Csa6G376230 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G376230
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTetratricopeptide repeat protein 33; contains IPR011990 (Tetratricopeptide-like helical)
LocationChr6 : 16946186 .. 16950303 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGATAGAACGTATTGGATCGAGCTTGGGCTGGGACGGTGGGTAGGATCAGGTTTGGGAGTTTGAGTCCGATGAAGGGATCCGACCCGGTATTGACAGAGAACTTCCCGGTTCCCTCTGAGTGGGAAAAGGTTATGCGGTGTTCGTACTGAATGGTTGGAGACGACGATGAAGCTCACATGGAAGAACAAGGGCAATAGTAAGAAGCGATCTCTTACAACTATTTCAACCCGTTCAAATCTTCCTTTTGAGGTACCTGGCGTGGTGGAGGAAGACGATAGGGCTAATCCCCAAGTTAAAGAAGTAACCGCCCAGCCGGTAGACCGGAGTGAGGATGAAGCTTCAGACCGTTCCCTTTCAGACCTCAAACGTCTCGCTGAATCATTTCAAGCTCAAGGCAATACGCTTGCGGAGGTACATGTGTTTTCCTTCTATATATTGTTAGTCTTCGATCATTTTACCCAAACTTGTTTACCTATTACTCTCTGTTCAATTGTGCTTTACAACTTTGTCTAATTTTGATTGTTAGATTTGTTTGTTCATGGAGAATGATAACTCCATGGGGATGAATTGAAGGGAAAAGAGTTACTCTGTAACAACCTTGCTGGTTTATGGTTACTGAGTAATCAAATGTTGATCACAACAGTAATATTCGAAAAAGCATCTCGTAGTCGTGTATGCGGTGTTTCTTGCAATGCAACAACAAAAAGTCTTCATGAACAATTTTTTCGGAACGTGAATATCATCAGCCTATAGTTCTAGGAAACTGTTGAAAGAGGGAAGTAGTTATTGAGGGTTGATAAATTTGAGTAGCACTTTAAAAACAATGACTAATTTTGGATCTTGCATTGGTTGAATTGGAATTTCTTGCATGCTTGCTTCTTGATCCTCTACCTCAGGAGAAACCTTTTGATTTTCTCCCTTGATGTATCATGTATGTTGCAAGTGAACTATAAAACAAACCTAATTGCAAATGAATCCTTGTTGTAGGTTATATTTTTTAATGAAACTATTTGCAGTTCTTAAGTTAAAGTTTTTATTTTTATTTTCTATTGTGTTATTCCGTATATTGAAGAAACTATCGGTGGATTAATAGTTTGTTTGTTGTATGAACATACGGTGTGGTTTTCATTCTCGAGGATTTTCATTTTAAATTATGCTGTTTGGTCTTAAAATATTATATGAAAGAAGATATAAGGTTTATCTCTTATGAGAAGTTGAGAAGCCATTTTGTAAATTTGTATGTGATGTATTATACCGAAGGTTTACAAGGAATTCTTAATCCAGCAAGATTGTTTCCAATTGAACGTGTAGAGATGATTCAGATCACATGACTATTTGGTGCATAGAAATATTATTATTTGCTACCGGTCATAATGACTATTAGGTTAGTTTTGGACTCAAACGTGAGCTTGTCACAAATTTTTGGGTTCTTTTAGACCCCCAGTTATATTAAAATATAGTAGAAAAGGAAAGAAAGGGAATGCACGTGTAATGGGAGTGTGAGTGCTAGGAATGGGGCAGACAGTTAGTTAGGAGGGAAAGGGTGGTTTAAATAGCAGGGGAATCATGGAATGTGGGGGGGATCATTTTGGAGAGTTTTCTGTTTTCATTCTTGATAGAGAGGAGAAGCAGAAAGGAGTTATCATTTTCTTTTCTGTAATTTTGCTTTTCTGTTATAGAATTGGCTCACAGTCAATTCCTTCATTGTTCTTCAATTTACTAATTGAATAAGATCACTCTTAGTGGTTTTCTATCAGGTTCCTTGGAGAATTTACTTTAAAAATGAAGCTTTTGGAGTGGCCTTCATTTATGTTTTGCTATAGATATTTTCCTCAAGCTTTGACATTTAGATGTTGAATATTTCGATTATACTCCAAGGCCATGTGCTTTTTCCTTTTTTAGGGTGGGAAATTCCGGGAGGCTCTGGGAAAATGGGAGACTGCTCTTACTTTGATGCCCGAAAATGCAGTTTTACATGAACAAAAGGCACAAGTTCTACTGGAGGTTGGGGAAGCTTGGGGTGCTTTGAAGGCTGCAACCAGTATGTTCTTTTCAATTACCTTTATTTTTTTCGATTGTCTAAAATTTTCATTTTAGTCGGAGAGCTCTATTTTGAAATGAAATTGGTGATCGGTTCTTAGGGTATATGCATGGGCATACTAATGAGTTTTATCTGTACAATCAAATTTTGTTTCTGATTTGAGTGATGAAGTCATAAGCTTTTTTTCCCTTTTTTGGTTGTAAGGAGCTTGCTTTTCTATAATTTGTTTTTGGACATTTTATATTACTTTATCTGGTGGTCTGTATTTGAATTTGAACTCTATCTGCAGGAGCTACTGACTTAGATCCATCATGGGCTGAGGTACAACTAATTCTTATACTGTCAATACAATACCAATATCTCTGATGCGCCTTTTACTCCACATTTTGTCTCAGGTGATTCCATCCGTTTAATTGCCTATTTTCTGCTAAGAACTTGCATCTGGGTATTCATTCGCTTCATATTTTTAGTGACCATCAGAAAGCTCTTTGTACGGAATTCATGTAGATTACTTTTTCTTGTTATTAAATGTTTTGAATGAATCCTTTTTGAACCAGCAAAAATAGACATCTATTTTGTACTTTGAAGTGCAAAAATAGACATGCTTTTTGCTTATGCTCAAAATCATGTTCAGCTTGAGACTCCAGCTTATTACCACAAGGAAATATGACAAGGAGGTGGAGGAGAAGAGCTAAAGGGAATTAGTGATACATGTTTTGTAATTTTTGTTGGGGTTTGGAGGTAAAGGTGGAAGTTTACTCGAGGAAAGGGTGAAAACTTGAGAGACATAGCAGGCAGGAAAGAAATTATATTTTATTTCTAATAGATCTGATTACATGACACTGCCTTGTGCATTCAATTTGCTAAATCCAAGCATCAGTGTTTAGAAATCATTTAGTTGGGTCTTTGACACCCAAATGTTGTTGGGTTAGGCGAGTTGTCCCGTGAGATTAGTCGAAGCGCACGTAAGTTGACGGATATATATAAAAAATCATTTAGTTGGATTTGATGCAATGTTTCTGTTAGCTTTCTAGGATCTTCCATTCAAGATAAGTTTCTGTTGCATAGGGACATCCAGTAAGTTGTAACACAATTGTCTGGCTGACCAGCTTTCCTTGTTGAGATGATTTGTTGATAACTTGAAATAGTTAAAATTTCTTCGTTCATCATGCAGGTTACCTAGATTCAATGAATGTGAAGAAGCTAGACTCATTTGTTAGTTTTTAATTGGCTTTTTATCCTTTTTCATGTTGAATATGATTAGGCGTGGATCACCCTTGGTAGAGCACAGTTAAACTTTGGGGAACCAGATAGTGCTATAGAAAGCTTTGACAGAGCACTGGCCATTAAGGTAACACCGATTTTAGCATGTTCATCCGTTTGTGTTTATACCAACGTTGACACTCTGCTTAAGCCTACTGAATAAGATATCTTGTTCTGTGCTGCCCTGATTCGGTTGGCCTGTCTTGTATGCTTGCATAGTCAGTTTAAATCTTAGCCCTCATACTAGTTTCCCATAGAAACCGTATACCAATCATTTTGGGAGCTAGGCTCAGTCTAAAGCACTGGTCCCTTGCATCATTACCAAAACCCCTAACAACACAGGGTCAAAGTCCATTAAAACTCTGCTCTATAAGACCTTAATTTTATGTTGAACAAAAATGCTCTGTTGTGCAGCCTGATTCTGGGGATGTTCAAGATGACCGACAAACTGCAATGCGTCTTATAAAGCGGCGAAAACAGCTCCATTCAGCTGGGTTGAGCAGTTCTAAAAATCGTTATTTGGTGGGAGAGAAGTTGAGCGATGCTGATGGTTCATGAAGTGTATTCTGGTAAAGGATCGGATGTAGTTTGTAATTTAGGTTCTTAAAGCAGGGTTGAGTTTCCCCATGATCAAAAGCATCGTGTATGTGTATTCCGAAAAAAAGAAAAGAAAATGCCGTATTTACTCAGGTTTATTTAGTTTACAAATCAGTCCTGTGTGTTTTTTAAACTGAAACTATGAAAAAAAAAATAATACAAGTACCTAAACAGGGAAATGGTCTAAAATAACTACTTTTAGGCTGCGTTTTGA

