Csa6G404130 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G404130
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProbable peptide/nitrate transporter; contains IPR000109 (Proton-dependent oligopeptide transporter family)
LocationChr6 : 18146229 .. 18146790 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGTATGTTCATCCCTAAATTCCTTTATGAAAGTCATTGTATAGCTAGGGTCATAAAAATTTCAATAATACGTATCTTACTGAATGAAATTGGTTGGATATGTAGGAAGCCGTGAAGGAGGAGAGCGACGGGAGCATATGGGAAGGGTATGTGGATTGGCGGAAGAGGCCTGCAGCCAAAGGGCGGCATGGGGGAATGATAGCGGCTGGATTCGTATTAGGTTGGTGAATACATACTACATACATACATGCATGCATGTTAGATAATAATGAGTAAACATTTTGATTGAGAGTTAAATTTGGTATTAATTAACTATTATTGCAGGAGTTGAAGTGTTGGAGAATTTGGCGTTCTTGGCAAACGCAAGTAATTTGGTGATGTATTTGAGGAAATATATGGGATTTTCACCGGCGAAATCGGCCAACCATGTCACGACGTTTATGGGAACGGCGTTTCTTCTTGCACTTCTTGGTGGTTTCTTATCGGATGCCATTTTCACAACTTATTACGTCTTCATTTTCTCCTCTTTCATTGAGTTTCTGGTTCGTCTTATTTAA

mRNA sequence

ATGGAAGCCGTGAAGGAGGAGAGCGACGGGAGCATATGGGAAGGGTATGTGGATTGGCGGAAGAGGCCTGCAGCCAAAGGGCGGCATGGGGGAATGATAGCGGCTGGATTCGTATTAGGAGTTGAAGTGTTGGAGAATTTGGCGTTCTTGGCAAACGCAAGTAATTTGGTGATGTATTTGAGGAAATATATGGGATTTTCACCGGCGAAATCGGCCAACCATGTCACGACGTTTATGGGAACGGCGTTTCTTCTTGCACTTCTTGGTGGTTTCTTATCGGATGCCATTTTCACAACTTATTACGTCTTCATTTTCTCCTCTTTCATTGAGTTTCTGGTTCGTCTTATTTAA

Coding sequence (CDS)

ATGGAAGCCGTGAAGGAGGAGAGCGACGGGAGCATATGGGAAGGGTATGTGGATTGGCGGAAGAGGCCTGCAGCCAAAGGGCGGCATGGGGGAATGATAGCGGCTGGATTCGTATTAGGAGTTGAAGTGTTGGAGAATTTGGCGTTCTTGGCAAACGCAAGTAATTTGGTGATGTATTTGAGGAAATATATGGGATTTTCACCGGCGAAATCGGCCAACCATGTCACGACGTTTATGGGAACGGCGTTTCTTCTTGCACTTCTTGGTGGTTTCTTATCGGATGCCATTTTCACAACTTATTACGTCTTCATTTTCTCCTCTTTCATTGAGTTTCTGGTTCGTCTTATTTAA

Protein sequence

MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI*
Homology
[Close]
BLAST of Csa6G404130 vs. Swiss-Prot
Match: PTR19_ARATH (Protein NRT1/ PTR FAMILY 4.6 OS=Arabidopsis thaliana GN=NPF4.6 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-38
Identity = 78/110 (70.91%), Postives = 89/110 (80.91%), Query Frame = 1 

Query: 7   ESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMGF 66
           E + S WEGY DWR R A KGRHGGM+AA FVL VE+LENLA+LANASNLV+YLR+YM  
Sbjct: 4   EEEVSRWEGYADWRNRAAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREYMHM 63

Query: 67  SPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           SP+KSAN VT FMGTAFLLALLGGFLSDA F+T+ +F+ S+ IEFL  +I
Sbjct: 64  SPSKSANDVTNFMGTAFLLALLGGFLSDAFFSTFQIFLISASIEFLGLII 113

[Close]
BLAST of Csa6G404130 vs. Swiss-Prot
Match: PTR54_ARATH (Protein NRT1/ PTR FAMILY 4.7 OS=Arabidopsis thaliana GN=NPF4.7 PE=2 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 2.5e-37
Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 1 

Query: 2   EAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLR 61
           E + E +  S W GYVDWR RPA +GRHGGM+AA FVL VEVLENLAFLANASNLV+YL 
Sbjct: 30  EQMDEANRLSAWNGYVDWRSRPALRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLS 89

