; contains IPR003721 (Pantoate-beta-alanine ligase)
LocationChr6 : 18792764 .. 18794360 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGGAGGAGTCAGGGTATCATAATTACAGACAAGTACCAGATGAGGACATGGGCGAGATCCATGAGACACAATTCCATTGCTCTCGTTCCCACCATGGGTTTCCTTCATGACGGCCATCTCTCTCTAATCCAAGAAGCTCACAACCATGCACAACTTGTTGTCGTCTCTATCTACGTTAACCCTAGCCAATTTGCCCCTTCCGAGGATCTCTCAACCTATCCTTCAGATTTCGACGCCGACATTCGGAAGCTCATGACTGTTCCTGGAGGAGTTGATGTCATTTTCCATCCTCACAATCTCTATGACTATGGAGTTGAATCAGCTATGGATTGTGCTGGAATGGCCAACGTTTCTTGCTTGGAGGAATCCGGTTCAGGGCATGAGACATGGGTGAGGGTTGAGCGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCCTGTTTTCTTTAGAGGGGTTGCTACGGTTGTTGCTAAGTTATTCAATATTGTTGACCCTGATGTTGCCTTGTTTGGGAAGAAGGATTATCAGCAATGGCGGATTATCGACCGGATGGTGAGTCTTTTTAATAGTGTGAATGGTTTTGATTTTCATATCTGTTTTTGAGCTCAAACTTCATTGTTTTTCATCTGAAATCCTAACTTGATTGCTTTTCTATGATTTATGAACTTAATTTGCATTAAGTCACTAAATCTTGCATGTCTGTAAAACTATCTTCTAAACTTGAAAAGCTTATTCCATCAATACTATTAGATGAACTGGTAGTTAGGTTCTCAAGAATACTAAATCTTTCATGTGTGCAATATGCCCTGCAGGGAATGGCTTGAACTCCCGTTCCTTGAACTTTATTCAGTTCTGATTCGTATAGTTTAAATTTTGGGTTGGGTAACAAGCTTCGCTTACCATCCTTAGTTATTGTGTTTTTACCCACCATTATGATGATTCCAATCAAGGGCTCCCTTAATGTTTATAAGATAGATGAGTCAATTCTCTTATTACCAATTTAAAAGAAGCCTCATGCTATCTATATGGTATCATATCCATAAAGCTAAAATGAATATTCAATTCATTAAAAATTTAAATTTTGATCCAAGAATAGTGAACCCAAAAGGGGTACTATCTTGAAAAGGGTCATGTTGAGAATGTCAAACTAAAAAATCTAACGACCTCATAATGTTTATAAGGTAGATGAACTAATCCTCTCATTAATAAATGATTTTGAAAAGGAATCTCATGTTATCTAATAATTTGTTGTCATTTGATTAACAAAAGCATATATTTATTACCACTGGTGACAAGGCAACATCTCTCACTTCAGCTTTCTTCCAGGTTCGAGATCTTGATTTTCCTGTAAAAATTGTGGGGTTTGAAATCGTGCGGGATGCTGATGGTCTTGCTATGAGTTCTCGCAATGTGCGGCTCTCACCTATAGAAAGACAAAAGGTTCTCTTCAAATTATAGTGTAGTAGTGGGTTCAAAGTGCAAAGCATATTGGCTTTATCGTTCATGATCAAATGATTACTTAGATTTAGAAATTGATTTACTTATTCTCATCTTTCGTCTATAGGCATTGTCTATAAACAGATCATTGTAA

