Cp4.1LG11g07620 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07620
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionnitrate transporter 1:2
LocationCp4.1LG11 : 6076585 .. 6077094 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGTTTCTCCAATTTTCCTTCTTGTCAACCTTTGATCGTTCTATAATGTTTCTTGGATTGTTTGTTAATAGGAAGTTGTTAAGGAGGAGGGCGACCCCGGCGTATGGGAAGGCTACGTCGACTGGCGGAGGAGGCCGGCCGTGAGAGGGCGGCACGGCGGCATGAGGGCAGCTGGGTTTGTGTTAGGTTAGTGAACTCTTCCAATCTCCTTTTTGTTTTTGTAGTACATGTCAATTAACACTGAGTTATATTAGGAGTGGAAGTACTCGAGAATTTAGCGTTTTTGGCTAATGCAAGCAACTTAGTGATGTTTTTGAGGAAGTACATGCAATTTTCACCGACGAAATCCGCTAACCATGTCACCAATTTCATGGGCACTGCCTTCCTTCTCGCCCTTCTTGGTGGCTTCCTCTCCGATGCCTTTTTCACCACTTATTACGTCTTCCTATTCTCCTCTCTTCTCGAGTTTCTGGTTCGTACTCGTACTCTCCTCTCAATATACTAA

mRNA sequence

ATGGTGGTTGTTAAGGAGGAGGGCGACCCCGGCGTATGGGAAGGCTACGTCGACTGGCGGAGGAGGCCGGCCGTGAGAGGGCGGCACGGCGGCATGAGGGCAGCTGGGTTTGTGTTAGGAGTGGAAGTACTCGAGAATTTAGCGTTTTTGGCTAATGCAAGCAACTTAGTGATGTTTTTGAGGAAGTACATGCAATTTTCACCGACGAAATCCGCTAACCATGTCACCAATTTCATGGGCACTGCCTTCCTTCTCGCCCTTCTTGGTGGCTTCCTCTCCGATGCCTTTTTCACCACTTATTACGTCTTCCTATTCTCCTCTCTTCTCGAGTTTCTGGTTCGTACTCGTACTCTCCTCTCAATATACTAA

Coding sequence (CDS)

ATGGTGGTTGTTAAGGAGGAGGGCGACCCCGGCGTATGGGAAGGCTACGTCGACTGGCGGAGGAGGCCGGCCGTGAGAGGGCGGCACGGCGGCATGAGGGCAGCTGGGTTTGTGTTAGGAGTGGAAGTACTCGAGAATTTAGCGTTTTTGGCTAATGCAAGCAACTTAGTGATGTTTTTGAGGAAGTACATGCAATTTTCACCGACGAAATCCGCTAACCATGTCACCAATTTCATGGGCACTGCCTTCCTTCTCGCCCTTCTTGGTGGCTTCCTCTCCGATGCCTTTTTCACCACTTATTACGTCTTCCTATTCTCCTCTCTTCTCGAGTTTCTGGTTCGTACTCGTACTCTCCTCTCAATATACTAA

Protein sequence

MVVVKEEGDPGVWEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSANHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFLVRTRTLLSIY
Homology
[Close]
BLAST of Cp4.1LG11g07620 vs. Swiss-Prot
Match: PTR19_ARATH (Protein NRT1/ PTR FAMILY 4.6 OS=Arabidopsis thaliana GN=NPF4.6 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-36
Identity = 76/100 (76.00%), Postives = 88/100 (88.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           WEGY DWR R AV+GRHGGM AA FVL VE+LENLA+LANASNLV++LR+YM  SP+KSA
Sbjct: 10  WEGYADWRNRAAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREYMHMSPSKSA 69

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N VTNFMGTAFLLALLGGFLSDAFF+T+ +FL S+ +EFL
Sbjct: 70  NDVTNFMGTAFLLALLGGFLSDAFFSTFQIFLISASIEFL 109

[Close]
BLAST of Cp4.1LG11g07620 vs. Swiss-Prot
Match: PTR54_ARATH (Protein NRT1/ PTR FAMILY 4.7 OS=Arabidopsis thaliana GN=NPF4.7 PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 8.0e-34
Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           W GYVDWR RPA+RGRHGGM AA FVL VEVLENLAFLANASNLV++L   M FSP+ +A
Sbjct: 41  WNGYVDWRSRPALRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLSTKMGFSPSGAA 100

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N VT FMGTAF LALLGGFL+DAFFTT++++L S+ +EFL
Sbjct: 101 NAVTAFMGTAFFLALLGGFLADAFFTTFHIYLVSAAIEFL 140

