CmoCh15G006730 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G006730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING/U-box superfamily protein, putative
LocationCmo_Chr15 : 3289192 .. 3290120 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACGCCAACTGAAGTAAAAGAACGAATTTTAAAGGGACGCATGGATTGATATTTCTTCGGATGTTTGAAAGATGACGTGTTTCATGATTACTTCCAATTAGGCTGCAGCCCAGGGCAACAAAGTTCGTGAGTGAAATGCAATAGACTTTCATGCTAGGCTGGAACTTGTAATGTGCTCTATATATATTTGACATGGAGTTGGCTTTATCTAGAACACACATGAGACAATTTTTATGAAACGAAATGTGTGCCTTTTGGTTCCAAAAATGATCAATTTAGATTCCAAAATTTCCAGCTCAAATATATTTACTCGTAGTCAATTATATTCTGTCTTGTCCATCTCTTGAATCAGTTCTTGTGGAACCGCCAAGAGGTAAGGTAAGAAATGGCTTGATGTTTTGCCAAAATGACAACTTTCCATTTCTTTGATCAAAACCTGCCTTCTCTGCCAAGAAAACTTATGGCCCCTAGAATATTGAAATGACCATGAGAGTTGGTTTCTTGTTGCCTTCTATGAAAGTTGTCTCGCAATGAAGAAACCAGCAAAATATGCAACCTCATATATCCTAATCCATGGCTCATGTTGCACTGTTCTCAATGATTTTTATCCTTTGTAAATGTTGGAACAGGTGAACTCAGATTTGATCATGGCCTTGGCAATGCAGCAGCAGGAGCATGAGATGCCCTATACGACGCTTGGGACCATCGAAAGTGATAGCGACGAAGATGAAAGGTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTCCAAGTTGAATATGAGGATAGTGAAGAATTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAAGCCTTCTAAAAATGCA

mRNA sequence

TACGCCAACTGAAGTGAACTCAGATTTGATCATGGCCTTGGCAATGCAGCAGCAGGAGCATGAGATGCCCTATACGACGCTTGGGACCATCGAAAGTGATAGCGACGAAGATGAAAGGTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTCCAAGTTGAATATGAGGATAGTGAAGAATTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAAGCCTTCTAAAAATGCA

Coding sequence (CDS)

ATGGCCTTGGCAATGCAGCAGCAGGAGCATGAGATGCCCTATACGACGCTTGGGACCATCGAAAGTGATAGCGACGAAGATGAAAGGTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTCCAAGTTGAATATGAGGATAGTGAAGAATTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAAGCCTTCTAAAAATGCA
Homology
[Close]
BLAST of CmoCh15G006730 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-09
Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 1 

Query: 19  TIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVC 78
           TI S   +  +   N N   ++    +++YED E+L  LPC+H YHSECI  W++I +VC
Sbjct: 266 TIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVC 325

Query: 79  PICGTEVSS 88
           P+C  EVS+
Sbjct: 326 PVCSAEVST 334

[Close]
BLAST of CmoCh15G006730 vs. Swiss-Prot
Match: BB_ARATH (E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.8e-08
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1 

Query: 45  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV 86
           Q++Y+  E    LPC+H YHSECI KW+ I +VCP+C +EV
Sbjct: 201 QLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241

[Close]
BLAST of CmoCh15G006730 vs. Swiss-Prot
Match: RN122_HUMAN (RING finger protein 122 OS=Homo sapiens GN=RNF122 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07
Identity = 17/42 (40.48%), Postives = 32/42 (76.19%), Query Frame = 1 

Query: 47  EYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP 89
           +++  +EL  LPC+H +H +C+VKW++++ VCP+C   ++SP
Sbjct: 99  DFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIASP 140

[Close]
BLAST of CmoCh15G006730 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-07
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 1 

Query: 48  YEDSEELAALPCEHPYHSECIVKWVQIKRVCPIC 82
           YED  EL ALPC H +HS CIVKW++++  CP+C
Sbjct: 314 YEDGAELHALPCNHHFHSTCIVKWLKMRATCPLC 347

[Close]
BLAST of CmoCh15G006730 vs. Swiss-Prot
Match: RN122_MOUSE (RING finger protein 122 OS=Mus musculus GN=Rnf122 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-07
Identity = 16/42 (38.10%), Postives = 31/42 (73.81%), Query Frame = 1 