mRNA sequence

ATGGCGAGGAGGAGTCAGGGTATCATAATTACAGACAAGTACCAGATGAGGACATGGGCGAGATCCATGAGACACAATTCCATTGCTCTCGTTCCCACCATGGGTTTCCTTCATGACGGCCATCTCTCTCTAATCCAAGAAGCTCACAACCATGCACAACTTGTTGTCGTCTCTATCTACGTTAACCCTAGCCAATTTGCCCCTTCCGAGGATCTCTCAACCTATCCTTCAGATTTCGACGCCGACATTCGGAAGCTCATGACTGTTCCTGGAGGAGTTGATGTCATTTTCCATCCTCACAATCTCTATGACTATGGAGTTGAATCAGCTATGGATTGTGCTGGAATGGCCAACGTTTCTTGCTTGGAGGAATCCGGTTCAGGGCATGAGACATGGGTGAGGGTTGAGCGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCCTGTTTTCTTTAGAGGGGTTGCTACGGTTGTTGCTAAGTTATTCAATATTGTTGACCCTGATGTTGCCTTGTTTGGGAAGAAGGATTATCAGCAATGGCGGATTATCGACCGGATGGTTCGAGATCTTGATTTTCCTGTAAAAATTGTGGGGTTTGAAATCGTGCGGGATGCTGATGGTCTTGCTATGAGTTCTCGCAATGTGCGGCTCTCACCTATAGAAAGACAAAAGGCATTGTCTATAAACAGATCATTGTAA

Coding sequence (CDS)

ATGGCGAGGAGGAGTCAGGGTATCATAATTACAGACAAGTACCAGATGAGGACATGGGCGAGATCCATGAGACACAATTCCATTGCTCTCGTTCCCACCATGGGTTTCCTTCATGACGGCCATCTCTCTCTAATCCAAGAAGCTCACAACCATGCACAACTTGTTGTCGTCTCTATCTACGTTAACCCTAGCCAATTTGCCCCTTCCGAGGATCTCTCAACCTATCCTTCAGATTTCGACGCCGACATTCGGAAGCTCATGACTGTTCCTGGAGGAGTTGATGTCATTTTCCATCCTCACAATCTCTATGACTATGGAGTTGAATCAGCTATGGATTGTGCTGGAATGGCCAACGTTTCTTGCTTGGAGGAATCCGGTTCAGGGCATGAGACATGGGTGAGGGTTGAGCGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCCTGTTTTCTTTAGAGGGGTTGCTACGGTTGTTGCTAAGTTATTCAATATTGTTGACCCTGATGTTGCCTTGTTTGGGAAGAAGGATTATCAGCAATGGCGGATTATCGACCGGATGGTTCGAGATCTTGATTTTCCTGTAAAAATTGTGGGGTTTGAAATCGTGCGGGATGCTGATGGTCTTGCTATGAGTTCTCGCAATGTGCGGCTCTCACCTATAGAAAGACAAAAGGCATTGTCTATAAACAGATCATTGTAA

Protein sequence

MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL*
Homology
[Close]
BLAST of Csa6G409330 vs. Swiss-Prot
Match: PANC_LOTJA (Pantoate--beta-alanine ligase OS=Lotus japonicus GN=PANC PE=1 SV=3)

HSP 1 Score: 337.0 bits (863), Expect = 1.6e-91
Identity = 160/231 (69.26%), Postives = 194/231 (83.98%), Query Frame = 1 

Query: 8   IIITDKYQMRTWARSMRHNS--IALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQ 67
           ++I+DK +MR W+RSMR     IALVPTMGFLH+GHLSL+++AHNHA LV VSIYVNP Q
Sbjct: 4   MVISDKDEMRKWSRSMRSQGKLIALVPTMGFLHEGHLSLVRDAHNHADLVAVSIYVNPGQ 63

Query: 68  FAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVE---SAMDCAGMANVSCL 127
           F+P+EDLS YPSDF  D++KLM+VPGGVDV+FHPHNLYDYG +   +  +C G   VSC+
Sbjct: 64  FSPTEDLSAYPSDFQGDLQKLMSVPGGVDVVFHPHNLYDYGGDGGDAVAECGGDGVVSCV 123

Query: 128 EE-SGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQWR 187
           +  SG GHETWVR E+LEK +CG+SRPVFFRGVAT+V KLFNIV+PDVA+FGKKDYQQW+
Sbjct: 124 DRRSGFGHETWVRAEKLEKPLCGKSRPVFFRGVATIVTKLFNIVEPDVAVFGKKDYQQWK 183

Query: 188 IIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           II RMVRDLDF +K++G E++R+ DGLAMSSRNV LSP ER+KA+SIN+SL
Sbjct: 184 IIQRMVRDLDFSIKVIGSEVIREKDGLAMSSRNVYLSPEEREKAVSINKSL 234