[Close]
BLAST of Cp4.1LG11g07620 vs. Swiss-Prot
Match: PTR12_ARATH (Protein NRT1/ PTR FAMILY 4.5 OS=Arabidopsis thaliana GN=NPF4.5 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-33
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 1 

Query: 4   VKEEGDPGVWEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKY 63
           V+  GD   WEGY DWR + A+RGRHGGM AA FVL VE+LENLAFLANASNLV++L+ +
Sbjct: 3   VEMHGDVSKWEGYADWRNKAALRGRHGGMLAASFVLAVEILENLAFLANASNLVLYLKNF 62

Query: 64  MQFSPTKSANHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           M  S  +S++ VT FM TAFLLALLGGFL+DAFF+T+ +FL S+ +EFL
Sbjct: 63  MHMSLARSSSEVTTFMATAFLLALLGGFLADAFFSTFVIFLISASIEFL 111

[Close]
BLAST of Cp4.1LG11g07620 vs. Swiss-Prot
Match: PTR35_ARATH (Protein NRT1/ PTR FAMILY 4.2 OS=Arabidopsis thaliana GN=NPF4.2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.1e-18
Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 14  EGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSAN 73
           E + DW+ + A+ G+HGG+RAA  V  V ++EN+ F+AN  N V +    M ++P  +AN
Sbjct: 7   EKFEDWKGKEAIPGKHGGIRAASIVCVVVMMENIVFIANGFNFVKYFMGSMHYTPATAAN 66

Query: 74  HVTNFMGTAFLLALLGGFLSDAF---FTTYYVFLFSSLLEFLVRT 116
            VTNFMGT+FLL L GGF++D+F   FTT+ VF    L+  ++ T
Sbjct: 67  MVTNFMGTSFLLTLFGGFIADSFVTHFTTFIVFCCIELMGLILLT 111

[Close]
BLAST of Cp4.1LG11g07620 vs. Swiss-Prot
Match: PTR34_ARATH (Protein NRT1/ PTR FAMILY 4.1 OS=Arabidopsis thaliana GN=NPF4.1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-17
Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = 1 

Query: 14  EGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSAN 73
           E + DWR + A+ G+HGG++AA     VE +EN+ FLA ++N +M+  K M +S  K+A 
Sbjct: 7   EKFEDWRGKEAISGKHGGIKAAFIACVVETMENMVFLACSTNFMMYFTKSMNYSTPKAAT 66

Query: 74  HVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
            VTNF+GT+FLL + GGF++D+F T +  F+    +E L
Sbjct: 67  MVTNFVGTSFLLTIFGGFVADSFLTRFAAFVLFGSIELL 105

[Close]
BLAST of Cp4.1LG11g07620 vs. TrEMBL
Match: A0A0A0KE15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404130 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-46
Identity = 96/114 (84.21%), Postives = 102/114 (89.47%), Query Frame = 1 

Query: 1   MVVVKEEGDPGVWEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFL 60
           M  VKEE D  +WEGYVDWR+RPA +GRHGGM AAGFVLGVEVLENLAFLANASNLVM+L
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMQFSPTKSANHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFLVR 115
           RKYM FSP KSANHVT FMGTAFLLALLGGFLSDA FTTYYVF+FSS +EFLVR
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVR 114

[Close]
BLAST of Cp4.1LG11g07620 vs. TrEMBL
Match: A0A072TSL8_MEDTR (Peptide/nitrate transporter plant OS=Medicago truncatula GN=MTR_8g469310 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.3e-38
Identity = 82/100 (82.00%), Postives = 92/100 (92.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           W GYVDWR RPA RGRHGGM AA FVL VEVLENLAFLANASNLV++LRKYM FSP+KSA
Sbjct: 11  WIGYVDWRNRPAHRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLRKYMHFSPSKSA 70

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N+VTNFMGTAFLLALLGGFLSDAFFTTY+++L S+++EFL
Sbjct: 71  NNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAVIEFL 110

[Close]
BLAST of Cp4.1LG11g07620 vs. TrEMBL
Match: F6HPF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01570 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.1e-37
Identity = 79/100 (79.00%), Postives = 91/100 (91.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           WEGYVDWR RPA+RGRHGGM AA FVLGVE+LENLAFL+NASNLV +L  YM FSP+KSA
Sbjct: 10  WEGYVDWRGRPALRGRHGGMLAASFVLGVEILENLAFLSNASNLVRYLSDYMHFSPSKSA 69

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N+VTNFMGTAFLLALLGGFLSDAFFT Y+++L S+++EFL
Sbjct: 70  NNVTNFMGTAFLLALLGGFLSDAFFTPYHIYLISAVIEFL 109