mRNA sequence

ATGAAGCTCACATGGAAGAACAAGGGCAATAGTAAGAAGCGATCTCTTACAACTATTTCAACCCGTTCAAATCTTCCTTTTGAGGTACCTGGCGTGGTGGAGGAAGACGATAGGGCTAATCCCCAAGTTAAAGAAGTAACCGCCCAGCCGGTAGACCGGAGTGAGGATGAAGCTTCAGACCGTTCCCTTTCAGACCTCAAACGTCTCGCTGAATCATTTCAAGCTCAAGGCAATACGCTTGCGGAGGGTGGGAAATTCCGGGAGGCTCTGGGAAAATGGGAGACTGCTCTTACTTTGATGCCCGAAAATGCAGTTTTACATGAACAAAAGGCACAAGTTCTACTGGAGGTTGGGGAAGCTTGGGGTGCTTTGAAGGCTGCAACCAGAGCTACTGACTTAGATCCATCATGGGCTGAGGCGTGGATCACCCTTGGTAGAGCACAGTTAAACTTTGGGGAACCAGATAGTGCTATAGAAAGCTTTGACAGAGCACTGGCCATTAAGCCTGATTCTGGGGATGTTCAAGATGACCGACAAACTGCAATGCGTCTTATAAAGCGGCGAAAACAGCTCCATTCAGCTGGGTTGAGCAGTTCTAAAAATCGTTATTTGGTGGGAGAGAAGTTGAGCGATGCTGATGGTTCATGA

Coding sequence (CDS)

ATGAAGCTCACATGGAAGAACAAGGGCAATAGTAAGAAGCGATCTCTTACAACTATTTCAACCCGTTCAAATCTTCCTTTTGAGGTACCTGGCGTGGTGGAGGAAGACGATAGGGCTAATCCCCAAGTTAAAGAAGTAACCGCCCAGCCGGTAGACCGGAGTGAGGATGAAGCTTCAGACCGTTCCCTTTCAGACCTCAAACGTCTCGCTGAATCATTTCAAGCTCAAGGCAATACGCTTGCGGAGGGTGGGAAATTCCGGGAGGCTCTGGGAAAATGGGAGACTGCTCTTACTTTGATGCCCGAAAATGCAGTTTTACATGAACAAAAGGCACAAGTTCTACTGGAGGTTGGGGAAGCTTGGGGTGCTTTGAAGGCTGCAACCAGAGCTACTGACTTAGATCCATCATGGGCTGAGGCGTGGATCACCCTTGGTAGAGCACAGTTAAACTTTGGGGAACCAGATAGTGCTATAGAAAGCTTTGACAGAGCACTGGCCATTAAGCCTGATTCTGGGGATGTTCAAGATGACCGACAAACTGCAATGCGTCTTATAAAGCGGCGAAAACAGCTCCATTCAGCTGGGTTGAGCAGTTCTAAAAATCGTTATTTGGTGGGAGAGAAGTTGAGCGATGCTGATGGTTCATGA

Protein sequence

MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASDRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEAWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQTAMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS*
Homology
[Close]
BLAST of Csa6G376230 vs. Swiss-Prot
Match: TTC33_DANRE (Tetratricopeptide repeat protein 33 OS=Danio rerio GN=ttc33 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.9e-20
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 63  LSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEAWG 122
           L D    ++  + +G  LAE  +  EAL KW+ A+ L PE+AVL+E K+QVL+ +GE + 
Sbjct: 53  LEDCAAKSKRLKEEGALLAEQDRNWEALKKWDEAVQLTPEDAVLYEMKSQVLITLGEVFL 112

Query: 123 ALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDV-QDDRQTA 182
           A+++A  AT L P W EAW TLGRAQL+ GE + A+ SF  AL + P    + ++D   A
Sbjct: 113 AVQSAEMATRLRPIWWEAWQTLGRAQLSLGEVELAVRSFQVALHLHPSERPLWEEDLNWA 172

Query: 183 MRLIKRRKQLHSAGLSSSKNRYLVGE 208
           ++L + ++ L        + R L+ E
Sbjct: 173 LKLRENQQSLREKASQVDEARRLLVE 198

[Close]
BLAST of Csa6G376230 vs. Swiss-Prot
Match: TTC33_XENLA (Tetratricopeptide repeat protein 33 OS=Xenopus laevis GN=ttc33 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.8e-19
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 1 

Query: 51  VDRSEDEASDRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQK 110
           + R +D   + +++  KRL E    +G  LAE G+ +EAL KW+ A+ L P +A L+E K
Sbjct: 44  IKRKKDVLLEDNVAKSKRLKE----EGGLLAEDGRQKEALTKWDEAIQLTPGDAALYEMK 103

Query: 111 AQVLLEVGEAWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPD 170
           AQVL+ V E + A++AA  A   +P + EAW TLGRAQL+ GE   AI SF   L I P 
Sbjct: 104 AQVLMGVHEIFPAVQAAETAVQRNPHFVEAWQTLGRAQLSLGEITMAIRSFQIGLHICPA 163