Query: 47  EYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP 89
           +++  +EL  LPC+H +H +C+VKW++++ VCP+C   ++ P
Sbjct: 99  DFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGP 140

[Close]
BLAST of CmoCh15G006730 vs. TrEMBL
Match: A0A0A0KFS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382920 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-18
Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 1 

Query: 34  SNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN 93
           + +G+D     QVEY+D EELAALPCEHPYHSECI +W+QIKRVCPICGTEVSSP  SKN
Sbjct: 157 NRSGIDRCVICQVEYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKN 216

[Close]
BLAST of CmoCh15G006730 vs. TrEMBL
Match: A0A061FHG8_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_035161 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.9e-14
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 1 

Query: 35  NNGLDTNASFQVEYEDSEELAALP-CEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN 94
           N G+D  A  Q+EYE+ E + ALP CEHPYHSECI KW+QIKR+CPIC TE+SS K ++N
Sbjct: 145 NTGIDRCAICQMEYEEEEGVVALPNCEHPYHSECISKWLQIKRICPICSTEISSSKNARN 204

[Close]
BLAST of CmoCh15G006730 vs. TrEMBL
Match: A0A0B2SRX7_GLYSO (E3 ubiquitin ligase BIG BROTHER-related OS=Glycine soja GN=glysoja_018384 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.4e-14
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 1 

Query: 32  SNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPS 91
           + S +G+D     QVEYE+ E L AL CEHPYHS+CI KW+QIK+VCPICG EVS+P  +
Sbjct: 140 AESKSGIDRCVICQVEYEEGEALVALQCEHPYHSDCIRKWLQIKKVCPICGNEVSTPNLA 199

Query: 92  KN 94
            N
Sbjct: 200 SN 201

[Close]
BLAST of CmoCh15G006730 vs. TrEMBL
Match: C6T2M3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G249100 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.4e-14
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 1 

Query: 32  SNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPS 91
           + S +G+D     QVEYE+ E L AL CEHPYHS+CI KW+QIK+VCPICG EVS+P  +
Sbjct: 140 AESKSGIDRCVICQVEYEEGEALVALQCEHPYHSDCIRKWLQIKKVCPICGNEVSTPNLA 199

Query: 92  KN 94
            N
Sbjct: 200 SN 201

[Close]
BLAST of CmoCh15G006730 vs. TrEMBL
Match: A0A067K9Q5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12129 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.4e-14
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1 

Query: 34  SNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN 93
           + +G+D     QVEYE  E L ALPC+HPYHSECI  W+QIK++CPIC +EVSSPK  +N
Sbjct: 149 NKSGIDRCVICQVEYEGDESLVALPCDHPYHSECISNWLQIKKICPICNSEVSSPKIVRN 208

[Close]
BLAST of CmoCh15G006730 vs. TAIR10
Match: AT3G47180.1 (AT3G47180.1 RING/U-box superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-11
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 1 

Query: 32  SNSNNGLDTNASFQVEYEDSEELAAL-PCEHPYHSECIVKWVQIKRVCPICGTEVS 87
           S++ N +D     Q+E+E+ E L  L PC+HPYHSECI KW++ K++CPIC +E S
Sbjct: 153 SHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSEPS 208

[Close]
BLAST of CmoCh15G006730 vs. TAIR10
Match: AT3G19910.1 (AT3G19910.1 RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 7.8e-11
Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 1 

Query: 19  TIESDSDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVC 78
           TI S   +  +   N N   ++    +++YED E+L  LPC+H YHSECI  W++I +VC
Sbjct: 266 TIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVC 325

Query: 79  PICGTEVSS 88
           P+C  EVS+
Sbjct: 326 PVCSAEVST 334

[Close]
BLAST of CmoCh15G006730 vs. TAIR10
Match: AT3G63530.1 (AT3G63530.1 RING/U-box superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 3.3e-09
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1 

Query: 45  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV 86
           Q++Y+  E    LPC+H YHSECI KW+ I +VCP+C +EV
Sbjct: 201 QLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241

[Close]
BLAST of CmoCh15G006730 vs. TAIR10
Match: AT5G10650.1 (AT5G10650.1 RING/U-box superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08
Identity = 20/45 (44.44%), Postives = 28/45 (62.22%), Query Frame = 1 

Query: 45  QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPK 90
           Q EY D +EL  +PC+H YH  C+ +W+++K  CPIC T     K
Sbjct: 479 QEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEK 523