Query: 62  KYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
             MGFSP+ +AN VT FMGTAF LALLGGFL+DA FTT+++++ S+ IEFL
Sbjct: 90  TKMGFSPSGAANAVTAFMGTAFFLALLGGFLADAFFTTFHIYLVSAAIEFL 140

[Close]
BLAST of Csa6G404130 vs. Swiss-Prot
Match: PTR12_ARATH (Protein NRT1/ PTR FAMILY 4.5 OS=Arabidopsis thaliana GN=NPF4.5 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-35
Identity = 71/109 (65.14%), Postives = 86/109 (78.90%), Query Frame = 1 

Query: 4   VKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKY 63
           V+   D S WEGY DWR + A +GRHGGM+AA FVL VE+LENLAFLANASNLV+YL+ +
Sbjct: 3   VEMHGDVSKWEGYADWRNKAALRGRHGGMLAASFVLAVEILENLAFLANASNLVLYLKNF 62

Query: 64  MGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
           M  S A+S++ VTTFM TAFLLALLGGFL+DA F+T+ +F+ S+ IEFL
Sbjct: 63  MHMSLARSSSEVTTFMATAFLLALLGGFLADAFFSTFVIFLISASIEFL 111

[Close]
BLAST of Csa6G404130 vs. Swiss-Prot
Match: PTR16_ARATH (Protein NRT1/ PTR FAMILY 4.3 OS=Arabidopsis thaliana GN=NPF4.3 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.7e-18
Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 1 

Query: 5   KEESDGSIWE----GYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 64
           +E S+ + WE      VDWR RP+   +HGGM AA FVLG++  E +   A  +NL+ Y+
Sbjct: 14  EEVSNENNWELAEEESVDWRGRPSNPNKHGGMRAALFVLGLQAFEIMGIAAVGNNLITYV 73

Query: 65  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIE 111
              M F  +K+AN VT F+GT F+ ALLGG+LSDA   +++  I   F+E
Sbjct: 74  INEMHFPLSKAANIVTNFVGTIFIFALLGGYLSDAFLGSFWTIIIFGFVE 123

[Close]
BLAST of Csa6G404130 vs. Swiss-Prot
Match: PTR34_ARATH (Protein NRT1/ PTR FAMILY 4.1 OS=Arabidopsis thaliana GN=NPF4.1 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.7e-18
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 1 

Query: 14  EGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMGFSPAKSAN 73
           E + DWR + A  G+HGG+ AA     VE +EN+ FLA ++N +MY  K M +S  K+A 
Sbjct: 7   EKFEDWRGKEAISGKHGGIKAAFIACVVETMENMVFLACSTNFMMYFTKSMNYSTPKAAT 66

Query: 74  HVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
            VT F+GT+FLL + GGF++D+  T +  F+    IE L
Sbjct: 67  MVTNFVGTSFLLTIFGGFVADSFLTRFAAFVLFGSIELL 105

[Close]
BLAST of Csa6G404130 vs. TrEMBL
Match: A0A0A0KE15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404130 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.4e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60
           MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 116

[Close]
BLAST of Csa6G404130 vs. TrEMBL
Match: A0A072TSL8_MEDTR (Peptide/nitrate transporter plant OS=Medicago truncatula GN=MTR_8g469310 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.5e-40
Identity = 82/107 (76.64%), Postives = 94/107 (87.85%), Query Frame = 1 

Query: 6   EESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMG 65
           E+  G+ W GYVDWR RPA +GRHGGM+AA FVL VEVLENLAFLANASNLV+YLRKYM 
Sbjct: 4   EQQQGTRWIGYVDWRNRPAHRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLRKYMH 63

Query: 66  FSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
           FSP+KSAN+VT FMGTAFLLALLGGFLSDA FTTY++++ S+ IEFL
Sbjct: 64  FSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAVIEFL 110

[Close]
BLAST of Csa6G404130 vs. TrEMBL
Match: A0A087HH02_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G126500 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.2e-39
Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 1 

Query: 4   VKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKY 63
           V+EE  G +WEGY DWR R A KGRHGGM+AA FVL VE+LENLA+LANASNLV+YLR+Y
Sbjct: 3   VEEEQHGDVWEGYADWRNRTAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREY 62