Query: 171 SGDV-QDDRQTAMRLIKRRKQLHSA 195
           + ++ + D   A +L+ ++    SA
Sbjct: 164 NTELWEQDLNWARQLLLQKMDTESA 184

[Close]
BLAST of Csa6G376230 vs. Swiss-Prot
Match: TTC33_MOUSE (Tetratricopeptide repeat protein 33 OS=Mus musculus GN=Ttc33 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 64/183 (34.97%), Postives = 96/183 (52.46%), Query Frame = 1 

Query: 12  KKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASDRSLSDL----K 71
           K+R    +S  ++  FE     E+D           A+  D +  +AS R    L    K
Sbjct: 7   KRRIGEKVSKATSQQFEAEAADEKD----------AAENEDGNWLQASKRRKETLQEGCK 66

Query: 72  RLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEAWGALKAA 131
           + ++  + +G  LAE  +++EA+ KW+ AL L P +A L+E K+QVLL + E + A+ AA
Sbjct: 67  QRSQQLKDEGAQLAENKRYKEAIQKWDEALQLTPGDATLYEMKSQVLLSLHEMFPAVHAA 126

Query: 132 TRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDV-QDDRQTAMRLIK 190
             A   +P   EAW TLGRAQL  GE   AI SF  AL I P + ++ ++D   A +L +
Sbjct: 127 EMAVKRNPHSWEAWQTLGRAQLGLGEIVLAIRSFQIALHIYPMNPELWKEDLSWARKLQE 179

[Close]
BLAST of Csa6G376230 vs. Swiss-Prot
Match: TTC33_HUMAN (Tetratricopeptide repeat protein 33 OS=Homo sapiens GN=TTC33 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 6.0e-16
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 1 

Query: 5   WKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASDRSLS 64
           WK K   K      +S  ++  FE     E+D   N +   + A  + R ++   +    
Sbjct: 6   WKRKIGEK------VSKVTSQQFEAEAADEKDVVDNDEGNWLHA--IKRRKEILLEGCAE 65

Query: 65  DLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEAWGAL 124
             K+L +    +G +LAE  ++REA+ KW+ AL L P +A L+E K+QVL+ + E + A+
Sbjct: 66  KSKQLKD----EGASLAENKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMFPAV 125

Query: 125 KAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDV-QDDRQTAMR 184
            AA  A   +P   E+W TLGRAQL  GE   AI SF  AL I P + ++ ++D   A  
Sbjct: 126 HAAEMAVQQNPHSWESWQTLGRAQLGLGEIILAIRSFQVALHIYPMNPEIWKEDLSWART 179

Query: 185 LIKRRK 190
           L +++K
Sbjct: 186 LQEQQK 179

[Close]
BLAST of Csa6G376230 vs. Swiss-Prot
Match: HSOP_WHEAT (Hsp70-Hsp90 organizing protein OS=Triticum aestivum GN=HOP PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.5e-11
Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 1 

Query: 69  LAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEAWGALKAAT 128
           +A+  +A+GN     G+F EA G +  A+ L P N VL+  ++  L  +     AL  A 
Sbjct: 1   MADEAKAKGNAAFSAGRFEEAAGHFSDAIALAPANHVLYSNRSAALASIHRYSDALADAE 60

Query: 129 RATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDS 172
           +  +L P WA+ +  LG A L  G+  SA  ++++ LA+ P +
Sbjct: 61  KTVELKPDWAKGYSRLGAAHLGLGDAASAAAAYEKGLALDPSN 103

[Close]
BLAST of Csa6G376230 vs. TrEMBL
Match: A0A0A0KH06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376230 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 7.9e-116
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1 

Query: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD 60
           MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD
Sbjct: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD 60

Query: 61  RSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEA 120
           RSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEA
Sbjct: 61  RSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEA 120

Query: 121 WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQT 180
           WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQT
Sbjct: 121 WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQT 180

Query: 181 AMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS 216
           AMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS
Sbjct: 181 AMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS 215

[Close]
BLAST of Csa6G376230 vs. TrEMBL
Match: A0A061FHS4_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_035238 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.9e-69
Identity = 145/210 (69.05%), Postives = 166/210 (79.05%), Query Frame = 1 

Query: 1   MKLTW-KNKG-NSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEA 60
           MKLTW KNK  N+KKRSL  I+   NLPFE     ++   A  Q +E  A      E  +
Sbjct: 1   MKLTWNKNKNKNNKKRSLEAIAHYPNLPFE-----QQKPDAQLQSEEPAAS--QNHEKSS 60

Query: 61  SDRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVG 120
           +D   SD KRLA+SFQAQGN LAE GK+REALGKWE AL LMPENAVLHEQKAQ+LLE+G
Sbjct: 61  ADSLDSDSKRLAQSFQAQGNMLAEDGKYREALGKWEGALNLMPENAVLHEQKAQILLEIG 120