[Close]
BLAST of Csa6G409330 vs. Swiss-Prot
Match: PANC_ARATH (Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.6e-81
Identity = 152/230 (66.09%), Postives = 180/230 (78.26%), Query Frame = 1 

Query: 9   IITDKYQMRTWARSMRHN--SIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQF 68
           +I DK  MR W+R+MR    +I LVPTMG+LH+GHLSL++++     + VVSIYVNP QF
Sbjct: 5   VIRDKDSMRKWSRAMRSQGKTIGLVPTMGYLHEGHLSLVRQSLALTDVTVVSIYVNPGQF 64

Query: 69  APSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMAN----VSCL 128
           +P+EDLSTYPSDF  D+ KL  + GG  V+F+P NLYDYG E+     G  N    VSC+
Sbjct: 65  SPTEDLSTYPSDFSGDLTKLAALSGGKVVVFNPKNLYDYGGETKKINDGGGNGGRVVSCV 124

Query: 129 EESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQWRI 188
           EE G GHETW+RVERLEKG CG+SRPVFFRGVAT+V KLFNIV+PDVALFGKKDYQQWRI
Sbjct: 125 EEGGLGHETWIRVERLEKGFCGKSRPVFFRGVATIVTKLFNIVEPDVALFGKKDYQQWRI 184

Query: 189 IDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           I RMVRDL+F ++IVG +I R+ DGLAMSSRNVRLS  ERQ+ALSI+RSL
Sbjct: 185 IQRMVRDLNFGIEIVGSDIAREKDGLAMSSRNVRLSDEERQRALSISRSL 234

[Close]
BLAST of Csa6G409330 vs. Swiss-Prot
Match: PANC_ORYSJ (Pantoate--beta-alanine ligase OS=Oryza sativa subsp. japonica GN=PANC PE=2 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 1.5e-76
Identity = 154/239 (64.44%), Postives = 182/239 (76.15%), Query Frame = 1 

Query: 1   MARRSQGIIITDKYQMRTWARSMRHN--SIALVPTMGFLHDGHLSLIQEAHNHAQL---- 60
           MA   +  +I DK  MR W+R  R    ++A+VPTMG+LH GHLSLI  A   A      
Sbjct: 1   MAAPREPEVIRDKAAMRAWSRRRRAEGKTVAVVPTMGYLHQGHLSLISAAAAAASADPVA 60

Query: 61  VVVSIYVNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCA 120
           +VV+IYVNPSQFAPSEDL+TYPSDF  D+RKL +  G VD +F+P +LY  G       +
Sbjct: 61  IVVTIYVNPSQFAPSEDLATYPSDFAGDLRKLAST-GVVDAVFNPPDLYVRGAGRRGAAS 120

Query: 121 GMANVSCLEES-GSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFG 180
           G A +SCLEE+ G GHETWVRVERLEKGMCG SRPVFFRGVAT+V+KLFNI++PDVA+FG
Sbjct: 121 GGA-ISCLEEAAGDGHETWVRVERLEKGMCGASRPVFFRGVATIVSKLFNIIEPDVAVFG 180

Query: 181 KKDYQQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           KKDYQQWR+I RMVRDLDF ++I+G EIVR+ADGLAMSSRNV LS  ER+KALSI+RSL
Sbjct: 181 KKDYQQWRVICRMVRDLDFAIEIIGSEIVREADGLAMSSRNVHLSREEREKALSISRSL 237

[Close]
BLAST of Csa6G409330 vs. Swiss-Prot
Match: PANC_GEOBB (Pantothenate synthetase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=panC PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.3e-52
Identity = 113/225 (50.22%), Postives = 145/225 (64.44%), Query Frame = 1 

Query: 8   IIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQFA 67
           I+I    QM+ +AR  R   IALVPTMG+LH+GH SL+ EA   A+ VV SI+VNP+QF 
Sbjct: 2   IVIHSVAQMQQYARDKR-GEIALVPTMGYLHEGHASLMVEARKRAKYVVASIFVNPTQFG 61