[Close]
BLAST of Cp4.1LG11g07620 vs. TrEMBL
Match: A0A0B2Q101_GLYSO (Nitrate transporter 1.2 OS=Glycine soja GN=glysoja_029583 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.4e-37
Identity = 78/100 (78.00%), Postives = 93/100 (93.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           WEGYV+WR +PA+RGRHGGM AA FVL VE+LENLAFLANASNLV++LR+YM  SP+KSA
Sbjct: 10  WEGYVNWRNKPALRGRHGGMLAASFVLVVEILENLAFLANASNLVLYLRQYMHMSPSKSA 69

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N+VTNFMGTAFLLALLGGFLSDAFFTTY+++L S+++EFL
Sbjct: 70  NNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAVIEFL 109

[Close]
BLAST of Cp4.1LG11g07620 vs. TrEMBL
Match: K4BWM6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.4e-37
Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           W+ YVDW+ RPA+  RHGG+ AA FVLGVEVLENLAFLANASNLV+++ +YM FSPTKSA
Sbjct: 9   WDSYVDWKNRPAINNRHGGLLAASFVLGVEVLENLAFLANASNLVLYMSEYMHFSPTKSA 68

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N VTNFMGTAFLLALLGGFLSDAFFTTYY++L S+L EFL
Sbjct: 69  NSVTNFMGTAFLLALLGGFLSDAFFTTYYIYLISALFEFL 108

[Close]
BLAST of Cp4.1LG11g07620 vs. TAIR10
Match: AT1G69850.1 (AT1G69850.1 nitrate transporter 1:2)

HSP 1 Score: 154.1 bits (388), Expect = 5.7e-38
Identity = 76/100 (76.00%), Postives = 88/100 (88.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           WEGY DWR R AV+GRHGGM AA FVL VE+LENLA+LANASNLV++LR+YM  SP+KSA
Sbjct: 10  WEGYADWRNRAAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREYMHMSPSKSA 69

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N VTNFMGTAFLLALLGGFLSDAFF+T+ +FL S+ +EFL
Sbjct: 70  NDVTNFMGTAFLLALLGGFLSDAFFSTFQIFLISASIEFL 109

[Close]
BLAST of Cp4.1LG11g07620 vs. TAIR10
Match: AT5G62730.1 (AT5G62730.1 Major facilitator superfamily protein)

HSP 1 Score: 144.4 bits (363), Expect = 4.5e-35
Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           W GYVDWR RPA+RGRHGGM AA FVL VEVLENLAFLANASNLV++L   M FSP+ +A
Sbjct: 41  WNGYVDWRSRPALRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLSTKMGFSPSGAA 100

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N VT FMGTAF LALLGGFL+DAFFTT++++L S+ +EFL
Sbjct: 101 NAVTAFMGTAFFLALLGGFLADAFFTTFHIYLVSAAIEFL 140

[Close]
BLAST of Cp4.1LG11g07620 vs. TAIR10
Match: AT1G27040.1 (AT1G27040.1 Major facilitator superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-34
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 1 

Query: 4   VKEEGDPGVWEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKY 63
           V+  GD   WEGY DWR + A+RGRHGGM AA FVL VE+LENLAFLANASNLV++L+ +
Sbjct: 3   VEMHGDVSKWEGYADWRNKAALRGRHGGMLAASFVLAVEILENLAFLANASNLVLYLKNF 62

Query: 64  MQFSPTKSANHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           M  S  +S++ VT FM TAFLLALLGGFL+DAFF+T+ +FL S+ +EFL
Sbjct: 63  MHMSLARSSSEVTTFMATAFLLALLGGFLADAFFSTFVIFLISASIEFL 111

[Close]
BLAST of Cp4.1LG11g07620 vs. TAIR10
Match: AT3G25280.1 (AT3G25280.1 Major facilitator superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-19
Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 14  EGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSAN 73
           E + DW+ + A+ G+HGG+RAA  V  V ++EN+ F+AN  N V +    M ++P  +AN
Sbjct: 7   EKFEDWKGKEAIPGKHGGIRAASIVCVVVMMENIVFIANGFNFVKYFMGSMHYTPATAAN 66

Query: 74  HVTNFMGTAFLLALLGGFLSDAF---FTTYYVFLFSSLLEFLVRT 116
            VTNFMGT+FLL L GGF++D+F   FTT+ VF    L+  ++ T
Sbjct: 67  MVTNFMGTSFLLTLFGGFIADSFVTHFTTFIVFCCIELMGLILLT 111

