Csa6G382920 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G382920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr6 : 17238909 .. 17239752 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTTGCATAGCATGAATGTTCTCTAAGATTTTGATCATTTTTAATGGAAGAGCAAGAGGATAATAAGCAGCAGCAGCAGCAGCAACCGCAGCTTCCCCAAAGGATTTCTCTTGCTTATGTTGAACAGGTGAACACAGATTTGATCATGGCCTTGGCAATGCAACAGCAGGAGCACGAGTTGGCCTATACGACGCTGGAGACCATTGCAAGTGATAGTGAAGAAGACGAAAATTCAGATTCCAACAGCAACAATGGTCTCGATACAAATGCTACCTCACAAAGGCAAGAACTTGTATCCCGGTGGGCTTTTTTGGAAGACGATGAGGAGACTACGGATGGAAATGATGATATGGAAGAAGATGAAGATGGGGATTTTGAGGGTTTTGATCTGGATGAGCTAACTTATGAGGAGTTGATTGCATTAGGGGAGTTCATTGGGGAAGAAAAGAGGGGCCTACCGATAAACGAAATACCTTCATGCTTGCACTCGAGCAAGTTCCAAACTATCGAAAACAGAAGTGGGATAGATCGGTGTGTGATTTGCCAAGTTGAATATGATGATGGTGAAGAATTGGCTGCTCTTCCTTGTGAGCATCCGTATCATTCAGAATGTATAGGCGAATGGCTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAATGGTTCTAAAAATGAATAATCTCCAAACAAATTGGTGGGCTAATTGCAAAATGGGGGAAAAGGTCAGATCAATGTTCGTAATTTGTTCATTTAATTGAAAGGAAATGTTAAGAACTTCACAAAAAAGATAGGAAGGCTTCTTTATATTTTTATTGTTTTTA

mRNA sequence

ATGGAAGAGCAAGAGGATAATAAGCAGCAGCAGCAGCAGCAACCGCAGCTTCCCCAAAGGATTTCTCTTGCTTATGTTGAACAGGTGAACACAGATTTGATCATGGCCTTGGCAATGCAACAGCAGGAGCACGAGTTGGCCTATACGACGCTGGAGACCATTGCAAGTGATAGTGAAGAAGACGAAAATTCAGATTCCAACAGCAACAATGGTCTCGATACAAATGCTACCTCACAAAGGCAAGAACTTGTATCCCGGTGGGCTTTTTTGGAAGACGATGAGGAGACTACGGATGGAAATGATGATATGGAAGAAGATGAAGATGGGGATTTTGAGGGTTTTGATCTGGATGAGCTAACTTATGAGGAGTTGATTGCATTAGGGGAGTTCATTGGGGAAGAAAAGAGGGGCCTACCGATAAACGAAATACCTTCATGCTTGCACTCGAGCAAGTTCCAAACTATCGAAAACAGAAGTGGGATAGATCGGTGTGTGATTTGCCAAGTTGAATATGATGATGGTGAAGAATTGGCTGCTCTTCCTTGTGAGCATCCGTATCATTCAGAATGTATAGGCGAATGGCTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAATGGTTCTAAAAATGAATAA

Coding sequence (CDS)

ATGGAAGAGCAAGAGGATAATAAGCAGCAGCAGCAGCAGCAACCGCAGCTTCCCCAAAGGATTTCTCTTGCTTATGTTGAACAGGTGAACACAGATTTGATCATGGCCTTGGCAATGCAACAGCAGGAGCACGAGTTGGCCTATACGACGCTGGAGACCATTGCAAGTGATAGTGAAGAAGACGAAAATTCAGATTCCAACAGCAACAATGGTCTCGATACAAATGCTACCTCACAAAGGCAAGAACTTGTATCCCGGTGGGCTTTTTTGGAAGACGATGAGGAGACTACGGATGGAAATGATGATATGGAAGAAGATGAAGATGGGGATTTTGAGGGTTTTGATCTGGATGAGCTAACTTATGAGGAGTTGATTGCATTAGGGGAGTTCATTGGGGAAGAAAAGAGGGGCCTACCGATAAACGAAATACCTTCATGCTTGCACTCGAGCAAGTTCCAAACTATCGAAAACAGAAGTGGGATAGATCGGTGTGTGATTTGCCAAGTTGAATATGATGATGGTGAAGAATTGGCTGCTCTTCCTTGTGAGCATCCGTATCATTCAGAATGTATAGGCGAATGGCTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAATGGTTCTAAAAATGAATAA

Protein sequence

MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEEDENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE*
Homology
[Close]
BLAST of Csa6G382920 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 63/169 (37.28%), Postives = 98/169 (57.99%), Query Frame = 1 

Query: 57  DSEEDENSDSNSNNGLDTNA------TSQRQELVSRWAFLED--DEETTDGNDDMEEDED 116
           D E+D NSD       D  A       ++ +++ +R + L    +    D  D+    +D
Sbjct: 174 DQEDDGNSDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQD 233

Query: 117 GDFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGI-DRCVIC 176
             ++  D DEL+YEEL+ALG+ +G E RGL  + I S L S +++  +N++G  + CVIC
Sbjct: 234 A-WDEMDPDELSYEELLALGDIVGTESRGLSADTIAS-LPSKRYKEGDNQNGTNESCVIC 293

Query: 177 QVEYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKN 217
           +++Y+D E+L  LPC+H YHSECI  WL+I +VCP+C  EVS+    ++
Sbjct: 294 RLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS 340

[Close]
BLAST of Csa6G382920 vs. Swiss-Prot
Match: BB_ARATH (E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21
Identity = 56/144 (38.89%), Postives = 80/144 (55.56%), Query Frame = 1 

Query: 75  NATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDF------EGFDLDELTYEELIALG 134
           N     +  V+R   + D +E ++  + +  + D D       +  D D +TYEEL+ LG
Sbjct: 100 NVADDPENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELG 159

Query: 135 EFIGEEKRGLP---INEIPSCLHSSKFQTIENRSGI-DRCVICQVEYDDGEELAALPCEH 194
           E +G E RGL    I  +P+  +  KF +I +R    +RCVICQ++Y  GE    LPC+H
Sbjct: 160 EAVGTESRGLSQELIETLPTKKY--KFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKH 219

Query: 195 PYHSECIGEWLQIKRVCPICGTEV 209
            YHSECI +WL I +VCP+C +EV
Sbjct: 220 VYHSECISKWLSINKVCPVCNSEV 241

[Close]
BLAST of Csa6G382920 vs. Swiss-Prot
Match: MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1 

Query: 115 DLDELTYEELIALGEFIGEEKRGLPINEIPSCLH-----SSKFQTIENRSGIDRCVICQV 174
           D+D ++YEEL+ALGE IG+   GL    I   +      SS   ++E    I+ C ICQ 
Sbjct: 602 DVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQE 661

Query: 175 EYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGTE 208
           EY +G+ L  L C H +H +CI +W+ IK +CPIC TE
Sbjct: 662 EYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]
BLAST of Csa6G382920 vs. Swiss-Prot
Match: HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP1 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1 

Query: 115 DLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDR--CVICQVEYD 174
           D+D ++YEEL+AL E IG    GL   E+   L   KF +    + ++   C ICQ EY 
Sbjct: 569 DIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEYV 628

Query: 175 DGEELAALPCEHPYHSECIGEWLQIKRVCPIC 205
           DG++L  L C H +H  C+ +WL +K  CPIC
Sbjct: 629 DGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]
BLAST of Csa6G382920 vs. Swiss-Prot
Match: RHG1A_ARATH (Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana GN=RHG1A PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-15
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 115 DLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQT-IENRSGIDRCVICQVEYDD 174
           D+D ++YEEL+AL E IG+   G+    I + L   K+++  ++    + C +CQ EY +
Sbjct: 587 DVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEYTE 646

Query: 175 GEELAALPCEHPYHSECIGEWLQIKRVCPICGT 207
           GE++  L C H +HS+CI EWL+ K +CPIC T
Sbjct: 647 GEDMGTLECGHEFHSQCIKEWLKQKNLCPICKT 679

[Close]
BLAST of Csa6G382920 vs. TrEMBL
Match: A0A0A0KFS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382920 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.0e-122
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE 60
           MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE
Sbjct: 1   MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE 60