Query: 68  PSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVSCLEESGS 127
            +EDL +YP D + D  K +    GVDVIF P                       E    
Sbjct: 62  VNEDLDSYPRDLEHD--KEIAAKAGVDVIFAP--------------------IAAEMYPE 121

Query: 128 GHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQWRIIDRMV 187
           G+++++ VE +   +CG SRP  FRGV TVVAKLFNIV P VALFGKKD+QQ  ++ RMV
Sbjct: 122 GYQSYLNVEEISAHLCGASRPGHFRGVTTVVAKLFNIVAPKVALFGKKDFQQLAVLRRMV 181

Query: 188 RDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           +D +F ++IVG  IVR+ADGLAMSSRN +LSP+ER+KAL ++RS+
Sbjct: 182 QDFNFDLEIVGMPIVREADGLAMSSRNTKLSPVEREKALCLSRSI 203

[Close]
BLAST of Csa6G409330 vs. Swiss-Prot
Match: PANC_GEOSM (Pantothenate synthetase OS=Geobacter sp. (strain M21) GN=panC PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-50
Identity = 111/225 (49.33%), Postives = 142/225 (63.11%), Query Frame = 1 

Query: 8   IIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQFA 67
           I+I    QM+ +AR  R   IALVPTMG+LH+GH SL+ EA   A+ VV SI+VNP+QF 
Sbjct: 2   IVIHSVAQMQQYARE-RRGDIALVPTMGYLHEGHASLMVEARKRAKYVVASIFVNPTQFG 61

Query: 68  PSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVSCLEESGS 127
            +EDL +YP D + D  K +    GVDVIF P                    +  +    
Sbjct: 62  INEDLDSYPRDLEHD--KEIAAKAGVDVIFAP--------------------TAADMYPD 121

Query: 128 GHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQWRIIDRMV 187
            +++++ VE +   +CG SRP  FRGV TVVAKLFNIV P VA FGKKD+QQ  +I RMV
Sbjct: 122 RYQSYLNVEEITVHLCGASRPGHFRGVTTVVAKLFNIVAPKVAFFGKKDFQQLAVIRRMV 181

Query: 188 RDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           RD +F ++IVG  IVR+ DGLAMSSRN +LSP ER+KAL ++RS+
Sbjct: 182 RDFNFDIEIVGMPIVREKDGLAMSSRNTKLSPAEREKALCLSRSI 203

[Close]
BLAST of Csa6G409330 vs. TrEMBL
Match: A0A0A0KJD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G409330 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 3.0e-129
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 

Query: 1   MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY 60
           MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY
Sbjct: 1   MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY 60

Query: 61  VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS 120
           VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS
Sbjct: 61  VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS 120

Query: 121 CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW 180
           CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW
Sbjct: 121 CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW 180

Query: 181 RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL
Sbjct: 181 RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 232

[Close]
BLAST of Csa6G409330 vs. TrEMBL
Match: A0A0A0LBL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G625640 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.1e-107
Identity = 196/219 (89.50%), Postives = 207/219 (94.52%), Query Frame = 1 

Query: 1   MARR-SQGIIITDKYQMRTWARSMRH--NSIALVPTMGFLHDGHLSLIQEAHNHAQLVVV 60
           MAR+ +Q IIITDKYQMRTWAR+MR   N+IALVPTMGFLHDGHLSLIQEAHNH+QLVVV
Sbjct: 173 MARKENQTIIITDKYQMRTWARTMRSLSNTIALVPTMGFLHDGHLSLIQEAHNHSQLVVV 232

Query: 61  SIYVNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMA 120
           SIYVNPSQFAPSEDLSTYPSDFD DIRKLM VPGGVDV+FHPHNLYDYGVESAMDCAGM 
Sbjct: 233 SIYVNPSQFAPSEDLSTYPSDFDGDIRKLMDVPGGVDVVFHPHNLYDYGVESAMDCAGMP 292

Query: 121 NVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDY 180
           +VSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVA+FGKKDY
Sbjct: 293 DVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVAVFGKKDY 352

Query: 181 QQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVR 217
           QQWRII RMVRDLDF + +VGFEIVRDADGLAMSSRN +
Sbjct: 353 QQWRIIRRMVRDLDFSINVVGFEIVRDADGLAMSSRNCK 391

