Csa6G147550 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G147550
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 10212654 .. 10212890 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGAAGATCAGAAGAATGCGAGTTTTTAGGCAAAAATCTAAGAAACAGAGGCATTCCGATGATTTAAGATTTGGGTTCGAGAATGGAAGTGAGAATATGGGGTCGAGTATGGAAATGAAAGACGAAGGATTGGAATCGAAGGGTACCGGAGTTAAGACTGTGGAAATGATTTACGTGAGTGGTCTGGGTAAGGAATTGGATCGACGATTGGGTGTTTTGAGGAGGTTTTGA

mRNA sequence

ATGGGTTTGAAGATCAGAAGAATGCGAGTTTTTAGGCAAAAATCTAAGAAACAGAGGCATTCCGATGATTTAAGATTTGGGTTCGAGAATGGAAGTGAGAATATGGGGTCGAGTATGGAAATGAAAGACGAAGGATTGGAATCGAAGGGTACCGGAGTTAAGACTGTGGAAATGATTTACGTGAGTGGTCTGGGTAAGGAATTGGATCGACGATTGGGTGTTTTGAGGAGGTTTTGA

Coding sequence (CDS)

ATGGGTTTGAAGATCAGAAGAATGCGAGTTTTTAGGCAAAAATCTAAGAAACAGAGGCATTCCGATGATTTAAGATTTGGGTTCGAGAATGGAAGTGAGAATATGGGGTCGAGTATGGAAATGAAAGACGAAGGATTGGAATCGAAGGGTACCGGAGTTAAGACTGTGGAAATGATTTACGTGAGTGGTCTGGGTAAGGAATTGGATCGACGATTGGGTGTTTTGAGGAGGTTTTGA

Protein sequence

MGLKIRRMRVFRQKSKKQRHSDDLRFGFENGSENMGSSMEMKDEGLESKGTGVKTVEMIYVSGLGKELDRRLGVLRRF*
Homology
[Close]
BLAST of Csa6G147550 vs. TrEMBL
Match: A0A0A0KEM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147550 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-35
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1  MGLKIRRMRVFRQKSKKQRHSDDLRFGFENGSENMGSSMEMKDEGLESKGTGVKTVEMIY 60
          MGLKIRRMRVFRQKSKKQRHSDDLRFGFENGSENMGSSMEMKDEGLESKGTGVKTVEMIY
Sbjct: 1  MGLKIRRMRVFRQKSKKQRHSDDLRFGFENGSENMGSSMEMKDEGLESKGTGVKTVEMIY 60

Query: 61 VSGLGKELDRRLGVLRRF 79
          VSGLGKELDRRLGVLRRF
Sbjct: 61 VSGLGKELDRRLGVLRRF 78

[Close]
BLAST of Csa6G147550 vs. NCBI nr
Match: gi|700191658|gb|KGN46862.1| (hypothetical protein Csa_6G147550 [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-35
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1  MGLKIRRMRVFRQKSKKQRHSDDLRFGFENGSENMGSSMEMKDEGLESKGTGVKTVEMIY 60
          MGLKIRRMRVFRQKSKKQRHSDDLRFGFENGSENMGSSMEMKDEGLESKGTGVKTVEMIY
Sbjct: 1  MGLKIRRMRVFRQKSKKQRHSDDLRFGFENGSENMGSSMEMKDEGLESKGTGVKTVEMIY 60

Query: 61 VSGLGKELDRRLGVLRRF 79
          VSGLGKELDRRLGVLRRF
Sbjct: 61 VSGLGKELDRRLGVLRRF 78

The following BLAST results are available for this feature:
BLAST of Csa6G147550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEM4_CUCSA1.5e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147550 PE=4 SV=1[more]
BLAST of Csa6G147550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191658|gb|KGN46862.1|2.1e-35100.00hypothetical protein Csa_6G147550 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G147550.1Csa6G147550.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G147550CSPI06G11730Wild cucumber (PI 183967)cpicuB314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G147550Watermelon (97103) v2cuwmbB419
Csa6G147550Watermelon (97103) v2cuwmbB426
Csa6G147550Watermelon (97103) v2cuwmbB456
Csa6G147550Wax gourdcuwgoB633
Csa6G147550Wax gourdcuwgoB636
Csa6G147550Cucumber (Chinese Long) v2cucuB115
Csa6G147550Cucumber (Chinese Long) v2cucuB168
Csa6G147550Cucumber (Gy14) v1cgycuB168
Csa6G147550Cucumber (Gy14) v1cgycuB440
Csa6G147550Cucumber (Gy14) v1cgycuB541
Csa6G147550Cucurbita maxima (Rimu)cmacuB268
Csa6G147550Cucurbita maxima (Rimu)cmacuB554
Csa6G147550Cucurbita maxima (Rimu)cmacuB631
Csa6G147550Cucurbita maxima (Rimu)cmacuB683
Csa6G147550Cucurbita moschata (Rifu)cmocuB544
Csa6G147550Cucurbita moschata (Rifu)cmocuB621
Csa6G147550Cucurbita moschata (Rifu)cmocuB672
Csa6G147550Cucurbita moschata (Rifu)cmocuB830
Csa6G147550Melon (DHL92) v3.5.1cumeB413
Csa6G147550Melon (DHL92) v3.5.1cumeB416
Csa6G147550Melon (DHL92) v3.5.1cumeB486
Csa6G147550Melon (DHL92) v3.5.1cumeB509
Csa6G147550Watermelon (Charleston Gray)cuwcgB426
Csa6G147550Watermelon (Charleston Gray)cuwcgB436
Csa6G147550Watermelon (Charleston Gray)cuwcgB465
Csa6G147550Watermelon (97103) v1cuwmB453
Csa6G147550Watermelon (97103) v1cuwmB506
Csa6G147550Watermelon (97103) v1cuwmB511
Csa6G147550Cucurbita pepo (Zucchini)cpecuB291
Csa6G147550Cucurbita pepo (Zucchini)cpecuB747
Csa6G147550Bottle gourd (USVL1VR-Ls)culsiB412
Csa6G147550Bottle gourd (USVL1VR-Ls)culsiB436
Csa6G147550Bottle gourd (USVL1VR-Ls)culsiB447
Csa6G147550Bottle gourd (USVL1VR-Ls)culsiB449
Csa6G147550Cucumber (Gy14) v2cgybcuB139
Csa6G147550Cucumber (Gy14) v2cgybcuB282
Csa6G147550Cucumber (Gy14) v2cgybcuB283
Csa6G147550Melon (DHL92) v3.6.1cumedB403
Csa6G147550Melon (DHL92) v3.6.1cumedB466
Csa6G147550Melon (DHL92) v3.6.1cumedB489
Csa6G147550Silver-seed gourdcarcuB0371
Csa6G147550Silver-seed gourdcarcuB0942