Query: 61  DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT 120
           DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT
Sbjct: 61  DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT 120

Query: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL 180
           YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL
Sbjct: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL 180

Query: 181 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 218
           PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 181 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 217

[Close]
BLAST of Csa6G382920 vs. TrEMBL
Match: M5XPQ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020151mg PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50
Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 1 

Query: 11  QQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDS---EEDENSDSN 70
           + Q  Q  +R     + QV++D I+A+AMQ+QE   AYT LETI SDS   EED+ S  N
Sbjct: 5   EDQSKQSTRRTPFTELNQVSSDFILAMAMQEQEQ--AYTMLETIESDSSDEEEDDASSPN 64

Query: 71  SNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELTYEELIAL 130
            N   D  A  + +E  + + FL +++  +  + +M+ED+      FD+DELTYEELIAL
Sbjct: 65  ENYDQDDTAFFESREFETEFGFLANEDSGSSSDQEMDEDD------FDVDELTYEELIAL 124

Query: 131 GEFIGEEKRGLPINEIPSCLH---SSKFQTIENRSGIDRCVICQVEYDDGEELAALPCEH 190
           GEFIGEEKRGLP NEI +CL    S    +I++++ IDRCVICQ+EY+DGE L AL C+H
Sbjct: 125 GEFIGEEKRGLPSNEISTCLQPYTSKSPSSIQSKTSIDRCVICQIEYEDGEALVALSCQH 184

Query: 191 PYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 218
           PYH +CI +WL+IK+ CPIC TEVSS + SK +
Sbjct: 185 PYHWDCISKWLEIKKSCPICSTEVSSTSSSKTK 209

[Close]
BLAST of Csa6G382920 vs. TrEMBL
Match: G7J4X5_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g088100 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-50
Identity = 105/216 (48.61%), Postives = 145/216 (67.13%), Query Frame = 1 

Query: 3   EQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHE-LAYTTLETIASDSEED 62
           E+E+ KQ  ++ P          +E+V++D ++A+ +Q+QE E   +T L TI S+S+ED
Sbjct: 2   EREEGKQSSEKNPYTE-------LEEVSSDFVLAIGLQEQELERTTFTNLATIESESDED 61

Query: 63  ENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDE-DGDFEGFDLDELT 122
            +  S SN+ +     S  QE  +   F+ED+    D +DD E+DE + + +  D DEL+
Sbjct: 62  ISDSSFSNDDIGDADFSFSQEFETDLQFVEDEGSNIDDDDDYEDDEMELEEDEVDPDELS 121

Query: 123 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL 182
           YEELI LG FIGEEKRGLP NEI SCLH    +  E+ SGIDRCVICQ+EY++GE L AL
Sbjct: 122 YEELIELGNFIGEEKRGLPANEISSCLHPYTSKIAESTSGIDRCVICQIEYEEGESLVAL 181

Query: 183 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKN 217
            C+HPYH++CI +WLQIK+VCPIC  EVS+ N +KN
Sbjct: 182 HCDHPYHTDCISKWLQIKKVCPICSNEVSTTNKAKN 210

[Close]
BLAST of Csa6G382920 vs. TrEMBL
Match: A0A067K9Q5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12129 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.4e-49
Identity = 109/222 (49.10%), Postives = 149/222 (67.12%), Query Frame = 1 

Query: 1   MEEQEDNKQQQ--QQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDS 60
           ME+ +++K+    +++ Q   R++   ++QV++D   A+A+Q+QE +  +  L  + SDS
Sbjct: 1   MEDNQESKRSMDDEERKQAASRVTFVGLDQVHSDFAFAMALQEQERD--FHVLANMESDS 60

Query: 61  EEDENSDSNSN----NGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGF 120
           EE+E+ +S S+    NG D     + QEL     FLE  +  +D  DDMEED+       
Sbjct: 61  EEEEDDESESSSEEYNGNDYEFF-ESQEL----EFLEGQDSNSD-EDDMEEDD------I 120

Query: 121 DLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDG 180
           D DEL+YEELIALGEFIGEEKRGL ++EI  CL   K + +EN+SGIDRCVICQVEY+  
Sbjct: 121 DPDELSYEELIALGEFIGEEKRGLSMDEISKCLKPFKHKCVENKSGIDRCVICQVEYEGD 180