[Close]
BLAST of Cp4.1LG11g07620 vs. TAIR10
Match: AT3G25260.1 (AT3G25260.1 Major facilitator superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 1.7e-18
Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = 1 

Query: 14  EGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSAN 73
           E + DWR + A+ G+HGG++AA     VE +EN+ FLA ++N +M+  K M +S  K+A 
Sbjct: 7   EKFEDWRGKEAISGKHGGIKAAFIACVVETMENMVFLACSTNFMMYFTKSMNYSTPKAAT 66

Query: 74  HVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
            VTNF+GT+FLL + GGF++D+F T +  F+    +E L
Sbjct: 67  MVTNFVGTSFLLTIFGGFVADSFLTRFAAFVLFGSIELL 105

[Close]
BLAST of Cp4.1LG11g07620 vs. NCBI nr
Match: gi|659113213|ref|XP_008456458.1| (PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 6.3e-47
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 1 

Query: 1   MVVVKEEGDPGVWEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFL 60
           M  VKEE D  +WEGYVDWR+RPAV+GRHGGM AAGFVLGVEVLENLAFLANASNLVM+L
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAVKGRHGGMLAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMQFSPTKSANHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           RKYM FSP KSANHVT FMGTAFLLALLGGFLSDAFFTTYYVFLFSS LEFL
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAFFTTYYVFLFSSFLEFL 112

[Close]
BLAST of Cp4.1LG11g07620 vs. NCBI nr
Match: gi|700192594|gb|KGN47798.1| (hypothetical protein Csa_6G404130 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 3.1e-46
Identity = 96/114 (84.21%), Postives = 102/114 (89.47%), Query Frame = 1 

Query: 1   MVVVKEEGDPGVWEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFL 60
           M  VKEE D  +WEGYVDWR+RPA +GRHGGM AAGFVLGVEVLENLAFLANASNLVM+L
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMQFSPTKSANHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFLVR 115
           RKYM FSP KSANHVT FMGTAFLLALLGGFLSDA FTTYYVF+FSS +EFLVR
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFLVR 114

[Close]
BLAST of Cp4.1LG11g07620 vs. NCBI nr
Match: gi|778715931|ref|XP_011657481.1| (PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 94/112 (83.93%), Postives = 100/112 (89.29%), Query Frame = 1 

Query: 1   MVVVKEEGDPGVWEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFL 60
           M  VKEE D  +WEGYVDWR+RPA +GRHGGM AAGFVLGVEVLENLAFLANASNLVM+L
Sbjct: 1   MEAVKEESDGSIWEGYVDWRKRPAAKGRHGGMIAAGFVLGVEVLENLAFLANASNLVMYL 60

Query: 61  RKYMQFSPTKSANHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           RKYM FSP KSANHVT FMGTAFLLALLGGFLSDA FTTYYVF+FSS +EFL
Sbjct: 61  RKYMGFSPAKSANHVTTFMGTAFLLALLGGFLSDAIFTTYYVFIFSSFIEFL 112

[Close]
BLAST of Cp4.1LG11g07620 vs. NCBI nr
Match: gi|922335654|ref|XP_013445817.1| (peptide/nitrate transporter plant [Medicago truncatula])

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-37
Identity = 82/100 (82.00%), Postives = 92/100 (92.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           W GYVDWR RPA RGRHGGM AA FVL VEVLENLAFLANASNLV++LRKYM FSP+KSA
Sbjct: 11  WIGYVDWRNRPAHRGRHGGMLAASFVLVVEVLENLAFLANASNLVLYLRKYMHFSPSKSA 70

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N+VTNFMGTAFLLALLGGFLSDAFFTTY+++L S+++EFL
Sbjct: 71  NNVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAVIEFL 110

[Close]
BLAST of Cp4.1LG11g07620 vs. NCBI nr
Match: gi|296086434|emb|CBI32023.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 162.2 bits (409), Expect = 5.9e-37
Identity = 79/100 (79.00%), Postives = 91/100 (91.00%), Query Frame = 1 

Query: 13  WEGYVDWRRRPAVRGRHGGMRAAGFVLGVEVLENLAFLANASNLVMFLRKYMQFSPTKSA 72
           WEGYVDWR RPA+RGRHGGM AA FVLGVE+LENLAFL+NASNLV +L  YM FSP+KSA
Sbjct: 218 WEGYVDWRGRPALRGRHGGMLAASFVLGVEILENLAFLSNASNLVRYLSDYMHFSPSKSA 277

Query: 73  NHVTNFMGTAFLLALLGGFLSDAFFTTYYVFLFSSLLEFL 113
           N+VTNFMGTAFLLALLGGFLSDAFFT Y+++L S+++EFL
Sbjct: 278 NNVTNFMGTAFLLALLGGFLSDAFFTPYHIYLISAVIEFL 317