Query: 64  MGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           M  SP+KSAN VT FMGTAFLLALLGGFLSDA F+TY +F+ S+ IEFL  +I
Sbjct: 63  MHLSPSKSANDVTNFMGTAFLLALLGGFLSDAFFSTYIIFLISASIEFLGLII 115

[Close]
BLAST of Csa6G404130 vs. TrEMBL
Match: A0A0B0MSN6_GOSAR (Nitrate transporter 1.2-like protein OS=Gossypium arboreum GN=F383_25809 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-38
Identity = 80/104 (76.92%), Postives = 90/104 (86.54%), Query Frame = 1 

Query: 13  WEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMGFSPAKSA 72
           WEGY DWR RPA KGRHGG+ AA FVL VEVLENLA+LANASNLVMYL KYM  SP+KSA
Sbjct: 12  WEGYADWRNRPALKGRHGGIFAASFVLVVEVLENLAYLANASNLVMYLSKYMHLSPSKSA 71

Query: 73  NHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           N+VT FMGTAFLLALLGGFLSDA FTTY++++ S+FIEFL  +I
Sbjct: 72  NNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAFIEFLGLII 115

[Close]
BLAST of Csa6G404130 vs. TrEMBL
Match: A0A0D2T2L6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G183100 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 7.9e-38
Identity = 79/104 (75.96%), Postives = 89/104 (85.58%), Query Frame = 1 

Query: 13  WEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMGFSPAKSA 72
           WEGY DWR RPA KGRHGG+ AA FVL VEVLENLA+LANASNLVMYL KYM  SP+KSA
Sbjct: 12  WEGYADWRNRPALKGRHGGIFAASFVLVVEVLENLAYLANASNLVMYLSKYMHLSPSKSA 71

Query: 73  NHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           N+VT FMGTAFLLALLGGFLSDA FTTY++++ S+F EFL  +I
Sbjct: 72  NNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAFTEFLGLII 115

[Close]
BLAST of Csa6G404130 vs. TAIR10
Match: AT1G69850.1 (AT1G69850.1 nitrate transporter 1:2)

HSP 1 Score: 160.2 bits (404), Expect = 7.6e-40
Identity = 78/110 (70.91%), Postives = 89/110 (80.91%), Query Frame = 1 

Query: 7   ESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMGF 66
           E + S WEGY DWR R A KGRHGGM+AA FVL VE+LENLA+LANASNLV+YLR+YM  
Sbjct: 4   EEEVSRWEGYADWRNRAAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREYMHM 63

Query: 67  SPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           SP+KSAN VT FMGTAFLLALLGGFLSDA F+T+ +F+ S+ IEFL  +I
Sbjct: 64  SPSKSANDVTNFMGTAFLLALLGGFLSDAFFSTFQIFLISASIEFLGLII 113

[Close]
BLAST of Csa6G404130 vs. TAIR10
Match: AT5G62730.1 (AT5G62730.1 Major facilitator superfamily protein)

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-38
Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 1 

Query: 2   EAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLR 61
           E + E +  S W GYVDWR RPA +GRHGGM+AA FVL VEVLENLAFLANASNLV+YL 
Sbjct: 30  EQMDEANRLSAWNGYVDWRSRPALRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLS 89

Query: 62  KYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
             MGFSP+ +AN VT FMGTAF LALLGGFL+DA FTT+++++ S+ IEFL
Sbjct: 90  TKMGFSPSGAANAVTAFMGTAFFLALLGGFLADAFFTTFHIYLVSAAIEFL 140

[Close]
BLAST of Csa6G404130 vs. TAIR10
Match: AT1G27040.1 (AT1G27040.1 Major facilitator superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-36
Identity = 71/109 (65.14%), Postives = 86/109 (78.90%), Query Frame = 1 

Query: 4   VKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKY 63
           V+   D S WEGY DWR + A +GRHGGM+AA FVL VE+LENLAFLANASNLV+YL+ +
Sbjct: 3   VEMHGDVSKWEGYADWRNKAALRGRHGGMLAASFVLAVEILENLAFLANASNLVLYLKNF 62

Query: 64  MGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
           M  S A+S++ VTTFM TAFLLALLGGFL+DA F+T+ +F+ S+ IEFL
Sbjct: 63  MHMSLARSSSEVTTFMATAFLLALLGGFLADAFFSTFVIFLISASIEFL 111