Query: 181 EELAALPCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKN 217
           E L ALPC+HPYHSECI  WLQIK++CPIC +EVSSP   +N
Sbjct: 181 ESLVALPCDHPYHSECISNWLQIKKICPICNSEVSSPKIVRN 208

[Close]
BLAST of Csa6G382920 vs. TrEMBL
Match: B9S2X1_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0563340 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 107/214 (50.00%), Postives = 147/214 (68.69%), Query Frame = 1 

Query: 2   EEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEED 61
           +E++ +  + +++ Q  +R+ LA + QV +D  +A+A+Q QE   A+  L +I S+SEED
Sbjct: 5   QERKRSTDEDEERKQAARRVPLAELNQVRSDFAIAMALQNQES--AFNVLTSIESESEED 64

Query: 62  ----ENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLD 121
               E+  S  NNG++     + Q+L     FLE  +  +D  +DMEE+ED      D D
Sbjct: 65  NEESEDFSSEENNGINDYEFFESQDL----EFLEGQDSNSD--EDMEEEEDD----IDPD 124

Query: 122 ELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEEL 181
           EL+YEEL+ALGEFIGEEKRGL I EI  CL+ SK++++EN+S IDRCVICQVEY  GE L
Sbjct: 125 ELSYEELLALGEFIGEEKRGLSIEEISKCLNPSKYKSVENKSEIDRCVICQVEYQGGEPL 184

Query: 182 AA-LPCEHPYHSECIGEWLQIKRVCPICGTEVSS 211
            + LPC+HPYHSECI  WLQ+K++CPIC TEVSS
Sbjct: 185 VSLLPCQHPYHSECIINWLQVKKICPICTTEVSS 206

[Close]
BLAST of Csa6G382920 vs. TAIR10
Match: AT3G47180.1 (AT3G47180.1 RING/U-box superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 8.6e-37
Identity = 84/215 (39.07%), Postives = 129/215 (60.00%), Query Frame = 1 

Query: 6   DNKQQQQQQPQLPQRI-SLAYVEQVNTDLIMALAMQQQE-----HELAYTTLETIASDSE 65
           DN++++ +QP  P ++  LA  EQ N+++ +A +          H+ + + +  I SD E
Sbjct: 2   DNQEEEPKQP--PNKLPDLALFEQANSEVALAASQANSHFAHAMHDSSPSMISMIESDEE 61

Query: 66  EDENSDSNSN--NGLDTNATSQRQELVSRWAFLEDDEETT--DGNDDMEEDEDGDFEGFD 125
            ++  + N N     D+N     ++ ++   FLED E  +  +  DD  E+ED      D
Sbjct: 62  SEDEEEINENYYEYFDSNGFGVDEDEINE--FLEDQESNSNLEEEDDFLEEEDE----ID 121

Query: 126 LDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGE 185
            D+L+YEELIALG+FIG E RGL   EI +CL++S +    N++ IDRCV+CQ+E+++ E
Sbjct: 122 PDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFSHNKNEIDRCVVCQMEFEERE 181

Query: 186 ELAAL-PCEHPYHSECIGEWLQIKRVCPICGTEVS 210
            L  L PC+HPYHSECI +WL+ K++CPIC +E S
Sbjct: 182 SLVVLRPCDHPYHSECITKWLETKKICPICCSEPS 208

[Close]
BLAST of Csa6G382920 vs. TAIR10
Match: AT3G19910.1 (AT3G19910.1 RING/U-box superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 8.0e-27
Identity = 63/169 (37.28%), Postives = 98/169 (57.99%), Query Frame = 1 

Query: 57  DSEEDENSDSNSNNGLDTNA------TSQRQELVSRWAFLED--DEETTDGNDDMEEDED 116
           D E+D NSD       D  A       ++ +++ +R + L    +    D  D+    +D
Sbjct: 174 DQEDDGNSDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQD 233

Query: 117 GDFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGI-DRCVIC 176
             ++  D DEL+YEEL+ALG+ +G E RGL  + I S L S +++  +N++G  + CVIC
Sbjct: 234 A-WDEMDPDELSYEELLALGDIVGTESRGLSADTIAS-LPSKRYKEGDNQNGTNESCVIC 293