[Close]
BLAST of Csa6G409330 vs. TrEMBL
Match: M5VKJ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008786mg PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.2e-92
Identity = 170/238 (71.43%), Postives = 198/238 (83.19%), Query Frame = 1 

Query: 9   IITDKYQMRTWARSMRHN--SIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQF 68
           II DK QMR W+R+MR    ++ LVPTMG+LHDGH+SLI+EAHNH  L+VVSIYVNP QF
Sbjct: 8   IIRDKDQMRRWSRAMRSQGKTVGLVPTMGYLHDGHVSLIREAHNHTDLIVVSIYVNPGQF 67

Query: 69  APSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMAN-------- 128
           +PSEDLSTYPSDF  DI+KLM VPGGVDV+F+PHNLYDYG     + A  A+        
Sbjct: 68  SPSEDLSTYPSDFHGDIQKLMAVPGGVDVVFNPHNLYDYGTSKNANAAARASDDARVGNG 127

Query: 129 ----VSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGK 188
               VSC+EE+G GHETWVRVERLEKGMCG+SRPVFFRGVATVV+KLFNIV+PDVA+FGK
Sbjct: 128 GNGVVSCVEENGLGHETWVRVERLEKGMCGQSRPVFFRGVATVVSKLFNIVEPDVAVFGK 187

Query: 189 KDYQQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           KDYQQWRII RMVRDLDF ++++G EIVR+ DGLAMSSRNVRLSP ER+KALSI++SL
Sbjct: 188 KDYQQWRIIQRMVRDLDFGIRVIGSEIVREKDGLAMSSRNVRLSPEEREKALSISKSL 245

[Close]
BLAST of Csa6G409330 vs. TrEMBL
Match: F6HZY6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g05780 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 6.5e-92
Identity = 171/234 (73.08%), Postives = 192/234 (82.05%), Query Frame = 1 

Query: 9   IITDKYQMRTWARSMRHN--SIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQF 68
           II DK +MR W+R MR    +I LVPTMG+LH GH+SLI+EAH H  L+VVSIYVNP QF
Sbjct: 11  IIRDKDEMRRWSRRMRSQGKTIGLVPTMGYLHQGHISLIKEAHKHTDLIVVSIYVNPGQF 70

Query: 69  APSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVES----AMDC----AGMAN 128
           APSEDLSTYPSDF  D++KLM VPGGVD +FHPHNLYDYG       + DC     G   
Sbjct: 71  APSEDLSTYPSDFHGDLQKLMAVPGGVDAVFHPHNLYDYGSVGGGGRSGDCDVREEGKGV 130

Query: 129 VSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQ 188
           +SCLEE G GHETWVRVERLEK MCG+SRPVFFRGVAT+V+KLFNIV+PDVA+FGKKDYQ
Sbjct: 131 ISCLEERGFGHETWVRVERLEKSMCGKSRPVFFRGVATIVSKLFNIVEPDVAVFGKKDYQ 190

Query: 189 QWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           QWRII RMVRDLDF +K++G EIVRDADGLAMSSRNV LSP ER+KALSINRSL
Sbjct: 191 QWRIISRMVRDLDFAIKVIGSEIVRDADGLAMSSRNVHLSPEEREKALSINRSL 244

[Close]
BLAST of Csa6G409330 vs. TrEMBL
Match: W9S339_9ROSA (Pantoate--beta-alanine ligase OS=Morus notabilis GN=L484_015198 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-90
Identity = 172/236 (72.88%), Postives = 195/236 (82.63%), Query Frame = 1 

Query: 9   IITDKYQMRTWARSMRHN--SIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQF 68
           IITDK QMR W+R MR    +I  VPTMGFLH+GH++L++EA NHA LVVVSIYVNP QF
Sbjct: 8   IITDKTQMRKWSRGMRSQGKTIGFVPTMGFLHEGHIALVKEARNHADLVVVSIYVNPGQF 67