Query: 121 EAWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDR 180
           +AW ALKAATRAT L+PSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDS + QDDR
Sbjct: 121 DAWSALKAATRATQLEPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSVEAQDDR 180

Query: 181 QTAMRLIKRRKQLHSAGLSSSKNRYLVGEK 209
           +TA+ LIKRRKQLHS+ LS+ KNRY+VG++
Sbjct: 181 KTAVHLIKRRKQLHSSSLSTDKNRYMVGDR 203

[Close]
BLAST of Csa6G376230 vs. TrEMBL
Match: A0A0B0PW42_GOSAR (Tetratricopeptide repeat 33 OS=Gossypium arboreum GN=F383_14750 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-68
Identity = 141/208 (67.79%), Postives = 166/208 (79.81%), Query Frame = 1 

Query: 1   MKLTW-KNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEAS 60
           MKLTW KNK N+KKRS   I++  NLPF+      +D +   Q +   +Q  D+   +A 
Sbjct: 1   MKLTWNKNKNNNKKRSREAIASYPNLPFDQQDPSHDDMQLQNQ-EHAHSQHQDKPSADAL 60

Query: 61  DRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGE 120
           D   SD K+LA+SFQAQGN LAE GK+REALGKWETAL LMPENAVL EQKAQVLLE+G+
Sbjct: 61  D---SDFKQLAQSFQAQGNKLAEDGKYREALGKWETALNLMPENAVLLEQKAQVLLELGD 120

Query: 121 AWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQ 180
           AW ALKAATRAT+L+PSWAEAWITLGR+QLNFGEPDSAIESF RALAIKPDS + QDDR+
Sbjct: 121 AWSALKAATRATELEPSWAEAWITLGRSQLNFGEPDSAIESFGRALAIKPDSVEAQDDRK 180

Query: 181 TAMRLIKRRKQLHSAGLSSSKNRYLVGE 208
           TA  LIK+RKQLHS+GLS+ KNRY+VG+
Sbjct: 181 TASHLIKKRKQLHSSGLSTDKNRYMVGD 204

[Close]
BLAST of Csa6G376230 vs. TrEMBL
Match: A0A0D2TV38_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G249600 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.0e-67
Identity = 140/208 (67.31%), Postives = 165/208 (79.33%), Query Frame = 1 

Query: 1   MKLTW-KNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEAS 60
           MKLTW KNK N+KKRS   I++  NLPF++     +D +   Q +   +Q  D+   +A 
Sbjct: 1   MKLTWNKNKSNNKKRSREAIASYPNLPFDLQDPSHDDMQLQNQ-EHAHSQHQDKPSADAL 60

Query: 61  DRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGE 120
           D   SD K+LA+ FQAQGN LAE GKFREALGKWETAL LMPENAVL EQKAQVLLE+G+
Sbjct: 61  D---SDFKQLAQFFQAQGNKLAEDGKFREALGKWETALNLMPENAVLLEQKAQVLLELGD 120

Query: 121 AWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQ 180
           AW ALKAATRAT+L+ SWAEAWITLGR+QLNFGEPDSAIESF RALAIKPDS + QDDR+
Sbjct: 121 AWSALKAATRATELESSWAEAWITLGRSQLNFGEPDSAIESFGRALAIKPDSVEAQDDRK 180

Query: 181 TAMRLIKRRKQLHSAGLSSSKNRYLVGE 208
           TA  LIK+RKQLHS+GLS+ KNRY+VG+
Sbjct: 181 TASHLIKKRKQLHSSGLSTDKNRYMVGD 204

[Close]
BLAST of Csa6G376230 vs. TrEMBL
Match: A0A067K9T8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12174 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.6e-66
Identity = 134/214 (62.62%), Postives = 164/214 (76.64%), Query Frame = 1 

Query: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEV--TAQPVDRSEDEA 60
           MKLTWK    SKKR L  IS   NLPF+     EE  + + + ++   + Q V  +E   
Sbjct: 1   MKLTWKKDNKSKKRPLAAISKYPNLPFDQQQDFEESIKTDNKNEDNGNSKQVVTSNEPSN 60

Query: 61  SDRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVG 120
           SD       +LAESFQ+QGN LAE GK+REALGKWE AL LMPE+AVLHEQKAQVLLE+G
Sbjct: 61  SDSD----SQLAESFQSQGNKLAEDGKYREALGKWEAALNLMPESAVLHEQKAQVLLEIG 120

Query: 121 EAWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDR 180
           +AW AL+AATRA++L+PSWAEAW+TLGRAQLNFGEPDSAI+SFDRALAIKPD  + QDDR
Sbjct: 121 DAWNALRAATRASELEPSWAEAWVTLGRAQLNFGEPDSAIKSFDRALAIKPDYKEAQDDR 180