[Close]
BLAST of Csa6G404130 vs. TAIR10
Match: AT1G59740.1 (AT1G59740.1 Major facilitator superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 4.3e-19
Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 1 

Query: 5   KEESDGSIWE----GYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 64
           +E S+ + WE      VDWR RP+   +HGGM AA FVLG++  E +   A  +NL+ Y+
Sbjct: 14  EEVSNENNWELAEEESVDWRGRPSNPNKHGGMRAALFVLGLQAFEIMGIAAVGNNLITYV 73

Query: 65  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIE 111
              M F  +K+AN VT F+GT F+ ALLGG+LSDA   +++  I   F+E
Sbjct: 74  INEMHFPLSKAANIVTNFVGTIFIFALLGGYLSDAFLGSFWTIIIFGFVE 123

[Close]
BLAST of Csa6G404130 vs. TAIR10
Match: AT3G25280.1 (AT3G25280.1 Major facilitator superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 4.3e-19
Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 1 

Query: 14  EGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMGFSPAKSAN 73
           E + DW+ + A  G+HGG+ AA  V  V ++EN+ F+AN  N V Y    M ++PA +AN
Sbjct: 7   EKFEDWKGKEAIPGKHGGIRAASIVCVVVMMENIVFIANGFNFVKYFMGSMHYTPATAAN 66

Query: 74  HVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
            VT FMGT+FLL L GGF++D+  T +  FI    IE +
Sbjct: 67  MVTNFMGTSFLLTLFGGFIADSFVTHFTTFIVFCCIELM 105

[Close]
BLAST of Csa6G404130 vs. NCBI nr
Match: gi|700192594|gb|KGN47798.1| (hypothetical protein Csa_6G404130 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 3.4e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60
           MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 116

[Close]
BLAST of Csa6G404130 vs. NCBI nr
Match: gi|778715931|ref|XP_011657481.1| (PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60
           MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
           RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 112

[Close]
BLAST of Csa6G404130 vs. NCBI nr
Match: gi|659113213|ref|XP_008456458.1| (PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-54
Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60
           MEAVKEESDGSIWEGYVDWRKRPA KGRHGGM+AAGFVLGVEVLENLAFLANASNLVMYL
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAVKGRHGGMLAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
           RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDA FTTYYVF+FSSF+EFL
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAFFTTYYVFLFSSFLEFL 112

[Close]
BLAST of Csa6G404130 vs. NCBI nr
Match: gi|922335654|ref|XP_013445817.1| (peptide/nitrate transporter plant [Medicago truncatula])

HSP 1 Score: 171.4 bits (433), Expect = 9.3e-40
Identity = 82/107 (76.64%), Postives = 94/107 (87.85%), Query Frame = 1 

Query: 6   EESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKYMG 65
           E+  G+ W GYVDWR RPA +GRHGGM+AA FVL VEVLENLAFLANASNLV+YLRKYM 
Sbjct: 4   EQQQGTRWIGYVDWRNRPAHRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLRKYMH 63

Query: 66  FSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 113
           FSP+KSAN+VT FMGTAFLLALLGGFLSDA FTTY++++ S+ IEFL
Sbjct: 64  FSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAVIEFL 110

[Close]
BLAST of Csa6G404130 vs. NCBI nr
Match: gi|674248639|gb|KFK41404.1| (hypothetical protein AALP_AA2G126500 [Arabis alpina])

HSP 1 Score: 168.7 bits (426), Expect = 6.0e-39
Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 1 

Query: 4   VKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYLRKY 63
           V+EE  G +WEGY DWR R A KGRHGGM+AA FVL VE+LENLA+LANASNLV+YLR+Y
Sbjct: 3   VEEEQHGDVWEGYADWRNRTAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREY 62

Query: 64  MGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVRLI 117
           M  SP+KSAN VT FMGTAFLLALLGGFLSDA F+TY +F+ S+ IEFL  +I
Sbjct: 63  MHLSPSKSANDVTNFMGTAFLLALLGGFLSDAFFSTYIIFLISASIEFLGLII 115