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTR19_ARATH1.0e-3676.00Protein NRT1/ PTR FAMILY 4.6 OS=Arabidopsis thaliana GN=NPF4.6 PE=1 SV=1[more]
PTR54_ARATH8.0e-3473.00Protein NRT1/ PTR FAMILY 4.7 OS=Arabidopsis thaliana GN=NPF4.7 PE=2 SV=2[more]
PTR12_ARATH2.3e-3364.22Protein NRT1/ PTR FAMILY 4.5 OS=Arabidopsis thaliana GN=NPF4.5 PE=2 SV=1[more]
PTR35_ARATH6.1e-1844.76Protein NRT1/ PTR FAMILY 4.2 OS=Arabidopsis thaliana GN=NPF4.2 PE=2 SV=1[more]
PTR34_ARATH3.0e-1743.43Protein NRT1/ PTR FAMILY 4.1 OS=Arabidopsis thaliana GN=NPF4.1 PE=2 SV=1[more]
BLAST of Cp4.1LG11g07620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE15_CUCSA2.2e-4684.21Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404130 PE=4 SV=1[more]
A0A072TSL8_MEDTR8.3e-3882.00Peptide/nitrate transporter plant OS=Medicago truncatula GN=MTR_8g469310 PE=4 SV... [more]
F6HPF6_VITVI4.1e-3779.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01570 PE=4 SV=... [more]
A0A0B2Q101_GLYSO5.4e-3778.00Nitrate transporter 1.2 OS=Glycine soja GN=glysoja_029583 PE=4 SV=1[more]
K4BWM6_SOLLC5.4e-3778.00Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cp4.1LG11g07620 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69850.15.7e-3876.00 nitrate transporter 1:2[more]
AT5G62730.14.5e-3573.00 Major facilitator superfamily protein[more]
AT1G27040.11.3e-3464.22 Major facilitator superfamily protein[more]
AT3G25280.13.5e-1944.76 Major facilitator superfamily protein[more]
AT3G25260.11.7e-1843.43 Major facilitator superfamily protein[more]
BLAST of Cp4.1LG11g07620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113213|ref|XP_008456458.1|6.3e-4787.50PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis melo][more]
gi|700192594|gb|KGN47798.1|3.1e-4684.21hypothetical protein Csa_6G404130 [Cucumis sativus][more]
gi|778715931|ref|XP_011657481.1|3.5e-4583.93PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Cucumis sativus][more]
gi|922335654|ref|XP_013445817.1|1.2e-3782.00peptide/nitrate transporter plant [Medicago truncatula][more]
gi|296086434|emb|CBI32023.3|5.9e-3779.00unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005215 transporter activity
molecular_function GO:0022857 transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07620.1Cp4.1LG11g07620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000109Proton-dependent oligopeptide transporter familyPANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 1..112
score: 2.2
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 33..111
score: 2.
NoneNo IPR availablePANTHERPTHR11654:SF98PROTEIN NRT1/ PTR FAMILY 4.5-RELATEDcoord: 1..112
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g07620Csa6G404130Cucumber (Chinese Long) v2cpecuB121
Cp4.1LG11g07620MELO3C019773Melon (DHL92) v3.5.1cpemeB090
Cp4.1LG11g07620MELO3C019772.2Melon (DHL92) v3.6.1cpemedB113
Cp4.1LG11g07620CsaV3_6G036160Cucumber (Chinese Long) v3cpecucB0135
Cp4.1LG11g07620Bhi04G000983Wax gourdcpewgoB0140
Cp4.1LG11g07620CsGy6G020410Cucumber (Gy14) v2cgybcpeB717
Cp4.1LG11g07620Carg21911Silver-seed gourdcarcpeB0297
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g07620Cucurbita pepo (Zucchini)cpecpeB149
Cp4.1LG11g07620Cucumber (Gy14) v1cgycpeB0088
Cp4.1LG11g07620Cucurbita maxima (Rimu)cmacpeB181
Cp4.1LG11g07620Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g07620Cucurbita moschata (Rifu)cmocpeB155
Cp4.1LG11g07620Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g07620Wild cucumber (PI 183967)cpecpiB119
Cp4.1LG11g07620Bottle gourd (USVL1VR-Ls)cpelsiB099
Cp4.1LG11g07620Watermelon (Charleston Gray)cpewcgB123
Cp4.1LG11g07620Watermelon (97103) v1cpewmB100
Cp4.1LG11g07620Silver-seed gourdcarcpeB0191