Query: 181 QTAMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDA 213
            TA+ L+KRRKQLHS+GLS+ K+R+LVG+K+  +
Sbjct: 181 HTAVHLVKRRKQLHSSGLSADKSRFLVGDKVESS 210

[Close]
BLAST of Csa6G376230 vs. TAIR10
Match: AT1G77230.1 (AT1G77230.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 211.1 bits (536), Expect = 6.9e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1 

Query: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEV----TAQPVDRSE- 60
           MKLTW    N KKRS   +S   +LPFE    +E     + +  ++    T   +D SE 
Sbjct: 1   MKLTWNK--NPKKRSRLVLSNFPDLPFEKDDSLESQSHLHFREDDIDRRQTTDQLDSSEV 60

Query: 61  --DEASDRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQV 120
             +   +    + K+LAES +AQG+  AE GK++EALGKWE AL L+PE+A+LHEQKAQV
Sbjct: 61  GGNHPRENFDVEAKKLAESIRAQGDKFAEEGKYQEALGKWEAALNLVPEDAILHEQKAQV 120

Query: 121 LLEVGEAWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGD 180
           LLE+G+AW ALKAATRAT++DPSWAEAW TLGRAQLNFGEPDSAI SF+ AL I  DS +
Sbjct: 121 LLELGDAWKALKAATRATEIDPSWAEAWTTLGRAQLNFGEPDSAIRSFESALLINADSRE 180

Query: 181 VQDDRQTAMRLIKRRKQLHSAGLSSSKNRYLVGEK 209
            +DD ++A +LIK+R+QL ++G  +   R++V +K
Sbjct: 181 AKDDLKSAKQLIKKREQLQTSGQDTDTTRFVVNDK 213

[Close]
BLAST of Csa6G376230 vs. TAIR10
Match: AT4G12400.2 (AT4G12400.2 stress-inducible protein, putative)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 26/103 (25.24%), Postives = 49/103 (47.57%), Query Frame = 1 

Query: 69  LAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEAWGALKAAT 128
           +AE  +++GN     G +  A+  +  A+ L P N +L+  ++     +     AL  A 
Sbjct: 1   MAEEAKSKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAK 60

Query: 129 RATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDS 172
           +  +L P W++ +  LG A +   + D A++S+ + L I P +
Sbjct: 61  KTIELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSN 103

[Close]
BLAST of Csa6G376230 vs. TAIR10
Match: AT3G04240.1 (AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.9e-06
Identity = 30/115 (26.09%), Postives = 52/115 (45.22%), Query Frame = 1 

Query: 57  EASDRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLE 116
           +   ++LS    L ++    GN +   G   EA   +  A+ + P  A+     A + +E
Sbjct: 176 QCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFME 235

Query: 117 VGEAWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDS 172
            G+   AL+    A  L P++ +A++ LG      G P  AI  +  AL ++P+S
Sbjct: 236 SGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNS 290

[Close]
BLAST of Csa6G376230 vs. TAIR10
Match: AT3G14950.1 (AT3G14950.1 tetratricopetide-repeat thioredoxin-like 2)

HSP 1 Score: 48.1 bits (113), Expect = 7.8e-06
Identity = 29/87 (33.33%), Postives = 39/87 (44.83%), Query Frame = 1 

Query: 71  ESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEAWGALKAATRA 130
           E  +  GN +   G F EAL  ++ A+ L P NA  H  +A  L  +G+   A+     A
Sbjct: 259 EEVKRFGNEMFRKGCFAEALKLYDRAIELSPSNATYHSNRAAALSSLGQIGEAVNECEIA 318

Query: 131 TDLDPSWAEAWITLGRAQLNFGEPDSA 158
             LDP++A A   L    L  G  D+A
Sbjct: 319 IKLDPNFARAHHRLASLLLRLGYVDNA 345

[Close]
BLAST of Csa6G376230 vs. NCBI nr
Match: gi|449463430|ref|XP_004149437.1| (PREDICTED: tetratricopeptide repeat protein 33 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 1.1e-115
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1 

Query: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD 60
           MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD
Sbjct: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD 60

Query: 61  RSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEA 120
           RSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEA
Sbjct: 61  RSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEA 120

Query: 121 WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQT 180
           WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQT
Sbjct: 121 WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQT 180

Query: 181 AMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS 216
           AMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS
Sbjct: 181 AMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS 215

[Close]
BLAST of Csa6G376230 vs. NCBI nr
Match: gi|659081980|ref|XP_008441602.1| (PREDICTED: tetratricopeptide repeat protein 33 [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 1.3e-103
Identity = 194/215 (90.23%), Postives = 202/215 (93.95%), Query Frame = 1 

