Csa6G147450 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G147450
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 10153854 .. 10154141 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCAACCTCATCCTTCCTCCTCCCTCTCTTTTCTCCTTCCGACGGTGTCAGTTATTCGTGGGAGACAAAAAAAATATGTGGGGCAATTTGGCGATACGGCGAGCCCGGGACAACATGAATAATGACGTGGGGCCAATCGACGGTGTGGGCGGATTCAGAGCAAACGAACAACGATGGCCGACTTGAAGCGAACAAACGAGAATGGTGGACTCGGAGCGAACGAACGGACGATGATGGCAGACTCAAAACGAACAGACTACAGTGGCGGACGTTATATACTGTGA

mRNA sequence

ATGCTTCAACCTCATCCTTCCTCCTCCCTCTCTTTTCTCCTTCCGACGGTGTCAAGCAAACGAACAACGATGGCCGACTTGAAGCGAACAAACGAGAATGGTGGACTCGGAGCGAACGAACGGACGATGATGGCAGACTCAAAACGAACAGACTACAGTGGCGGACGTTATATACTGTGA

Coding sequence (CDS)

ATGCTTCAACCTCATCCTTCCTCCTCCCTCTCTTTTCTCCTTCCGACGGTGTCAAGCAAACGAACAACGATGGCCGACTTGAAGCGAACAAACGAGAATGGTGGACTCGGAGCGAACGAACGGACGATGATGGCAGACTCAAAACGAACAGACTACAGTGGCGGACGTTATATACTGTGA

Protein sequence

MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL*
Homology
[Close]
BLAST of Csa6G147450 vs. TrEMBL
Match: A0A0A0KGG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147450 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 8.8e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 60
          MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL
Sbjct: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 59

[Close]
BLAST of Csa6G147450 vs. NCBI nr
Match: gi|700191647|gb|KGN46851.1| (hypothetical protein Csa_6G147450 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 60
          MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL
Sbjct: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 59

The following BLAST results are available for this feature:
BLAST of Csa6G147450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGG5_CUCSA8.8e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147450 PE=4 SV=1[more]
BLAST of Csa6G147450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191647|gb|KGN46851.1|1.3e-24100.00hypothetical protein Csa_6G147450 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G147450.1Csa6G147450.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G147450CSPI06G11610Wild cucumber (PI 183967)cpicuB314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G147450Melon (DHL92) v3.6.1cumedB403
Csa6G147450Melon (DHL92) v3.6.1cumedB466
Csa6G147450Silver-seed gourdcarcuB0371
Csa6G147450Silver-seed gourdcarcuB0734
Csa6G147450Watermelon (97103) v2cuwmbB419
Csa6G147450Watermelon (97103) v2cuwmbB426
Csa6G147450Watermelon (97103) v2cuwmbB456
Csa6G147450Wax gourdcuwgoB610
Csa6G147450Wax gourdcuwgoB633
Csa6G147450Wax gourdcuwgoB636
Csa6G147450Cucumber (Chinese Long) v2cucuB115
Csa6G147450Cucumber (Chinese Long) v2cucuB168
Csa6G147450Cucumber (Gy14) v1cgycuB168
Csa6G147450Cucumber (Gy14) v1cgycuB440
Csa6G147450Cucumber (Gy14) v1cgycuB541
Csa6G147450Cucurbita maxima (Rimu)cmacuB268
Csa6G147450Cucurbita maxima (Rimu)cmacuB554
Csa6G147450Cucurbita maxima (Rimu)cmacuB620
Csa6G147450Cucurbita maxima (Rimu)cmacuB683
Csa6G147450Cucurbita moschata (Rifu)cmocuB544
Csa6G147450Cucurbita moschata (Rifu)cmocuB612
Csa6G147450Cucurbita moschata (Rifu)cmocuB672
Csa6G147450Cucurbita moschata (Rifu)cmocuB830
Csa6G147450Melon (DHL92) v3.5.1cumeB430
Csa6G147450Melon (DHL92) v3.5.1cumeB486
Csa6G147450Watermelon (Charleston Gray)cuwcgB426
Csa6G147450Watermelon (Charleston Gray)cuwcgB436
Csa6G147450Watermelon (Charleston Gray)cuwcgB465
Csa6G147450Watermelon (97103) v1cuwmB453
Csa6G147450Watermelon (97103) v1cuwmB506
Csa6G147450Watermelon (97103) v1cuwmB511
Csa6G147450Cucurbita pepo (Zucchini)cpecuB291
Csa6G147450Cucurbita pepo (Zucchini)cpecuB756
Csa6G147450Bottle gourd (USVL1VR-Ls)culsiB412
Csa6G147450Bottle gourd (USVL1VR-Ls)culsiB436
Csa6G147450Bottle gourd (USVL1VR-Ls)culsiB447
Csa6G147450Bottle gourd (USVL1VR-Ls)culsiB449
Csa6G147450Cucumber (Gy14) v2cgybcuB139
Csa6G147450Cucumber (Gy14) v2cgybcuB282
Csa6G147450Cucumber (Gy14) v2cgybcuB283