Query: 69  APSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYG-----VESAMDCAG-----M 128
           +PSEDLSTYPSD + DI+KLM VPGGVDV+FHPHNLYDYG     VE+     G     +
Sbjct: 68  SPSEDLSTYPSDINGDIQKLMAVPGGVDVVFHPHNLYDYGTTNPSVENVNGSGGDEERNV 127

Query: 129 ANVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKD 188
             VSCLE +G GHETWV+VERLEKGMCG+SRPVFFRGVATVV KLFNIVDPDVALFGKKD
Sbjct: 128 GVVSCLENNGLGHETWVKVERLEKGMCGKSRPVFFRGVATVVTKLFNIVDPDVALFGKKD 187

Query: 189 YQQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           YQQ RII RMVRDLDF +KI+G EIVR++DGLAMSSRNV LSP ER++ALSI+RSL
Sbjct: 188 YQQLRIIQRMVRDLDFAIKIIGSEIVRESDGLAMSSRNVHLSPEEREQALSISRSL 243

[Close]
BLAST of Csa6G409330 vs. TAIR10
Match: AT5G48840.1 (AT5G48840.1 homolog of bacterial PANC)

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-82
Identity = 152/230 (66.09%), Postives = 180/230 (78.26%), Query Frame = 1 

Query: 9   IITDKYQMRTWARSMRHN--SIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIYVNPSQF 68
           +I DK  MR W+R+MR    +I LVPTMG+LH+GHLSL++++     + VVSIYVNP QF
Sbjct: 5   VIRDKDSMRKWSRAMRSQGKTIGLVPTMGYLHEGHLSLVRQSLALTDVTVVSIYVNPGQF 64

Query: 69  APSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMAN----VSCL 128
           +P+EDLSTYPSDF  D+ KL  + GG  V+F+P NLYDYG E+     G  N    VSC+
Sbjct: 65  SPTEDLSTYPSDFSGDLTKLAALSGGKVVVFNPKNLYDYGGETKKINDGGGNGGRVVSCV 124

Query: 129 EESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQWRI 188
           EE G GHETW+RVERLEKG CG+SRPVFFRGVAT+V KLFNIV+PDVALFGKKDYQQWRI
Sbjct: 125 EEGGLGHETWIRVERLEKGFCGKSRPVFFRGVATIVTKLFNIVEPDVALFGKKDYQQWRI 184

Query: 189 IDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           I RMVRDL+F ++IVG +I R+ DGLAMSSRNVRLS  ERQ+ALSI+RSL
Sbjct: 185 IQRMVRDLNFGIEIVGSDIAREKDGLAMSSRNVRLSDEERQRALSISRSL 234

[Close]
BLAST of Csa6G409330 vs. NCBI nr
Match: gi|778716155|ref|XP_004140085.2| (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase-like [Cucumis sativus])

HSP 1 Score: 469.2 bits (1206), Expect = 4.3e-129
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 

Query: 1   MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY 60
           MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY
Sbjct: 1   MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY 60

Query: 61  VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS 120
           VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS
Sbjct: 61  VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS 120

Query: 121 CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW 180
           CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW
Sbjct: 121 CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW 180

Query: 181 RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL
Sbjct: 181 RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 232

[Close]
BLAST of Csa6G409330 vs. NCBI nr
Match: gi|700192672|gb|KGN47876.1| (hypothetical protein Csa_6G409330 [Cucumis sativus])

HSP 1 Score: 469.2 bits (1206), Expect = 4.3e-129
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 

Query: 1   MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY 60
           MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY
Sbjct: 1   MARRSQGIIITDKYQMRTWARSMRHNSIALVPTMGFLHDGHLSLIQEAHNHAQLVVVSIY 60

Query: 61  VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS 120
           VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS
Sbjct: 61  VNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMANVS 120

Query: 121 CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW 180
           CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW
Sbjct: 121 CLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDYQQW 180

Query: 181 RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL
Sbjct: 181 RIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 232

[Close]
BLAST of Csa6G409330 vs. NCBI nr
Match: gi|778682111|ref|XP_004152022.2| (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 1.2e-115
Identity = 212/235 (90.21%), Postives = 222/235 (94.47%), Query Frame = 1 