Query: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD 60
           MKLTWKNK NSKKRSL  IS+RSNLPFEVPG V EDD ANP  KEVTAQPVD+SE EASD
Sbjct: 1   MKLTWKNKANSKKRSLAPISSRSNLPFEVPGEVGEDDAANPLDKEVTAQPVDQSEGEASD 60

Query: 61  RSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGEA 120
           RS SDLKRLAESFQAQG+TLAE GKFREALGKWETALTLMPENA+LHEQKAQVLLEVGEA
Sbjct: 61  RSFSDLKRLAESFQAQGDTLAESGKFREALGKWETALTLMPENAILHEQKAQVLLEVGEA 120

Query: 121 WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQT 180
           WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFD+ALAIKPDSGD QDDRQT
Sbjct: 121 WGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDKALAIKPDSGDAQDDRQT 180

Query: 181 AMRLIKRRKQLHSAGLSSSKNRYLVGEKLSDADGS 216
           AMRLIKRRKQLHS+GLSSS NRYLVGEKLS+ADG+
Sbjct: 181 AMRLIKRRKQLHSSGLSSSNNRYLVGEKLSNADGT 215

[Close]
BLAST of Csa6G376230 vs. NCBI nr
Match: gi|590599677|ref|XP_007019248.1| (Tetratricopeptide repeat-like superfamily protein [Theobroma cacao])

HSP 1 Score: 270.4 bits (690), Expect = 2.7e-69
Identity = 145/210 (69.05%), Postives = 166/210 (79.05%), Query Frame = 1 

Query: 1   MKLTW-KNKG-NSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEA 60
           MKLTW KNK  N+KKRSL  I+   NLPFE     ++   A  Q +E  A      E  +
Sbjct: 1   MKLTWNKNKNKNNKKRSLEAIAHYPNLPFE-----QQKPDAQLQSEEPAAS--QNHEKSS 60

Query: 61  SDRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVG 120
           +D   SD KRLA+SFQAQGN LAE GK+REALGKWE AL LMPENAVLHEQKAQ+LLE+G
Sbjct: 61  ADSLDSDSKRLAQSFQAQGNMLAEDGKYREALGKWEGALNLMPENAVLHEQKAQILLEIG 120

Query: 121 EAWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDR 180
           +AW ALKAATRAT L+PSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDS + QDDR
Sbjct: 121 DAWSALKAATRATQLEPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSVEAQDDR 180

Query: 181 QTAMRLIKRRKQLHSAGLSSSKNRYLVGEK 209
           +TA+ LIKRRKQLHS+ LS+ KNRY+VG++
Sbjct: 181 KTAVHLIKRRKQLHSSSLSTDKNRYMVGDR 203

[Close]
BLAST of Csa6G376230 vs. NCBI nr
Match: gi|728849216|gb|KHG28659.1| (Tetratricopeptide repeat 33 [Gossypium arboreum])

HSP 1 Score: 267.7 bits (683), Expect = 1.8e-68
Identity = 141/208 (67.79%), Postives = 166/208 (79.81%), Query Frame = 1 

Query: 1   MKLTW-KNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEAS 60
           MKLTW KNK N+KKRS   I++  NLPF+      +D +   Q +   +Q  D+   +A 
Sbjct: 1   MKLTWNKNKNNNKKRSREAIASYPNLPFDQQDPSHDDMQLQNQ-EHAHSQHQDKPSADAL 60

Query: 61  DRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGE 120
           D   SD K+LA+SFQAQGN LAE GK+REALGKWETAL LMPENAVL EQKAQVLLE+G+
Sbjct: 61  D---SDFKQLAQSFQAQGNKLAEDGKYREALGKWETALNLMPENAVLLEQKAQVLLELGD 120

Query: 121 AWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQ 180
           AW ALKAATRAT+L+PSWAEAWITLGR+QLNFGEPDSAIESF RALAIKPDS + QDDR+
Sbjct: 121 AWSALKAATRATELEPSWAEAWITLGRSQLNFGEPDSAIESFGRALAIKPDSVEAQDDRK 180

Query: 181 TAMRLIKRRKQLHSAGLSSSKNRYLVGE 208
           TA  LIK+RKQLHS+GLS+ KNRY+VG+
Sbjct: 181 TASHLIKKRKQLHSSGLSTDKNRYMVGD 204

[Close]
BLAST of Csa6G376230 vs. NCBI nr
Match: gi|823228553|ref|XP_012447025.1| (PREDICTED: tetratricopeptide repeat protein 33 [Gossypium raimondii])

HSP 1 Score: 264.6 bits (675), Expect = 1.5e-67
Identity = 140/208 (67.31%), Postives = 165/208 (79.33%), Query Frame = 1 