The following BLAST results are available for this feature:
BLAST of Csa6G404130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTR19_ARATH1.3e-3870.91Protein NRT1/ PTR FAMILY 4.6 OS=Arabidopsis thaliana GN=NPF4.6 PE=1 SV=1[more]
PTR54_ARATH2.5e-3768.47Protein NRT1/ PTR FAMILY 4.7 OS=Arabidopsis thaliana GN=NPF4.7 PE=2 SV=2[more]
PTR12_ARATH3.1e-3565.14Protein NRT1/ PTR FAMILY 4.5 OS=Arabidopsis thaliana GN=NPF4.5 PE=2 SV=1[more]
PTR16_ARATH7.7e-1843.64Protein NRT1/ PTR FAMILY 4.3 OS=Arabidopsis thaliana GN=NPF4.3 PE=2 SV=1[more]
PTR34_ARATH7.7e-1843.43Protein NRT1/ PTR FAMILY 4.1 OS=Arabidopsis thaliana GN=NPF4.1 PE=2 SV=1[more]
BLAST of Csa6G404130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE15_CUCSA2.4e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404130 PE=4 SV=1[more]
A0A072TSL8_MEDTR6.5e-4076.64Peptide/nitrate transporter plant OS=Medicago truncatula GN=MTR_8g469310 PE=4 SV... [more]
A0A087HH02_ARAAL4.2e-3971.68Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G126500 PE=4 SV=1[more]
A0A0B0MSN6_GOSAR2.1e-3876.92Nitrate transporter 1.2-like protein OS=Gossypium arboreum GN=F383_25809 PE=4 SV... [more]
A0A0D2T2L6_GOSRA7.9e-3875.96Uncharacterized protein OS=Gossypium raimondii GN=B456_008G183100 PE=4 SV=1[more]
BLAST of Csa6G404130 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69850.17.6e-4070.91 nitrate transporter 1:2[more]
AT5G62730.11.4e-3868.47 Major facilitator superfamily protein[more]
AT1G27040.11.7e-3665.14 Major facilitator superfamily protein[more]
AT1G59740.14.3e-1943.64 Major facilitator superfamily protein[more]
AT3G25280.14.3e-1944.44 Major facilitator superfamily protein[more]
BLAST of Csa6G404130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192594|gb|KGN47798.1|3.4e-58100.00hypothetical protein Csa_6G404130 [Cucumis sativus][more]
gi|778715931|ref|XP_011657481.1|3.2e-56100.00PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis sativus][more]
gi|659113213|ref|XP_008456458.1|1.3e-5495.54PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis melo][more]
gi|922335654|ref|XP_013445817.1|9.3e-4076.64peptide/nitrate transporter plant [Medicago truncatula][more]
gi|674248639|gb|KFK41404.1|6.0e-3971.68hypothetical protein AALP_AA2G126500 [Arabis alpina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU085817cucumber EST collection version 3.0transcribed_cluster
CU156197cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G404130.1Csa6G404130.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU085817CU085817transcribed_cluster
CU156197CU156197transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000109Proton-dependent oligopeptide transporter familyPANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 5..112
score: 4.2
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 38..112
score: 4.
NoneNo IPR availablePANTHERPTHR11654:SF98PROTEIN NRT1/ PTR FAMILY 4.5-RELATEDcoord: 5..112
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G404130MELO3C019773Melon (DHL92) v3.5.1cumeB475
Csa6G404130Cp4.1LG11g07620Cucurbita pepo (Zucchini)cpecuB121
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G404130Watermelon (97103) v1cuwmB469
Csa6G404130Cucurbita pepo (Zucchini)cpecuB838
Csa6G404130Cucurbita pepo (Zucchini)cpecuB844
Csa6G404130Bottle gourd (USVL1VR-Ls)culsiB479
Csa6G404130Cucumber (Gy14) v2cgybcuB281
Csa6G404130Melon (DHL92) v3.6.1cumedB457
Csa6G404130Silver-seed gourdcarcuB0147
Csa6G404130Silver-seed gourdcarcuB0235
Csa6G404130Watermelon (97103) v2cuwmbB499
Csa6G404130Wax gourdcuwgoB582
Csa6G404130Cucumber (Gy14) v1cgycuB051
Csa6G404130Cucurbita maxima (Rimu)cmacuB193
Csa6G404130Cucurbita maxima (Rimu)cmacuB198
Csa6G404130Cucurbita maxima (Rimu)cmacuB807
Csa6G404130Cucurbita moschata (Rifu)cmocuB178
Csa6G404130Cucurbita moschata (Rifu)cmocuB182
Csa6G404130Cucurbita moschata (Rifu)cmocuB798
Csa6G404130Watermelon (Charleston Gray)cuwcgB508