CSPI06G11610 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G11610
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 10303243 .. 10303530 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCAACCTCATCCTTCCTCCTCCCTCTCTTTTCTCCTTCCGACGGTGTCAGTTATTCGTGGGAGACAAAAAAAATATGTGGGGCAATTTGGCGATACGGCGAGCCCGGGACAACATGAATAATGACGTGGGGCCAATCGACGGTGTGGGCGGATTCAGAGCAAACGAACAACGATGGCCGACTTGAAGCGAACAAACGAGAATGGTGGACTCGGAGCGAACGAACGGACGATGATGGCAGACTCAAAACGAACAGACTACAGTGGCGGACGTTATATACTGTGA

mRNA sequence

ATGCTTCAACCTCATCCTTCCTCCTCCCTCTCTTTTCTCCTTCCGACGGTGTCAAGCAAACGAACAACGATGGCCGACTTGAAGCGAACAAACGAGAATGGTGGACTCGGAGCGAACGAACGGACGATGATGGCAGACTCAAAACGAACAGACTACAGTGGCGGACGTTATATACTGTGA

Coding sequence (CDS)

ATGCTTCAACCTCATCCTTCCTCCTCCCTCTCTTTTCTCCTTCCGACGGTGTCAAGCAAACGAACAACGATGGCCGACTTGAAGCGAACAAACGAGAATGGTGGACTCGGAGCGAACGAACGGACGATGATGGCAGACTCAAAACGAACAGACTACAGTGGCGGACGTTATATACTGTGA
Homology
[Close]
BLAST of CSPI06G11610 vs. TrEMBL
Match: A0A0A0KGG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147450 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.4e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 60
          MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL
Sbjct: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 59

[Close]
BLAST of CSPI06G11610 vs. NCBI nr
Match: gi|700191647|gb|KGN46851.1| (hypothetical protein Csa_6G147450 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 6.3e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 60
          MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL
Sbjct: 1  MLQPHPSSSLSFLLPTVSSKRTTMADLKRTNENGGLGANERTMMADSKRTDYSGGRYIL 59

The following BLAST results are available for this feature:
BLAST of CSPI06G11610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G11610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGG5_CUCSA4.4e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147450 PE=4 SV=1[more]
BLAST of CSPI06G11610 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G11610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191647|gb|KGN46851.1|6.3e-24100.00hypothetical protein Csa_6G147450 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G11610.1CSPI06G11610.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G11610Csa6G147450Cucumber (Chinese Long) v2cpicuB314
CSPI06G11610CsaV3_6G014050Cucumber (Chinese Long) v3cpicucB364
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G11610Cucumber (Chinese Long) v3cpicucB338
CSPI06G11610Cucumber (Chinese Long) v3cpicucB366
CSPI06G11610Watermelon (97103) v2cpiwmbB443
CSPI06G11610Watermelon (97103) v2cpiwmbB450
CSPI06G11610Watermelon (97103) v2cpiwmbB480
CSPI06G11610Wax gourdcpiwgoB534
CSPI06G11610Wax gourdcpiwgoB615
CSPI06G11610Wax gourdcpiwgoB639
CSPI06G11610Wax gourdcpiwgoB643
CSPI06G11610Wild cucumber (PI 183967)cpicpiB128
CSPI06G11610Wild cucumber (PI 183967)cpicpiB186
CSPI06G11610Cucumber (Gy14) v1cgycpiB169
CSPI06G11610Cucumber (Gy14) v1cgycpiB463
CSPI06G11610Cucumber (Gy14) v1cgycpiB570
CSPI06G11610Cucurbita maxima (Rimu)cmacpiB272
CSPI06G11610Cucurbita maxima (Rimu)cmacpiB560
CSPI06G11610Cucurbita maxima (Rimu)cmacpiB625
CSPI06G11610Cucurbita maxima (Rimu)cmacpiB691
CSPI06G11610Cucurbita maxima (Rimu)cmacpiB860
CSPI06G11610Cucurbita moschata (Rifu)cmocpiB549
CSPI06G11610Cucurbita moschata (Rifu)cmocpiB618
CSPI06G11610Cucurbita moschata (Rifu)cmocpiB683
CSPI06G11610Cucurbita moschata (Rifu)cmocpiB840
CSPI06G11610Cucumber (Chinese Long) v2cpicuB286
CSPI06G11610Cucumber (Chinese Long) v2cpicuB316
CSPI06G11610Melon (DHL92) v3.5.1cpimeB417
CSPI06G11610Melon (DHL92) v3.5.1cpimeB486
CSPI06G11610Watermelon (Charleston Gray)cpiwcgB445
CSPI06G11610Watermelon (Charleston Gray)cpiwcgB457
CSPI06G11610Watermelon (Charleston Gray)cpiwcgB489
CSPI06G11610Watermelon (97103) v1cpiwmB468
CSPI06G11610Watermelon (97103) v1cpiwmB525
CSPI06G11610Watermelon (97103) v1cpiwmB529
CSPI06G11610Cucurbita pepo (Zucchini)cpecpiB293
CSPI06G11610Cucurbita pepo (Zucchini)cpecpiB759
CSPI06G11610Bottle gourd (USVL1VR-Ls)cpilsiB415
CSPI06G11610Bottle gourd (USVL1VR-Ls)cpilsiB441
CSPI06G11610Bottle gourd (USVL1VR-Ls)cpilsiB453
CSPI06G11610Bottle gourd (USVL1VR-Ls)cpilsiB456
CSPI06G11610Melon (DHL92) v3.6.1cpimedB412
CSPI06G11610Melon (DHL92) v3.6.1cpimedB475
CSPI06G11610Cucumber (Gy14) v2cgybcpiB142
CSPI06G11610Cucumber (Gy14) v2cgybcpiB288
CSPI06G11610Cucumber (Gy14) v2cgybcpiB289
CSPI06G11610Silver-seed gourdcarcpiB0188
CSPI06G11610Silver-seed gourdcarcpiB0374
CSPI06G11610Silver-seed gourdcarcpiB0750