Query: 1   MKLTW-KNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEAS 60
           MKLTW KNK N+KKRS   I++  NLPF++     +D +   Q +   +Q  D+   +A 
Sbjct: 1   MKLTWNKNKSNNKKRSREAIASYPNLPFDLQDPSHDDMQLQNQ-EHAHSQHQDKPSADAL 60

Query: 61  DRSLSDLKRLAESFQAQGNTLAEGGKFREALGKWETALTLMPENAVLHEQKAQVLLEVGE 120
           D   SD K+LA+ FQAQGN LAE GKFREALGKWETAL LMPENAVL EQKAQVLLE+G+
Sbjct: 61  D---SDFKQLAQFFQAQGNKLAEDGKFREALGKWETALNLMPENAVLLEQKAQVLLELGD 120

Query: 121 AWGALKAATRATDLDPSWAEAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQ 180
           AW ALKAATRAT+L+ SWAEAWITLGR+QLNFGEPDSAIESF RALAIKPDS + QDDR+
Sbjct: 121 AWSALKAATRATELESSWAEAWITLGRSQLNFGEPDSAIESFGRALAIKPDSVEAQDDRK 180

Query: 181 TAMRLIKRRKQLHSAGLSSSKNRYLVGE 208
           TA  LIK+RKQLHS+GLS+ KNRY+VG+
Sbjct: 181 TASHLIKKRKQLHSSGLSTDKNRYMVGD 204

The following BLAST results are available for this feature:
BLAST of Csa6G376230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TTC33_DANRE8.9e-2039.04Tetratricopeptide repeat protein 33 OS=Danio rerio GN=ttc33 PE=2 SV=1[more]
TTC33_XENLA9.8e-1940.00Tetratricopeptide repeat protein 33 OS=Xenopus laevis GN=ttc33 PE=2 SV=1[more]
TTC33_MOUSE1.2e-1634.97Tetratricopeptide repeat protein 33 OS=Mus musculus GN=Ttc33 PE=1 SV=1[more]
TTC33_HUMAN6.0e-1633.87Tetratricopeptide repeat protein 33 OS=Homo sapiens GN=TTC33 PE=1 SV=2[more]
HSOP_WHEAT7.5e-1132.04Hsp70-Hsp90 organizing protein OS=Triticum aestivum GN=HOP PE=1 SV=1[more]
BLAST of Csa6G376230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH06_CUCSA7.9e-116100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376230 PE=4 SV=1[more]
A0A061FHS4_THECC1.9e-6969.05Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0352... [more]
A0A0B0PW42_GOSAR1.2e-6867.79Tetratricopeptide repeat 33 OS=Gossypium arboreum GN=F383_14750 PE=4 SV=1[more]
A0A0D2TV38_GOSRA1.0e-6767.31Uncharacterized protein OS=Gossypium raimondii GN=B456_009G249600 PE=4 SV=1[more]
A0A067K9T8_JATCU2.6e-6662.62Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12174 PE=4 SV=1[more]
BLAST of Csa6G376230 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G77230.16.9e-5552.09 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G12400.21.8e-0725.24 stress-inducible protein, putative[more]
AT3G04240.15.9e-0626.09 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G14950.17.8e-0633.33 tetratricopetide-repeat thioredoxin-like 2[more]
BLAST of Csa6G376230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449463430|ref|XP_004149437.1|1.1e-115100.00PREDICTED: tetratricopeptide repeat protein 33 [Cucumis sativus][more]
gi|659081980|ref|XP_008441602.1|1.3e-10390.23PREDICTED: tetratricopeptide repeat protein 33 [Cucumis melo][more]
gi|590599677|ref|XP_007019248.1|2.7e-6969.05Tetratricopeptide repeat-like superfamily protein [Theobroma cacao][more]
gi|728849216|gb|KHG28659.1|1.8e-6867.79Tetratricopeptide repeat 33 [Gossypium arboreum][more]
gi|823228553|ref|XP_012447025.1|1.5e-6767.31PREDICTED: tetratricopeptide repeat protein 33 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0018298 protein-chromophore linkage
cellular_component GO:0005575 cellular_component
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
molecular_function GO:0005515 protein binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU102515cucumber EST collection version 3.0transcribed_cluster
CU125048cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G376230.1Csa6G376230.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU125048CU125048transcribed_cluster
CU102515CU102515transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 70..187
score: 1.3
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 58..186
score: 3.04
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 70..171
score: 24
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 138..171
score: 7.3E-5coord: 104..137
score: 76.0coord: 70..103
score:
IPR019734Tetratricopeptide repeatPROFILEPS50005TPRcoord: 138..171
score: 12.685coord: 104..137
score: 5.458coord: 70..103
score: 9
NoneNo IPR availablePANTHERPTHR15544OSMOSIS RESPONSIVE FACTORcoord: 1..208
score: 4.9
NoneNo IPR availablePFAMPF13432TPR_16coord: 110..171
score: 6.