[Close]
BLAST of CmoCh15G006730 vs. TAIR10
Match: AT2G01735.1 (AT2G01735.1 RING-finger protein for embryogenesis)

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 1 

Query: 48  YEDSEELAALPCEHPYHSECIVKWVQIKRVCPIC 82
           YED  EL ALPC H +HS CIVKW++++  CP+C
Sbjct: 314 YEDGAELHALPCNHHFHSTCIVKWLKMRATCPLC 347

[Close]
BLAST of CmoCh15G006730 vs. NCBI nr
Match: gi|449464174|ref|XP_004149804.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17
Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 1 

Query: 34  SNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN 93
           + +G+D     QVEY+D EELAALPCEHPYHSECI +W+QIKRVCPICGTEVSSP  SKN
Sbjct: 157 NRSGIDRCVICQVEYDDGEELAALPCEHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKN 216

[Close]
BLAST of CmoCh15G006730 vs. NCBI nr
Match: gi|659133455|ref|XP_008466738.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-17
Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 1 

Query: 34  SNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN 93
           + +G+D     QVEY+D EELAALPC+HPYHSECI +W+QIKRVCPICGTEVSSP  SKN
Sbjct: 168 NKSGIDRCVICQVEYDDGEELAALPCQHPYHSECIGEWLQIKRVCPICGTEVSSPNGSKN 227

[Close]
BLAST of CmoCh15G006730 vs. NCBI nr
Match: gi|720070255|ref|XP_010277675.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform X2 [Nelumbo nucifera])

HSP 1 Score: 88.2 bits (217), Expect = 8.3e-15
Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 1 

Query: 29  RSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEVSSP 88
           +  S   NGLD     QVEYE+ E L ALPCEHPYHS+CI KW+QIKRVCPIC TEVS  
Sbjct: 133 KCQSECKNGLDRCVICQVEYEEGESLVALPCEHPYHSDCISKWLQIKRVCPICSTEVSPS 192

Query: 89  KPSKNA 95
           + S +A
Sbjct: 193 EHSSSA 198

[Close]
BLAST of CmoCh15G006730 vs. NCBI nr
Match: gi|720070251|ref|XP_010277674.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform X1 [Nelumbo nucifera])

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-14
Identity = 42/69 (60.87%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 29  RSDSNSNNGLDTNASF---QVEYEDSEELAALPCEHPYHSECIVKWVQIKRVCPICGTEV 88
           +  S   NGLD N      QVEYE+ E L ALPCEHPYHS+CI KW+QIKRVCPIC TEV
Sbjct: 133 KCQSECKNGLDRNGRCVICQVEYEEGESLVALPCEHPYHSDCISKWLQIKRVCPICSTEV 192

Query: 89  SSPKPSKNA 95
           S  + S +A
Sbjct: 193 SPSEHSSSA 201

[Close]
BLAST of CmoCh15G006730 vs. NCBI nr
Match: gi|590599262|ref|XP_007019133.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 85.1 bits (209), Expect = 7.1e-14
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 1 

Query: 35  NNGLDTNASFQVEYEDSEELAALP-CEHPYHSECIVKWVQIKRVCPICGTEVSSPKPSKN 94
           N G+D  A  Q+EYE+ E + ALP CEHPYHSECI KW+QIKR+CPIC TE+SS K ++N
Sbjct: 145 NTGIDRCAICQMEYEEEEGVVALPNCEHPYHSECISKWLQIKRICPICSTEISSSKNARN 204