Query: 177 QVEYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKN 217
           +++Y+D E+L  LPC+H YHSECI  WL+I +VCP+C  EVS+    ++
Sbjct: 294 RLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS 340

[Close]
BLAST of Csa6G382920 vs. TAIR10
Match: AT3G63530.1 (AT3G63530.1 RING/U-box superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.7e-22
Identity = 56/144 (38.89%), Postives = 80/144 (55.56%), Query Frame = 1 

Query: 75  NATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDF------EGFDLDELTYEELIALG 134
           N     +  V+R   + D +E ++  + +  + D D       +  D D +TYEEL+ LG
Sbjct: 100 NVADDPENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELG 159

Query: 135 EFIGEEKRGLP---INEIPSCLHSSKFQTIENRSGI-DRCVICQVEYDDGEELAALPCEH 194
           E +G E RGL    I  +P+  +  KF +I +R    +RCVICQ++Y  GE    LPC+H
Sbjct: 160 EAVGTESRGLSQELIETLPTKKY--KFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKH 219

Query: 195 PYHSECIGEWLQIKRVCPICGTEV 209
            YHSECI +WL I +VCP+C +EV
Sbjct: 220 VYHSECISKWLSINKVCPVCNSEV 241

[Close]
BLAST of Csa6G382920 vs. TAIR10
Match: AT5G10650.1 (AT5G10650.1 RING/U-box superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-17
Identity = 53/171 (30.99%), Postives = 78/171 (45.61%), Query Frame = 1 

Query: 56  SDSEEDENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEG-- 115
           S +E D +S   + +GL     +   E++     +E DEE T   + +   E   F    
Sbjct: 349 SPTEADPSSSLVNRDGLSHYNMNGIAEVLLALERIEHDEELT--YEQLASIETNLFSSGM 408

Query: 116 -----------FDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGID 175
                       D+D ++YEEL+ALG+ +G     L    +   L  S +Q  +    I 
Sbjct: 409 FRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSIS 468

Query: 176 -------RCVICQVEYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGT 207
                  +C ICQ EY DG+EL  +PC+H YH  C+ +WL++K  CPIC T
Sbjct: 469 LYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKT 517

[Close]
BLAST of Csa6G382920 vs. TAIR10
Match: AT1G45180.1 (AT1G45180.1 RING/U-box superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 9.9e-17
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 1 

Query: 115 DLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSG-IDRCVICQVEYDD 174
           D+D +TYEEL++L E IG+   GL    I + L   K+++    S  ++ C +CQ EY +
Sbjct: 542 DVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKSSTRSSQEVEPCCVCQEEYKE 601

Query: 175 GEELAALPCEHPYHSECIGEWLQIKRVCPICGT 207
            EE+  L C H +HS+CI EWL+ K +CPIC T
Sbjct: 602 EEEIGRLECGHDFHSQCIKEWLKQKNLCPICKT 634

[Close]
BLAST of Csa6G382920 vs. NCBI nr
Match: gi|449464174|ref|XP_004149804.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 2.8e-122
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE 60
           MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE
Sbjct: 1   MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE 60

Query: 61  DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT 120
           DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT
Sbjct: 61  DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELT 120

Query: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL 180
           YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL
Sbjct: 121 YEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVICQVEYDDGEELAAL 180

Query: 181 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 218
           PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 181 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 217

[Close]
BLAST of Csa6G382920 vs. NCBI nr
Match: gi|659133455|ref|XP_008466738.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-105
Identity = 195/230 (84.78%), Postives = 208/230 (90.43%), Query Frame = 1 

Query: 1   MEEQEDNKQQQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEE 60
           MEEQEDN +QQQQQ  LPQRISLAYVEQVNTDLIMALAMQQQEHE+AYTTLETIAS+SEE
Sbjct: 1   MEEQEDNNKQQQQQ--LPQRISLAYVEQVNTDLIMALAMQQQEHEMAYTTLETIASESEE 60

Query: 61  DENSDSNSNNGLDTNATSQRQELVSRWAFLEDDEE---TTDG----------NDDMEEDE 120
           DE+SDSNSNNGL+TNA SQR+EL+ RWAF +++E      DG          N+DMEEDE
Sbjct: 61  DESSDSNSNNGLNTNAASQREELICRWAFPDENEYMEGNEDGDYEGSDMDELNEDMEEDE 120