Query: 1   MARR-SQGIIITDKYQMRTWARSMRH--NSIALVPTMGFLHDGHLSLIQEAHNHAQLVVV 60
           MAR+ +Q IIITDKYQMRTWAR+MR   N+IALVPTMGFLHDGHLSLIQEAHNH+QLVVV
Sbjct: 20  MARKENQTIIITDKYQMRTWARTMRSLSNTIALVPTMGFLHDGHLSLIQEAHNHSQLVVV 79

Query: 61  SIYVNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMA 120
           SIYVNPSQFAPSEDLSTYPSDFD DIRKLM VPGGVDV+FHPHNLYDYGVESAMDCAGM 
Sbjct: 80  SIYVNPSQFAPSEDLSTYPSDFDGDIRKLMDVPGGVDVVFHPHNLYDYGVESAMDCAGMP 139

Query: 121 NVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDY 180
           +VSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVA+FGKKDY
Sbjct: 140 DVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVAVFGKKDY 199

Query: 181 QQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           QQWRII RMVRDLDF + +VGFEIVRDADGLAMSSRNVRLSP ERQKALSINR L
Sbjct: 200 QQWRIIRRMVRDLDFSINVVGFEIVRDADGLAMSSRNVRLSPEERQKALSINRXL 254

[Close]
BLAST of Csa6G409330 vs. NCBI nr
Match: gi|659130281|ref|XP_008465087.1| (PREDICTED: pantoate--beta-alanine ligase [Cucumis melo])

HSP 1 Score: 407.5 bits (1046), Expect = 1.5e-110
Identity = 206/235 (87.66%), Postives = 216/235 (91.91%), Query Frame = 1 

Query: 1   MARR-SQGIIITDKYQMRTWARSMRH--NSIALVPTMGFLHDGHLSLIQEAHNHAQLVVV 60
           MAR+ +Q +IITDK QMRTWA+SMR   N+IALVPTMG LHDGHLSLIQEA NH+ LVVV
Sbjct: 1   MARKENQTLIITDKNQMRTWAKSMRSLLNTIALVPTMGSLHDGHLSLIQEARNHSHLVVV 60

Query: 61  SIYVNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMA 120
           SIYVNPSQFAPSEDLSTYPSDFD DIRKL  VPGGVDV+FHPHNLYDYGVESA DCAGMA
Sbjct: 61  SIYVNPSQFAPSEDLSTYPSDFDGDIRKLNAVPGGVDVVFHPHNLYDYGVESATDCAGMA 120

Query: 121 NVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDY 180
           +VSCLEESGS HETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDY
Sbjct: 121 DVSCLEESGSSHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDY 180

Query: 181 QQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVRLSPIERQKALSINRSL 233
           QQWRII RMVRDLDF + I+GFE VRDADGLAMSSRNVRLSP ERQKALSINRSL
Sbjct: 181 QQWRIIRRMVRDLDFSINILGFETVRDADGLAMSSRNVRLSPEERQKALSINRSL 235

[Close]
BLAST of Csa6G409330 vs. NCBI nr
Match: gi|700203216|gb|KGN58349.1| (hypothetical protein Csa_3G625640 [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-107
Identity = 196/219 (89.50%), Postives = 207/219 (94.52%), Query Frame = 1 

Query: 1   MARR-SQGIIITDKYQMRTWARSMRH--NSIALVPTMGFLHDGHLSLIQEAHNHAQLVVV 60
           MAR+ +Q IIITDKYQMRTWAR+MR   N+IALVPTMGFLHDGHLSLIQEAHNH+QLVVV
Sbjct: 173 MARKENQTIIITDKYQMRTWARTMRSLSNTIALVPTMGFLHDGHLSLIQEAHNHSQLVVV 232

Query: 61  SIYVNPSQFAPSEDLSTYPSDFDADIRKLMTVPGGVDVIFHPHNLYDYGVESAMDCAGMA 120
           SIYVNPSQFAPSEDLSTYPSDFD DIRKLM VPGGVDV+FHPHNLYDYGVESAMDCAGM 
Sbjct: 233 SIYVNPSQFAPSEDLSTYPSDFDGDIRKLMDVPGGVDVVFHPHNLYDYGVESAMDCAGMP 292