The following BLAST results are available for this feature:
BLAST of CmoCh15G006730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BBR_ARATH1.4e-0942.03E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1[more]
BB_ARATH5.8e-0853.66E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1[more]
RN122_HUMAN1.7e-0740.48RING finger protein 122 OS=Homo sapiens GN=RNF122 PE=2 SV=2[more]
RIE1_ARATH3.8e-0758.82E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1[more]
RN122_MOUSE4.9e-0738.10RING finger protein 122 OS=Mus musculus GN=Rnf122 PE=2 SV=1[more]
BLAST of CmoCh15G006730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFS4_CUCSA7.3e-1873.33Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382920 PE=4 SV=1[more]
A0A061FHG8_THECC4.9e-1463.33RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_035161 PE=4 S... [more]
A0A0B2SRX7_GLYSO8.4e-1459.68E3 ubiquitin ligase BIG BROTHER-related OS=Glycine soja GN=glysoja_018384 PE=4 S... [more]
C6T2M3_SOYBN8.4e-1459.68Uncharacterized protein OS=Glycine max GN=GLYMA_04G249100 PE=2 SV=1[more]
A0A067K9Q5_JATCU8.4e-1460.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12129 PE=4 SV=1[more]
BLAST of CmoCh15G006730 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G47180.12.0e-1150.00 RING/U-box superfamily protein[more]
AT3G19910.17.8e-1142.03 RING/U-box superfamily protein[more]
AT3G63530.13.3e-0953.66 RING/U-box superfamily protein[more]
AT5G10650.12.1e-0844.44 RING/U-box superfamily protein[more]
AT2G01735.12.1e-0858.82 RING-finger protein for embryogenesis[more]
BLAST of CmoCh15G006730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464174|ref|XP_004149804.1|1.1e-1773.33PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis sativus][more]
gi|659133455|ref|XP_008466738.1|2.3e-1771.67PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo][more]
gi|720070255|ref|XP_010277675.1|8.3e-1562.12PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform X2 [Nelumbo nucifera][more]
gi|720070251|ref|XP_010277674.1|2.4e-1460.87PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform X1 [Nelumbo nucifera][more]
gi|590599262|ref|XP_007019133.1|7.1e-1463.33RING/U-box superfamily protein, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR024766Znf_RING_H2
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G006730.1CmoCh15G006730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 40..89
score: 1.0
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 46..81
score: 4.
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 45..93
score: 1.0
NoneNo IPR availablePANTHERPTHR14155:SF112SUBFAMILY NOT NAMEDcoord: 45..93
score: 1.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 47..88
score: 1.02

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G006730Cucsa.060580Cucumber (Gy14) v1cgycmoB0078
CmoCh15G006730CmaCh15G006640Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G006730CmaCh04G023760Cucurbita maxima (Rimu)cmacmoB693
CmoCh15G006730Cla013920Watermelon (97103) v1cmowmB250
CmoCh15G006730Csa6G382920Cucumber (Chinese Long) v2cmocuB298
CmoCh15G006730MELO3C010634Melon (DHL92) v3.5.1cmomeB259
CmoCh15G006730CSPI06G20190Wild cucumber (PI 183967)cmocpiB307
CmoCh15G006730CsaV3_6G034230Cucumber (Chinese Long) v3cmocucB0360
CmoCh15G006730Cla97C08G148640Watermelon (97103) v2cmowmbB302
CmoCh15G006730Bhi04G001498Wax gourdcmowgoB0386
CmoCh15G006730CsGy6G019670Cucumber (Gy14) v2cgybcmoB723
CmoCh15G006730Carg01545Silver-seed gourdcarcmoB1118
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G006730CmoCh04G024890Cucurbita moschata (Rifu)cmocmoB262
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G006730Cucurbita moschata (Rifu)cmocmoB008
CmoCh15G006730Cucurbita moschata (Rifu)cmocmoB245
CmoCh15G006730Cucurbita maxima (Rimu)cmacmoB037
CmoCh15G006730Wild cucumber (PI 183967)cmocpiB284
CmoCh15G006730Cucumber (Chinese Long) v2cmocuB276
CmoCh15G006730Melon (DHL92) v3.5.1cmomeB273
CmoCh15G006730Watermelon (Charleston Gray)cmowcgB242
CmoCh15G006730Watermelon (Charleston Gray)cmowcgB265
CmoCh15G006730Watermelon (97103) v1cmowmB279
CmoCh15G006730Cucurbita pepo (Zucchini)cmocpeB280
CmoCh15G006730Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G006730Cucurbita pepo (Zucchini)cmocpeB298
CmoCh15G006730Bottle gourd (USVL1VR-Ls)cmolsiB271
CmoCh15G006730Bottle gourd (USVL1VR-Ls)cmolsiB282
CmoCh15G006730Cucumber (Gy14) v2cgybcmoB459
CmoCh15G006730Melon (DHL92) v3.6.1cmomedB293
CmoCh15G006730Melon (DHL92) v3.6.1cmomedB307
CmoCh15G006730Cucumber (Chinese Long) v3cmocucB0333
CmoCh15G006730Watermelon (97103) v2cmowmbB280
CmoCh15G006730Wax gourdcmowgoB0404