Query: 121 DGDFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENRSGIDRCVIC 180
           DGDFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIEN+SGIDRCVIC
Sbjct: 121 DGDFEGFDLDELTYEELIALGEFIGEEKRGLPINEIPSCLHSSKFQTIENKSGIDRCVIC 180

Query: 181 QVEYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 218
           QVEYDDGEELAALPC+HPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE
Sbjct: 181 QVEYDDGEELAALPCQHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 228

[Close]
BLAST of Csa6G382920 vs. NCBI nr
Match: gi|645225500|ref|XP_008219608.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Prunus mume])

HSP 1 Score: 212.2 bits (539), Expect = 8.9e-52
Identity = 110/213 (51.64%), Postives = 145/213 (68.08%), Query Frame = 1 

Query: 11  QQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDS---EEDENSDSN 70
           + Q  Q  +R     + QV++D I+A+AMQ+QE   AYT LETI SDS   EED+ S SN
Sbjct: 5   EDQSKQSTRRTPFTELNQVSSDFILAMAMQEQEQ--AYTMLETIESDSSEEEEDDASSSN 64

Query: 71  SNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELTYEELIAL 130
            N   D  A  Q +E  + + FLE+++     + +M+ED+      FD+DELTYEELIAL
Sbjct: 65  ENYDQDDTAFFQSREFETEFGFLENEDRGNSSDQEMDEDD------FDVDELTYEELIAL 124

Query: 131 GEFIGEEKRGLPINEIPSCLH---SSKFQTIENRSGIDRCVICQVEYDDGEELAALPCEH 190
           GEFIGEEKRGLP NEI +CL    S    + ++++GIDRCVICQ+EY+DGE L AL C+H
Sbjct: 125 GEFIGEEKRGLPTNEISTCLQPYTSKSPSSNQSKTGIDRCVICQIEYEDGEALVALSCQH 184

Query: 191 PYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 218
           PYH +CI +WL+IK+ CPIC TEVSS + SK +
Sbjct: 185 PYHWDCISKWLEIKKSCPICSTEVSSTSSSKTK 209

[Close]
BLAST of Csa6G382920 vs. NCBI nr
Match: gi|658006970|ref|XP_008338661.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Malus domestica])

HSP 1 Score: 209.1 bits (531), Expect = 7.5e-51
Identity = 111/214 (51.87%), Postives = 144/214 (67.29%), Query Frame = 1 

Query: 10  QQQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDSEEDE------N 69
           ++++  Q  QR     + QV+ D I+A+AMQ+QE   AYT LETI SDSEED+      +
Sbjct: 4   EEERAKQSSQRTPFTELNQVSADFILAMAMQEQEQ--AYTMLETIESDSEEDDAEIDDAS 63

Query: 70  SDSNSNNGLDTNATSQRQEL-VSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELTYE 129
           S SN N   D  A SQ +E     + FLED+E  +  +   +++ D      D+DELTYE
Sbjct: 64  SSSNENYDPDNAAFSQSREFDAGDFRFLEDEEIGSSSSSSSDQEMDD----LDVDELTYE 123

Query: 130 ELIALGEFIGEEKRGLPINEIPSCLH--SSKFQTIENRSGIDRCVICQVEYDDGEELAAL 189
           EL+ALGEFIGEEKRGLP +EI +CLH  + K    ++ + IDRCV+CQ+EY+DGE LAAL
Sbjct: 124 ELLALGEFIGEEKRGLPSSEISTCLHPYTCKLAVDQSETSIDRCVVCQIEYEDGESLAAL 183

Query: 190 PCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGS 215
            CEHPYH ECI +WLQIK+ CPIC TEVSSP+ S
Sbjct: 184 SCEHPYHWECISQWLQIKKSCPICSTEVSSPSSS 211

[Close]
BLAST of Csa6G382920 vs. NCBI nr
Match: gi|596293656|ref|XP_007226705.1| (hypothetical protein PRUPE_ppa020151mg [Prunus persica])

HSP 1 Score: 207.2 bits (526), Expect = 2.9e-50
Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 1 