Query: 121 NVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVALFGKKDY 180
           +VSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVA+FGKKDY
Sbjct: 293 DVSCLEESGSGHETWVRVERLEKGMCGRSRPVFFRGVATVVAKLFNIVDPDVAVFGKKDY 352

Query: 181 QQWRIIDRMVRDLDFPVKIVGFEIVRDADGLAMSSRNVR 217
           QQWRII RMVRDLDF + +VGFEIVRDADGLAMSSRN +
Sbjct: 353 QQWRIIRRMVRDLDFSINVVGFEIVRDADGLAMSSRNCK 391

The following BLAST results are available for this feature:
BLAST of Csa6G409330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PANC_LOTJA1.6e-9169.26Pantoate--beta-alanine ligase OS=Lotus japonicus GN=PANC PE=1 SV=3[more]
PANC_ARATH2.6e-8166.09Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=1 SV=1[more]
PANC_ORYSJ1.5e-7664.44Pantoate--beta-alanine ligase OS=Oryza sativa subsp. japonica GN=PANC PE=2 SV=2[more]
PANC_GEOBB7.3e-5250.22Pantothenate synthetase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / ... [more]
PANC_GEOSM4.0e-5049.33Pantothenate synthetase OS=Geobacter sp. (strain M21) GN=panC PE=3 SV=1[more]
BLAST of Csa6G409330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJD2_CUCSA3.0e-129100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G409330 PE=4 SV=1[more]
A0A0A0LBL8_CUCSA1.1e-10789.50Uncharacterized protein OS=Cucumis sativus GN=Csa_3G625640 PE=3 SV=1[more]
M5VKJ0_PRUPE2.2e-9271.43Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008786mg PE=3 SV=1[more]
F6HZY6_VITVI6.5e-9273.08Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g05780 PE=3 SV=... [more]
W9S339_9ROSA1.6e-9072.88Pantoate--beta-alanine ligase OS=Morus notabilis GN=L484_015198 PE=3 SV=1[more]
BLAST of Csa6G409330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48840.11.4e-8266.09 homolog of bacterial PANC[more]
BLAST of Csa6G409330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778716155|ref|XP_004140085.2|4.3e-129100.00PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase-like [Cucumis sati... [more]
gi|700192672|gb|KGN47876.1|4.3e-129100.00hypothetical protein Csa_6G409330 [Cucumis sativus][more]
gi|778682111|ref|XP_004152022.2|1.2e-11590.21PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase [Cucumis sativus][more]
gi|659130281|ref|XP_008465087.1|1.5e-11087.66PREDICTED: pantoate--beta-alanine ligase [Cucumis melo][more]
gi|700203216|gb|KGN58349.1|1.6e-10789.50hypothetical protein Csa_3G625640 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003721Pantoate_ligase
IPR004821Cyt_trans-like
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004592pantoate-beta-alanine ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
GO:0009058biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0033317 pantothenate biosynthetic process from valine
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004592 pantoate-beta-alanine ligase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0003824 catalytic activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU127986cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G409330.1Csa6G409330.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU127986CU127986transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003721Pantoate-beta-alanine ligasePANTHERPTHR21299:SF1PANTOATE--BETA-ALANINE LIGASEcoord: 1..111
score: 7.8E-106coord: 129..232
score: 7.8E
IPR003721Pantoate-beta-alanine ligasePFAMPF02569Pantoate_ligasecoord: 9..232
score: 1.7
IPR003721Pantoate-beta-alanine ligaseTIGRFAMsTIGR00018TIGR00018coord: 10..232
score: 8.3
IPR004821Cytidyltransferase-like domainTIGRFAMsTIGR00125TIGR00125coord: 29..72
score: 3.
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 6..199
score: 9.7
NoneNo IPR availableGENE3DG3DSA:3.30.1300.10coord: 201..232
score: 4.3
NoneNo IPR availablePANTHERPTHR21299CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASEcoord: 1..111
score: 7.8E-106coord: 129..232
score: 7.8E
NoneNo IPR availableunknownSSF52374Nucleotidylyl transferasecoord: 8..232
score: 6.7