Query: 11  QQQQPQLPQRISLAYVEQVNTDLIMALAMQQQEHELAYTTLETIASDS---EEDENSDSN 70
           + Q  Q  +R     + QV++D I+A+AMQ+QE   AYT LETI SDS   EED+ S  N
Sbjct: 5   EDQSKQSTRRTPFTELNQVSSDFILAMAMQEQEQ--AYTMLETIESDSSDEEEDDASSPN 64

Query: 71  SNNGLDTNATSQRQELVSRWAFLEDDEETTDGNDDMEEDEDGDFEGFDLDELTYEELIAL 130
            N   D  A  + +E  + + FL +++  +  + +M+ED+      FD+DELTYEELIAL
Sbjct: 65  ENYDQDDTAFFESREFETEFGFLANEDSGSSSDQEMDEDD------FDVDELTYEELIAL 124

Query: 131 GEFIGEEKRGLPINEIPSCLH---SSKFQTIENRSGIDRCVICQVEYDDGEELAALPCEH 190
           GEFIGEEKRGLP NEI +CL    S    +I++++ IDRCVICQ+EY+DGE L AL C+H
Sbjct: 125 GEFIGEEKRGLPSNEISTCLQPYTSKSPSSIQSKTSIDRCVICQIEYEDGEALVALSCQH 184

Query: 191 PYHSECIGEWLQIKRVCPICGTEVSSPNGSKNE 218
           PYH +CI +WL+IK+ CPIC TEVSS + SK +
Sbjct: 185 PYHWDCISKWLEIKKSCPICSTEVSSTSSSKTK 209

The following BLAST results are available for this feature:
BLAST of Csa6G382920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BBR_ARATH1.4e-2537.28E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1[more]
BB_ARATH4.8e-2138.89E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1[more]
MBR1_ARATH1.2e-1642.86E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana GN=MBR1 PE=1 SV=1[more]
HIP1_ORYSJ1.7e-1541.30Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP... [more]
RHG1A_ARATH3.9e-1540.86Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana GN=RHG1A PE=2... [more]
BLAST of Csa6G382920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFS4_CUCSA2.0e-122100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382920 PE=4 SV=1[more]
M5XPQ1_PRUPE2.0e-5050.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020151mg PE=4 SV=1[more]
G7J4X5_MEDTR2.6e-5048.61Uncharacterized protein OS=Medicago truncatula GN=MTR_3g088100 PE=4 SV=1[more]
A0A067K9Q5_JATCU6.4e-4949.10Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12129 PE=4 SV=1[more]
B9S2X1_RICCO1.1e-4850.00Ring finger protein, putative OS=Ricinus communis GN=RCOM_0563340 PE=4 SV=1[more]
BLAST of Csa6G382920 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G47180.18.6e-3739.07 RING/U-box superfamily protein[more]
AT3G19910.18.0e-2737.28 RING/U-box superfamily protein[more]
AT3G63530.12.7e-2238.89 RING/U-box superfamily protein[more]
AT5G10650.11.5e-1730.99 RING/U-box superfamily protein[more]
AT1G45180.19.9e-1743.01 RING/U-box superfamily protein[more]
BLAST of Csa6G382920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464174|ref|XP_004149804.1|2.8e-122100.00PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis sativus][more]
gi|659133455|ref|XP_008466738.1|2.4e-10584.78PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo][more]
gi|645225500|ref|XP_008219608.1|8.9e-5251.64PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Prunus mume][more]
gi|658006970|ref|XP_008338661.1|7.5e-5151.87PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Malus domestica][more]
gi|596293656|ref|XP_007226705.1|2.9e-5050.23hypothetical protein PRUPE_ppa020151mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005839 proteasome core complex
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0061630 ubiquitin protein ligase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU129147cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G382920.1Csa6G382920.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU129147CU129147transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 163..204
score: 8.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 164..204
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 164..204
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 162..208
score: 3.2
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 114..216
score: 6.5E-57coord: 20..63
score: 6.5
NoneNo IPR availablePANTHERPTHR14155:SF112SUBFAMILY NOT NAMEDcoord: 114..216
score: 6.5E-57coord: 20..63
score: 6.5
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 163..211
score: 8.13